; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025652 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025652
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold13:32295008..32297918
RNA-Seq ExpressionSpg025652
SyntenySpg025652
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN66193.1 hypothetical protein VITISV_013311 [Vitis vinifera]8.3e-3935.59Show/hide
Query:  KLKWFLEGLRINRYKTDFLGIGID--PCAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEA
        K ++  +G RI   K+    I I      + PK VTK IEK+ R FLW GG  ++  HL+KW  V +P +EGGLGI  I   N +LL KW  RY  E E 
Subjt:  KLKWFLEGLRINRYKTDFLGIGID--PCAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEA

Query:  LWRKVIATKFG----GARNPYKLGNHSISSSKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPN--N
        LW+ VI  K+G    G R     G + +    G WK I K   + + +ID +VGKG + LFW D W G+ +L   FP L+ L+  + A + E+W+ +   
Subjt:  LWRKVIATKFG----GARNPYKLGNHSISSSKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPN--N

Query:  GSWNLHLRRNLNEVEILEWAILSHHLSNFSIKDEEDSWSWHLDKSGIFSTGSLTKSLASSNPSNRTEFYKQLWKGPMPKKS
        G WNL L R+ N+ E+ +   + + L +F    EED+  W  + +G+F      K L  S+        +++W   +P KS
Subjt:  GSWNLHLRRNLNEVEILEWAILSHHLSNFSIKDEEDSWSWHLDKSGIFSTGSLTKSLASSNPSNRTEFYKQLWKGPMPKKS

KAG5574372.1 hypothetical protein H5410_054506 [Solanum commersonii]1.2e-4228.08Show/hide
Query:  MEAWWRANPLSGWPSHGFIHKLKGLKKELKQWNQQVFGQQSEKRNSLNLELATIDKNEEIGPLSETDKIRRAEIKADLISIAANEEVLWRQRCKLKWF--
        ++ WW    + G P   F  KLK LK+++K W+   FG+ + K+NSL  ELA +D  +    L+E + + RA +  +L  +A NEE  WRQ+ ++ W   
Subjt:  MEAWWRANPLSGWPSHGFIHKLKGLKKELKQWNQQVFGQQSEKRNSLNLELATIDKNEEIGPLSETDKIRRAEIKADLISIAANEEVLWRQRCKLKWF--

Query:  -----------------LEGLRIN------------------------------------------------------------RYKTDFLGIG------
                         + GL +N                                                            R+K+ ++ +G      
Subjt:  -----------------LEGLRIN------------------------------------------------------------RYKTDFLGIG------

Query:  ---IDPCA-------KAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGAR
           +D            PK + K + KL R+FLW+G  EK+G +L+KW  V     +GGLGI  +  +N SLL KW  R+  E  ALWR+ IA K+G   
Subjt:  ---IDPCA-------KAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGAR

Query:  NPYKLGNHSISSSKG--PWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPNNGSWNLHLRRNLNEVEILE
        N        ++ + G   WK+I ++     + +  RVG G KT FW + WLG  +L+  FP LY +SL++   I ++W P    W+L  RR LN+ E+  
Subjt:  NPYKLGNHSISSSKG--PWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPNNGSWNLHLRRNLNEVEILE

Query:  WAILSHHLSNF-SIKDEEDSWSWHLDKSGIFSTGSLTKSLASSNPSNRTEFYKQLWKGPMPKK
         A L H L+ F     E D   W L   G+F+  S      +++       +K +WK  +P K
Subjt:  WAILSHHLSNF-SIKDEEDSWSWHLDKSGIFSTGSLTKSLASSNPSNRTEFYKQLWKGPMPKK

TYK00226.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.1e-3835.91Show/hide
Query:  KAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGG---ARNPYKLGNHSISS
        KA   V K IEK +R FLW+   E    +L +WST+ TP  +GGLGI ++   N +LL KW  R+ +E ++LW ++I+ K+ G      P  +G +  SS
Subjt:  KAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGG---ARNPYKLGNHSISS

Query:  SKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPNNGSWNLHLRRNLNEVEILEWAILSHHLSNFSIK
         K PW+ I K   +  ++    +  G+   FW   W+ S SL   +P LY LS  + A I ELW+PN   WNLH RR LN+ EI  W  L   L   ++ 
Subjt:  SKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPNNGSWNLHLRRNLNEVEILEWAILSHHLSNFSIK

Query:  DEEDSWSWHLDKSGIFSTGSLTKSLASSNPS---NRTEFYKQLWKGPMPKKSNSLFGSL
          +++  W  +  G ++  S  + L S  P+   N   FY+ LWK  +PKK      SL
Subjt:  DEEDSWSWHLDKSGIFSTGSLTKSLASSNPS---NRTEFYKQLWKGPMPKKSNSLFGSL

TYK00493.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.7e-4235.02Show/hide
Query:  KAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGARNPYKLGNHSISSSKG
        +AP    K+IEKL+R FLW+G    KG HL+ WS V  P +EGGLGI  +   N +LL+KW  RYY EP +LWR++I  K+ G        N S SSSK 
Subjt:  KAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGARNPYKLGNHSISSSKG

Query:  PWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPNNGSWNLHLRRNLNEVEILEWAILSHHLSNFSIKDEE
        PW+SI     +  SN    +  GD+  FW   W     L T +P L+ LS+ KE+ I ++WN NN  W +  RR LN+ E+  W  +  +L         
Subjt:  PWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPNNGSWNLHLRRNLNEVEILEWAILSHHLSNFSIKDEE

Query:  DSWSWHLDKSGIFSTGSLTKSLASSNPSN-----RTEFYKQLWKGPMPKKSNSLFGSLVMLVSIQPKISKEEILEVISPQAAVVCDSRLQNPKPIFL
           +W  D    FS  S  KS  S  P       R +    +WK  +P K       LV     Q K++  E+  ++ P   V+C  + +    +FL
Subjt:  DSWSWHLDKSGIFSTGSLTKSLASSNPSN-----RTEFYKQLWKGPMPKKSNSLFGSLVMLVSIQPKISKEEILEVISPQAAVVCDSRLQNPKPIFL

TYK00493.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.4e-0835.64Show/hide
Query:  MEAWWRANPLSGWPSHGFIHKLKGLKKELKQWNQQVFGQQSEKRNSLNLELATIDKNEEIGPLSETDKIRRAEIKADLISIAANEEVLWRQRCKLKWFLE
        ME WW  +  +G P   FI +LK L   +K W ++ F   +  + ++  E+ +IDKNE   PLS  +  RR  +KA+L  ++  E   W QR K  W  E
Subjt:  MEAWWRANPLSGWPSHGFIHKLKGLKKELKQWNQQVFGQQSEKRNSLNLELATIDKNEEIGPLSETDKIRRAEIKADLISIAANEEVLWRQRCKLKWFLE

Query:  G
        G
Subjt:  G

TYK00493.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.7e-3935.07Show/hide
Query:  KLKWFLEGLRINRYKTDFLGIGID--PCAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEA
        K ++  +G RI   K+    I I      + PK VTK IEK+ R FLW GG  ++  HL+KW  V +P +EGGLGI  I   N +LL KW  RY  E E 
Subjt:  KLKWFLEGLRINRYKTDFLGIGID--PCAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEA

Query:  LWRKVIATKFG----GARNPYKLGNHSISSSKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPN--N
        LW+ VI  K+G    G R     G + +    G WK I K   + + +ID +VGKG + LFW D W  + +L   FP L+ L+ ++ A + E+W+ +   
Subjt:  LWRKVIATKFG----GARNPYKLGNHSISSSKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPN--N

Query:  GSWNLHLRRNLNEVEILEWAILSHHLSNFSIKDEEDSWSWHLDKSGIFSTGSLTKSLASSNPSNRTEFYKQLWKGPMPKKSNSLFGSL
        G WNL L R+ N+ E+ +   + + L +F    EED+  W  + +G+F      K L  S+        +++W   +P K + L G L
Subjt:  GSWNLHLRRNLNEVEILEWAILSHHLSNFSIKDEEDSWSWHLDKSGIFSTGSLTKSLASSNPSNRTEFYKQLWKGPMPKKSNSLFGSL

TrEMBL top hitse value%identityAlignment
A0A2N9F8S0 zf-RVT domain-containing protein2.4e-3927.74Show/hide
Query:  MEAWWRANPLSGWPSHGFIHKLKGLKKELKQWNQQVFGQQSEKRNSLNLELATIDKNEEIGPLSETDKIRRAEIKADLISIAANEEVLWRQRCKLKWFLE
        ++ WW +    G P +    KLK LK +LK+WN++VFG    KRN L  EL  +D   ++ PL+  +  ++A I ADL S +  EE+ WRQ+ +  W  E
Subjt:  MEAWWRANPLSGWPSHGFIHKLKGLKKELKQWNQQVFGQQSEKRNSLNLELATIDKNEEIGPLSETDKIRRAEIKADLISIAANEEVLWRQRCKLKWFLE

Query:  GLRINRYKTDFLGIGI-------DPCAKA-----------------------------------------------------------------------
        G +  ++   FL +GI       + C+                                                                         
Subjt:  GLRINRYKTDFLGIGI-------DPCAKA-----------------------------------------------------------------------

Query:  PKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGARNPYKLGNHSISSSKGPW
        P +V   +EKL R FLW G  E    HL+ WS + TP+  GGL I ++   N +LL KW  RY  E EALWR V+  K+G     +   + + S     W
Subjt:  PKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGARNPYKLGNHSISSSKGPW

Query:  KSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPNNG--SWNLHLRRNLNEVEILEWAILSHHLSNFSIKD-E
        K I +     +S+    VG G +  FW+D W G  +L   FP L+ +S  KEA + +L +  NG   W+ H  RN+N+ E+         L +  ++   
Subjt:  KSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPNNG--SWNLHLRRNLNEVEILEWAILSHHLSNFSIKD-E

Query:  EDSWSWHLDKSGIFSTGSLTKSLASSNPSNRTEF-YKQLWKGPMPKK
        ED   W    +  F+  +    L    PS+   F +K +WK  +P +
Subjt:  EDSWSWHLDKSGIFSTGSLTKSLASSNPSNRTEF-YKQLWKGPMPKK

A0A5D3BL61 LINE-1 retrotransposable element ORF2 protein2.3e-4235.02Show/hide
Query:  KAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGARNPYKLGNHSISSSKG
        +AP    K+IEKL+R FLW+G    KG HL+ WS V  P +EGGLGI  +   N +LL+KW  RYY EP +LWR++I  K+ G        N S SSSK 
Subjt:  KAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGARNPYKLGNHSISSSKG

Query:  PWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPNNGSWNLHLRRNLNEVEILEWAILSHHLSNFSIKDEE
        PW+SI     +  SN    +  GD+  FW   W     L T +P L+ LS+ KE+ I ++WN NN  W +  RR LN+ E+  W  +  +L         
Subjt:  PWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPNNGSWNLHLRRNLNEVEILEWAILSHHLSNFSIKDEE

Query:  DSWSWHLDKSGIFSTGSLTKSLASSNPSN-----RTEFYKQLWKGPMPKKSNSLFGSLVMLVSIQPKISKEEILEVISPQAAVVCDSRLQNPKPIFL
           +W  D    FS  S  KS  S  P       R +    +WK  +P K       LV     Q K++  E+  ++ P   V+C  + +    +FL
Subjt:  DSWSWHLDKSGIFSTGSLTKSLASSNPSN-----RTEFYKQLWKGPMPKKSNSLFGSLVMLVSIQPKISKEEILEVISPQAAVVCDSRLQNPKPIFL

A0A5D3BL61 LINE-1 retrotransposable element ORF2 protein1.7e-0835.64Show/hide
Query:  MEAWWRANPLSGWPSHGFIHKLKGLKKELKQWNQQVFGQQSEKRNSLNLELATIDKNEEIGPLSETDKIRRAEIKADLISIAANEEVLWRQRCKLKWFLE
        ME WW  +  +G P   FI +LK L   +K W ++ F   +  + ++  E+ +IDKNE   PLS  +  RR  +KA+L  ++  E   W QR K  W  E
Subjt:  MEAWWRANPLSGWPSHGFIHKLKGLKKELKQWNQQVFGQQSEKRNSLNLELATIDKNEEIGPLSETDKIRRAEIKADLISIAANEEVLWRQRCKLKWFLE

Query:  G
        G
Subjt:  G

A0A5D3BL61 LINE-1 retrotransposable element ORF2 protein1.8e-3935.07Show/hide
Query:  KLKWFLEGLRINRYKTDFLGIGID--PCAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEA
        K ++  +G RI   K+    I I      + PK VTK IEK+ R FLW GG  ++  HL+KW  V +P +EGGLGI  I   N +LL KW  RY  E E 
Subjt:  KLKWFLEGLRINRYKTDFLGIGID--PCAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEA

Query:  LWRKVIATKFG----GARNPYKLGNHSISSSKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPN--N
        LW+ VI  K+G    G R     G + +    G WK I K   + + +ID +VGKG + LFW D W  + +L   FP L+ L+ ++ A + E+W+ +   
Subjt:  LWRKVIATKFG----GARNPYKLGNHSISSSKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPN--N

Query:  GSWNLHLRRNLNEVEILEWAILSHHLSNFSIKDEEDSWSWHLDKSGIFSTGSLTKSLASSNPSNRTEFYKQLWKGPMPKKSNSLFGSL
        G WNL L R+ N+ E+ +   + + L +F    EED+  W  + +G+F      K L  S+        +++W   +P K + L G L
Subjt:  GSWNLHLRRNLNEVEILEWAILSHHLSNFSIKDEEDSWSWHLDKSGIFSTGSLTKSLASSNPSNRTEFYKQLWKGPMPKKSNSLFGSL

A0A5D3BPP1 LINE-1 retrotransposable element ORF2 protein5.3e-3935.91Show/hide
Query:  KAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGG---ARNPYKLGNHSISS
        KA   V K IEK +R FLW+   E    +L +WST+ TP  +GGLGI ++   N +LL KW  R+ +E ++LW ++I+ K+ G      P  +G +  SS
Subjt:  KAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGG---ARNPYKLGNHSISS

Query:  SKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPNNGSWNLHLRRNLNEVEILEWAILSHHLSNFSIK
         K PW+ I K   +  ++    +  G+   FW   W+ S SL   +P LY LS  + A I ELW+PN   WNLH RR LN+ EI  W  L   L   ++ 
Subjt:  SKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPNNGSWNLHLRRNLNEVEILEWAILSHHLSNFSIK

Query:  DEEDSWSWHLDKSGIFSTGSLTKSLASSNPS---NRTEFYKQLWKGPMPKKSNSLFGSL
          +++  W  +  G ++  S  + L S  P+   N   FY+ LWK  +PKK      SL
Subjt:  DEEDSWSWHLDKSGIFSTGSLTKSLASSNPS---NRTEFYKQLWKGPMPKKSNSLFGSL

A5BZR6 Reverse transcriptase domain-containing protein4.0e-3935.59Show/hide
Query:  KLKWFLEGLRINRYKTDFLGIGID--PCAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEA
        K ++  +G RI   K+    I I      + PK VTK IEK+ R FLW GG  ++  HL+KW  V +P +EGGLGI  I   N +LL KW  RY  E E 
Subjt:  KLKWFLEGLRINRYKTDFLGIGID--PCAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEA

Query:  LWRKVIATKFG----GARNPYKLGNHSISSSKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPN--N
        LW+ VI  K+G    G R     G + +    G WK I K   + + +ID +VGKG + LFW D W G+ +L   FP L+ L+  + A + E+W+ +   
Subjt:  LWRKVIATKFG----GARNPYKLGNHSISSSKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPN--N

Query:  GSWNLHLRRNLNEVEILEWAILSHHLSNFSIKDEEDSWSWHLDKSGIFSTGSLTKSLASSNPSNRTEFYKQLWKGPMPKKS
        G WNL L R+ N+ E+ +   + + L +F    EED+  W  + +G+F      K L  S+        +++W   +P KS
Subjt:  GSWNLHLRRNLNEVEILEWAILSHHLSNFSIKDEEDSWSWHLDKSGIFSTGSLTKSLASSNPSNRTEFYKQLWKGPMPKKS

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657505.7e-1428.06Show/hide
Query:  PKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKF--GGARNP-YKLGNHSISSSK
        P+ +   +++L R FLW    EKK  HL+KWS V +P  EGGLG+      N +L++K   R  +E  +LW  V+  K+  G  R+  + +   S SS+ 
Subjt:  PKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKF--GGARNP-YKLGNHSISSSK

Query:  GPWKSIH-KLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIV---ELWNPNNGSWNL----HLRRNLNEVEILEWAILSHHL
          W+SI   L+  V   +    G G +  FW D W+    L      L N     +   V   +LW P  G W+         N   +E L   +L    
Subjt:  GPWKSIH-KLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIV---ELWNPNNGSWNL----HLRRNLNEVEILEWAILSHHL

Query:  SNFSIKDEEDSWSWHLDKSGIFSTGSLTKSLASSN--PSNRTEFYKQLWKGPMPKKSNSLFGSLVMLVSIQPKISKEE
            +    D  SW   + G FS  S  + L        N   F+  LWK  +P++      + + LV  Q  +++EE
Subjt:  SNFSIKDEEDSWSWHLDKSGIFSTGSLTKSLASSN--PSNRTEFYKQLWKGPMPKKSNSLFGSLVMLVSIQPKISKEE

P93295 Uncharacterized mitochondrial protein AtMg003103.1e-0422.63Show/hide
Query:  CAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTV-QTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGARNPYKLGNHSISS
        C +  K + K +      F W     K+    + W  + ++  D+GGLG  D+   N +LLAK + R   +P  L  +++ +++    +  +    +  S
Subjt:  CAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTV-QTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGARNPYKLGNHSISS

Query:  SKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWL
            W+SI   +  +   +   +G G  T  W D W+
Subjt:  SKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWL

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.1e-0437.04Show/hide
Query:  KAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKN
        + P    K+I+ +   FLW G         + WS V TP DEGGLGI  + + N
Subjt:  KAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKN

AT4G29090.1 Ribonuclease H-like superfamily protein1.2e-1433.33Show/hide
Query:  CAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGARNPYKLGNHSISSS
        C   PK V K I  +   F WR   E KG H   W  +     EGG+G  DI   N++LL K   R    PE+L  KV  +++    +P  L     S  
Subjt:  CAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGARNPYKLGNHSISSS

Query:  KGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGS
           WKSIH  Q  +     + VG G+  + W   WL S
Subjt:  KGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGS

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.2e-0522.63Show/hide
Query:  CAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTV-QTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGARNPYKLGNHSISS
        C +  K + K +      F W     K+    + W  + ++  D+GGLG  D+   N +LLAK + R   +P  L  +++ +++    +  +    +  S
Subjt:  CAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTV-QTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGARNPYKLGNHSISS

Query:  SKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWL
            W+SI   +  +   +   +G G  T  W D W+
Subjt:  SKGPWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCATGGTGGCGTGCTAATCCTTTATCTGGTTGGCCAAGTCACGGATTCATTCACAAACTAAAAGGCCTCAAAAAAGAGTTGAAGCAGTGGAATCAACAAGTTTT
TGGCCAACAATCTGAAAAAAGAAACAGTCTTAATCTTGAGCTGGCAACCATAGACAAAAATGAGGAAATTGGGCCTTTATCCGAGACAGACAAAATCAGAAGGGCAGAGA
TCAAGGCTGATCTTATTTCTATTGCGGCAAATGAAGAGGTTTTATGGCGCCAACGTTGCAAATTAAAATGGTTCTTGGAAGGGCTGAGAATCAATCGCTATAAGACTGAT
TTTTTGGGCATTGGTATTGATCCTTGTGCAAAAGCCCCCAAAAAAGTCACCAAGGATATTGAAAAGCTCTACCGTTTATTTCTATGGAGAGGCGGCATTGAGAAGAAAGG
TTGTCACCTTTTAAAGTGGTCCACGGTCCAAACCCCAGTTGATGAAGGAGGTCTAGGCATCTATGATATTCACCAGAAAAATGTCTCTCTCTTGGCAAAATGGACTAGGA
GATACTACAAAGAGCCGGAAGCCTTATGGAGGAAAGTCATTGCTACAAAGTTTGGAGGAGCTCGAAATCCTTATAAGTTGGGAAACCATTCCATTAGTTCCTCCAAAGGC
CCTTGGAAATCAATCCATAAATTGCAGCATTTCGTTTACAGCAACATTGATTCCAGAGTTGGGAAAGGTGATAAAACTCTATTTTGGGAAGACATCTGGCTTGGTTCTTC
TTCCCTCAAGACAAAGTTCCCATCGTTGTATAATTTATCCCTTAAAAAAGAAGCTTTTATTGTTGAATTATGGAATCCTAACAATGGGTCTTGGAATCTACATTTGAGAA
GAAATTTAAATGAAGTTGAAATTCTTGAATGGGCTATCCTATCACACCACCTCTCAAATTTCTCCATCAAAGATGAGGAGGACTCATGGTCATGGCATCTTGATAAATCT
GGTATCTTCTCTACGGGCTCCCTCACAAAAAGTTTGGCATCCTCCAATCCTTCCAATAGAACAGAGTTTTATAAACAACTTTGGAAGGGTCCCATGCCGAAAAAGTCAAA
TTCTTTATTTGGGAGCTTAGTCATGCTTGTATCAATACAGCCGAAAATATCCAAAGAAGAAATCCTGGAAGTTATCTCTCCCCAAGCTGCTGTTGTATGTGATTCAAGGC
TGCAGAATCCCAAGCCCATCTTTTTGGCTGTTGTGAATACGCCTTTGTTTTTTGAGACTATCTTCAACAAGCTTTTGAGTGGCAATTTGCTCAACCGGGTGATATCATCT
CCCTTATCTCCTATACTCTTCTTGGTCATCCCTTTAGAAAGGCTAAAAAGATTATATGGCAGAATTTTTTGTACGCTTTCTCATGGAACCTATGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCATGGTGGCGTGCTAATCCTTTATCTGGTTGGCCAAGTCACGGATTCATTCACAAACTAAAAGGCCTCAAAAAAGAGTTGAAGCAGTGGAATCAACAAGTTTT
TGGCCAACAATCTGAAAAAAGAAACAGTCTTAATCTTGAGCTGGCAACCATAGACAAAAATGAGGAAATTGGGCCTTTATCCGAGACAGACAAAATCAGAAGGGCAGAGA
TCAAGGCTGATCTTATTTCTATTGCGGCAAATGAAGAGGTTTTATGGCGCCAACGTTGCAAATTAAAATGGTTCTTGGAAGGGCTGAGAATCAATCGCTATAAGACTGAT
TTTTTGGGCATTGGTATTGATCCTTGTGCAAAAGCCCCCAAAAAAGTCACCAAGGATATTGAAAAGCTCTACCGTTTATTTCTATGGAGAGGCGGCATTGAGAAGAAAGG
TTGTCACCTTTTAAAGTGGTCCACGGTCCAAACCCCAGTTGATGAAGGAGGTCTAGGCATCTATGATATTCACCAGAAAAATGTCTCTCTCTTGGCAAAATGGACTAGGA
GATACTACAAAGAGCCGGAAGCCTTATGGAGGAAAGTCATTGCTACAAAGTTTGGAGGAGCTCGAAATCCTTATAAGTTGGGAAACCATTCCATTAGTTCCTCCAAAGGC
CCTTGGAAATCAATCCATAAATTGCAGCATTTCGTTTACAGCAACATTGATTCCAGAGTTGGGAAAGGTGATAAAACTCTATTTTGGGAAGACATCTGGCTTGGTTCTTC
TTCCCTCAAGACAAAGTTCCCATCGTTGTATAATTTATCCCTTAAAAAAGAAGCTTTTATTGTTGAATTATGGAATCCTAACAATGGGTCTTGGAATCTACATTTGAGAA
GAAATTTAAATGAAGTTGAAATTCTTGAATGGGCTATCCTATCACACCACCTCTCAAATTTCTCCATCAAAGATGAGGAGGACTCATGGTCATGGCATCTTGATAAATCT
GGTATCTTCTCTACGGGCTCCCTCACAAAAAGTTTGGCATCCTCCAATCCTTCCAATAGAACAGAGTTTTATAAACAACTTTGGAAGGGTCCCATGCCGAAAAAGTCAAA
TTCTTTATTTGGGAGCTTAGTCATGCTTGTATCAATACAGCCGAAAATATCCAAAGAAGAAATCCTGGAAGTTATCTCTCCCCAAGCTGCTGTTGTATGTGATTCAAGGC
TGCAGAATCCCAAGCCCATCTTTTTGGCTGTTGTGAATACGCCTTTGTTTTTTGAGACTATCTTCAACAAGCTTTTGAGTGGCAATTTGCTCAACCGGGTGATATCATCT
CCCTTATCTCCTATACTCTTCTTGGTCATCCCTTTAGAAAGGCTAAAAAGATTATATGGCAGAATTTTTTGTACGCTTTCTCATGGAACCTATGGCTAG
Protein sequenceShow/hide protein sequence
MEAWWRANPLSGWPSHGFIHKLKGLKKELKQWNQQVFGQQSEKRNSLNLELATIDKNEEIGPLSETDKIRRAEIKADLISIAANEEVLWRQRCKLKWFLEGLRINRYKTD
FLGIGIDPCAKAPKKVTKDIEKLYRLFLWRGGIEKKGCHLLKWSTVQTPVDEGGLGIYDIHQKNVSLLAKWTRRYYKEPEALWRKVIATKFGGARNPYKLGNHSISSSKG
PWKSIHKLQHFVYSNIDSRVGKGDKTLFWEDIWLGSSSLKTKFPSLYNLSLKKEAFIVELWNPNNGSWNLHLRRNLNEVEILEWAILSHHLSNFSIKDEEDSWSWHLDKS
GIFSTGSLTKSLASSNPSNRTEFYKQLWKGPMPKKSNSLFGSLVMLVSIQPKISKEEILEVISPQAAVVCDSRLQNPKPIFLAVVNTPLFFETIFNKLLSGNLLNRVISS
PLSPILFLVIPLERLKRLYGRIFCTLSHGTYG