; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025671 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025671
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold13:32337029..32339122
RNA-Seq ExpressionSpg025671
SyntenySpg025671
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.0e-1643.24Show/hide
Query:  KKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLNDEIEALIRNGYL
        K++R+ D  +G     R R  + D  +KFE+YT T++P EQ+LMEIKN  LL  P ++ ++   R K +YCLFH DH H+T++C  L +E+E LI  GYL
Subjt:  KKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLNDEIEALIRNGYL

Query:  KEFTTKAEGDQ
        KE+  + +  Q
Subjt:  KEFTTKAEGDQ

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.5e-1945.95Show/hide
Query:  KKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLNDEIEALIRNGYL
        K++R+ D  +G     R R  + D  +KFE+YTPT++P EQ+LMEIK+  LL  P ++K++   R K +YCLFHRDH H+T++C  L +E+E LIR GYL
Subjt:  KKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLNDEIEALIRNGYL

Query:  KEFTTKAEGDQ
        KE+  + +  Q
Subjt:  KEFTTKAEGDQ

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]6.8e-1738.51Show/hide
Query:  LKSKKSEREHKRSSSSDHDTRKDKKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDH
        L+ K+++++ +RS      ++ +K+ R                 + D  +KFE+YTPT++P EQ+LMEIK+  LL  P  +K+ P+ R K +YCLFHRDH
Subjt:  LKSKKSEREHKRSSSSDHDTRKDKKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDH

Query:  VHSTRNCIQLNDEIEALIRNGYLKEF------TTKAEGDQRWPRPTRD
         H+T +C  L +E+E LIR GYLKE+      T   E D +   PTR+
Subjt:  VHSTRNCIQLNDEIEALIRNGYLKEF------TTKAEGDQRWPRPTRD

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]4.0e-1744.14Show/hide
Query:  KKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLNDEIEALIRNGYL
        K++R+ D  +G     R R  + D  +KFE+YTPT++P EQ+LMEIK+  LL  P ++K     R K +YCLFHRDH H+T++   L +E+E LIR GYL
Subjt:  KKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLNDEIEALIRNGYL

Query:  KEFTTKAEGDQ
        +E+  + +  Q
Subjt:  KEFTTKAEGDQ

XP_023891919.1 uncharacterized protein LOC112003925 [Quercus suber]3.7e-1538.3Show/hide
Query:  RKDKKQRTDDHGRGRLDHGRGRPDRGDYL---------KKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLN
        R++K ++ +     R D GR RP  GD           ++F  +TP + P +QILM+IK+   L  P KLK +P+ R + +YC FHRDH H T +C  L 
Subjt:  RKDKKQRTDDHGRGRLDHGRGRPDRGDYL---------KKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLN

Query:  DEIEALIRNGYLKEFTTKAEGDQRWPRPTRDDPGKDKGGPQ
         +IEALIR G L++F +K   D   P P    P +D   P+
Subjt:  DEIEALIRNGYLKEFTTKAEGDQRWPRPTRDDPGKDKGGPQ

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128059.5e-1743.24Show/hide
Query:  KKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLNDEIEALIRNGYL
        K++R+ D  +G     R R  + D  +KFE+YT T++P EQ+LMEIKN  LL  P ++ ++   R K +YCLFH DH H+T++C  L +E+E LI  GYL
Subjt:  KKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLNDEIEALIRNGYL

Query:  KEFTTKAEGDQ
        KE+  + +  Q
Subjt:  KEFTTKAEGDQ

A0A6J1DWY0 uncharacterized protein LOC1110252931.2e-1945.95Show/hide
Query:  KKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLNDEIEALIRNGYL
        K++R+ D  +G     R R  + D  +KFE+YTPT++P EQ+LMEIK+  LL  P ++K++   R K +YCLFHRDH H+T++C  L +E+E LIR GYL
Subjt:  KKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLNDEIEALIRNGYL

Query:  KEFTTKAEGDQ
        KE+  + +  Q
Subjt:  KEFTTKAEGDQ

A0A6J1DYL6 uncharacterized protein LOC1110257851.9e-1744.14Show/hide
Query:  KKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLNDEIEALIRNGYL
        K++R+ D  +G     R R  + D  +KFE+YTPT++P EQ+LMEIK+  LL  P ++K     R K +YCLFHRDH H+T++   L +E+E LIR GYL
Subjt:  KKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLNDEIEALIRNGYL

Query:  KEFTTKAEGDQ
        +E+  + +  Q
Subjt:  KEFTTKAEGDQ

A0A6J1DZ52 uncharacterized protein LOC1110256123.3e-1738.51Show/hide
Query:  LKSKKSEREHKRSSSSDHDTRKDKKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDH
        L+ K+++++ +RS      ++ +K+ R                 + D  +KFE+YTPT++P EQ+LMEIK+  LL  P  +K+ P+ R K +YCLFHRDH
Subjt:  LKSKKSEREHKRSSSSDHDTRKDKKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDH

Query:  VHSTRNCIQLNDEIEALIRNGYLKEF------TTKAEGDQRWPRPTRD
         H+T +C  L +E+E LIR GYLKE+      T   E D +   PTR+
Subjt:  VHSTRNCIQLNDEIEALIRNGYLKEF------TTKAEGDQRWPRPTRD

A0A7N2LNH8 Ribonuclease H2.0e-1439.52Show/hide
Query:  TRKDKKQRTDDHGRGRLDHGRGRPDRGDYLK---------KFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQL
        +R+D+ ++ D     R D GR +   GD  +         +F  +TP + P +Q+LM+IK+   L  P KLKS+P  R + +YC FHRDH H T +C  L
Subjt:  TRKDKKQRTDDHGRGRLDHGRGRPDRGDYLK---------KFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQL

Query:  NDEIEALIRNGYLKEFTTKAEGDQ
          +IEALIR G L++F  K   DQ
Subjt:  NDEIEALIRNGYLKEFTTKAEGDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTAGCCGCCCCGGTTTCACCTAGTTTGTCTCGAAACACCTCCGAATTCCTAAAAACCCTAGAAGCACGAGCAGGCCGAGGAGCCGAGGCCGAGGAGAATAGGCC
GAGGGGCCGAGGCCAAGGAGAGGATTCTGATGCCAAAATTGCCGCCCTTGAGGATAAGGTGAAGGGAATGAATCAGAGTTTGTCCAGAATACTCCAAATCCTGGATAAAC
CCGGCCCTAGCACCAAACTCCATGAGGGGGGCTTGATTAGAGACCCAAAGAAGGGGAAGGAGCCAGTGGAGTACGTGGATGAATCAGAGACAGAATCGAAAGGAAAGGAG
ACCAACAGCGCAACCAGCAAGGTCAGGGGGCTGAAGCATGCAGAGCGCACAGTACTGAGGAGCCTAGAGCCAAGTACCAGCCGTCGAACAGACCTGAGAAATCTGATCGA
GGAAAAGCGCAGGAGTGCCAAGACTGTCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCAGAGGCCGAGGCAAGGTTGGCCGAGGCTGAGGCCA
AGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTCGCAGAGGAGTTGCTCAAGTCAAAGAAGTCAGAACGTGAACACAAGAGGTCTTCTTCATCTGACCACGACACTAGG
AAAGATAAAAAGCAGCGGACCGACGACCATGGTCGAGGCCGACTAGACCATGGCCGAGGCCGACCAGACCGAGGCGACTACTTGAAGAAGTTTGAAAGGTACACCCCTAC
TTCGATCCCACAAGAGCAGATCTTGATGGAGATAAAGAATACAAACCTGCTCAACGTGCCTAGAAAGCTGAAGTCAAACCCTGATAACAGAGACAAAAGCCAGTATTGTC
TCTTTCATCGAGATCATGTACATTCAACCAGGAACTGCATTCAGCTAAATGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAG
GGAGACCAGAGGTGGCCGAGGCCAACCAGAGACGACCCAGGAAAAGACAAGGGTGGACCTCAACTGGAAATTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTAGCCGCCCCGGTTTCACCTAGTTTGTCTCGAAACACCTCCGAATTCCTAAAAACCCTAGAAGCACGAGCAGGCCGAGGAGCCGAGGCCGAGGAGAATAGGCC
GAGGGGCCGAGGCCAAGGAGAGGATTCTGATGCCAAAATTGCCGCCCTTGAGGATAAGGTGAAGGGAATGAATCAGAGTTTGTCCAGAATACTCCAAATCCTGGATAAAC
CCGGCCCTAGCACCAAACTCCATGAGGGGGGCTTGATTAGAGACCCAAAGAAGGGGAAGGAGCCAGTGGAGTACGTGGATGAATCAGAGACAGAATCGAAAGGAAAGGAG
ACCAACAGCGCAACCAGCAAGGTCAGGGGGCTGAAGCATGCAGAGCGCACAGTACTGAGGAGCCTAGAGCCAAGTACCAGCCGTCGAACAGACCTGAGAAATCTGATCGA
GGAAAAGCGCAGGAGTGCCAAGACTGTCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCAGAGGCCGAGGCAAGGTTGGCCGAGGCTGAGGCCA
AGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTCGCAGAGGAGTTGCTCAAGTCAAAGAAGTCAGAACGTGAACACAAGAGGTCTTCTTCATCTGACCACGACACTAGG
AAAGATAAAAAGCAGCGGACCGACGACCATGGTCGAGGCCGACTAGACCATGGCCGAGGCCGACCAGACCGAGGCGACTACTTGAAGAAGTTTGAAAGGTACACCCCTAC
TTCGATCCCACAAGAGCAGATCTTGATGGAGATAAAGAATACAAACCTGCTCAACGTGCCTAGAAAGCTGAAGTCAAACCCTGATAACAGAGACAAAAGCCAGTATTGTC
TCTTTCATCGAGATCATGTACATTCAACCAGGAACTGCATTCAGCTAAATGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAG
GGAGACCAGAGGTGGCCGAGGCCAACCAGAGACGACCCAGGAAAAGACAAGGGTGGACCTCAACTGGAAATTCATTGA
Protein sequenceShow/hide protein sequence
MLLAAPVSPSLSRNTSEFLKTLEARAGRGAEAEENRPRGRGQGEDSDAKIAALEDKVKGMNQSLSRILQILDKPGPSTKLHEGGLIRDPKKGKEPVEYVDESETESKGKE
TNSATSKVRGLKHAERTVLRSLEPSTSRRTDLRNLIEEKRRSAKTVESEARAAEAEARAAEAEAEARLAEAEAKKDNLPWKTELLAEELLKSKKSEREHKRSSSSDHDTR
KDKKQRTDDHGRGRLDHGRGRPDRGDYLKKFERYTPTSIPQEQILMEIKNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHVHSTRNCIQLNDEIEALIRNGYLKEFTTKAE
GDQRWPRPTRDDPGKDKGGPQLEIH