; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025717 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025717
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold13:30804972..30812398
RNA-Seq ExpressionSpg025717
SyntenySpg025717
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063075.1 hypothetical protein E6C27_scaffold468G001930 [Cucumis melo var. makuwa]7.7e-1827.92Show/hide
Query:  IHQGTSIMWHASLPSRNDKAEILEDVKGLSFSSTSFFISLRSCYLSSCHGNFMTIEAYSPCRFSPPEVSYFCADNVISNFRRHAALSMWKSIHGKI----
        I +G   +W   L S + K       +G+   ++   +S     LS      + + A++      PE S +  + V+SNF +  AL MW+ I  KI    
Subjt:  IHQGTSIMWHASLPSRNDKAEILEDVKGLSFSSTSFFISLRSCYLSSCHGNFMTIEAYSPCRFSPPEVSYFCADNVISNFRRHAALSMWKSIHGKI----

Query:  ---------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEEKKLHLKKALSVESRVAEEKDVLQKRLACSVSEVSE
                 E+  +   + K   + L  L+E++  Y ++   +  +QSS SA+L    +  QL EK   +K+AL++  ++  +  V+Q+R A       E
Subjt:  ---------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEEKKLHLKKALSVESRVAEEKDVLQKRLACSVSEVSE

Query:  LKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLSTLRGLMEGTRNELKELQW
        L  +  ELE +L++   ESE+LS L  EK + ++++ L VS+++ EI ++E  P I+   ++ L+T+R  ME  R E K  +W
Subjt:  LKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLSTLRGLMEGTRNELKELQW

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]3.4e-1829.46Show/hide
Query:  LSSCHGNF--MTIEAYSPCRFSPPEVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRRE
        +SS H +   + + A++      PE S +  +NV+SNF +  AL MW+ I  KI             E+  +   + K   + L  L+E++  Y ++   
Subjt:  LSSCHGNF--MTIEAYSPCRFSPPEVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRRE

Query:  YLGMQSSLSAYLTPQIRDIQLEEKKLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQ
        +  +QSS SA L    +  QL EK   +K+ L++  ++  +  V+Q+R A       EL  +  ELE +L++   ESE+LS L  EK + +D++ L V++
Subjt:  YLGMQSSLSAYLTPQIRDIQLEEKKLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQ

Query:  IRKEIGSVECAPTISTSDVQTLSTLRGLMEGTRNELKELQW
        ++ E+ ++E  P I+   ++ L+T+R  ME  R E K  +W
Subjt:  IRKEIGSVECAPTISTSDVQTLSTLRGLMEGTRNELKELQW

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]7.1e-2437.9Show/hide
Query:  EVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEEK
        E+S+FC DN+IS+ RR  A+++ +S+  KI             EM KIF A+A + +NNL  L+E V GYFQ    +  M+SS+   L    +D QL E 
Subjt:  EVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEEK

Query:  KLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLST
        K  +K     E+R+ +E   +Q+RLA        L AK  +LEAKLK    ES KLS ++S+ E +L +++  +S+  +EI  ++CA  I  +D + L  
Subjt:  KLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLST

Query:  LRGLMEGTRNELKELQWNP
        LR  +E T  ELK L+W P
Subjt:  LRGLMEGTRNELKELQWNP

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]6.5e-2535.93Show/hide
Query:  IEAYSPCRFSPPEVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYL
        +E   P   S  E+S+FCAD++IS+ RR AA+++W+++  KI             EM KIF A+A + ++NL  L+E V GYFQ    +  + SS   +L
Subjt:  IEAYSPCRFSPPEVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYL

Query:  TPQIRDIQLEEKKLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAP
            +D+QL E K  +K     E+R+  E +  ++RL       + L AK  +LEAKLK    ES KLS ++ + + +L +++  +S+  +EI  +ECAP
Subjt:  TPQIRDIQLEEKKLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAP

Query:  TISTSDVQTLSTLRGLMEGTRNELKELQWNP
         +   D + LSTLR  +E T  ELK  +W P
Subjt:  TISTSDVQTLSTLRGLMEGTRNELKELQWNP

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]3.0e-1443.64Show/hide
Query:  MVHFTELSDNGKKILVVLLDKDQPIKSGTILPIE----TSITESNLELDKSHFLSEWFVERTQGQNSSTKVWILRSSLHGKKSNDNPKPTLGRRIIENQL
        MVHFTE SD+ K+ L++L D DQ ++ G ILP+      +I +S +  D   FL +W  ER    NSS K W L SS+H K  N++P+ TLGRRII +  
Subjt:  MVHFTELSDNGKKILVVLLDKDQPIKSGTILPIE----TSITESNLELDKSHFLSEWFVERTQGQNSSTKVWILRSSLHGKKSNDNPKPTLGRRIIENQL

Query:  IHQGTSIMWH
        I  G  +  H
Subjt:  IHQGTSIMWH

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.4e-2438.36Show/hide
Query:  EVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEEK
        E+S+FC DN+IS+ RR  A+++ +S+  KI             EM KIF A+A + +NNL  L+E V GYFQ    +  M+SS+   L    +D QL E 
Subjt:  EVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEEK

Query:  KLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLST
        K  +K     E+R+ +E   +Q+RLA        L AK  +LEAKLK    ES KLS ++S+ E +L +++  +S+  +EI  ++CA  I  +D + LS 
Subjt:  KLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLST

Query:  LRGLMEGTRNELKELQWNP
        LR  +E T  ELK L+W P
Subjt:  LRGLMEGTRNELKELQWNP

TrEMBL top hitse value%identityAlignment
A0A5A7SJ85 Uncharacterized protein7.0e-2538.36Show/hide
Query:  EVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEEK
        E+S+FC DN+IS+ RR  A+++ +S+  KI             EM KIF A+A + +NNL  L+E V GYFQ    +  M+SS+   L    +D QL E 
Subjt:  EVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEEK

Query:  KLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLST
        K  +K     E+R+ +E   +Q+RLA        L AK  +LEAKLK    ES KLS ++S+ E +L +++  +S+  +EI  ++CA  I  +D + LS 
Subjt:  KLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLST

Query:  LRGLMEGTRNELKELQWNP
        LR  +E T  ELK L+W P
Subjt:  LRGLMEGTRNELKELQWNP

A0A5A7VAY8 Uncharacterized protein3.7e-1827.92Show/hide
Query:  IHQGTSIMWHASLPSRNDKAEILEDVKGLSFSSTSFFISLRSCYLSSCHGNFMTIEAYSPCRFSPPEVSYFCADNVISNFRRHAALSMWKSIHGKI----
        I +G   +W   L S + K       +G+   ++   +S     LS      + + A++      PE S +  + V+SNF +  AL MW+ I  KI    
Subjt:  IHQGTSIMWHASLPSRNDKAEILEDVKGLSFSSTSFFISLRSCYLSSCHGNFMTIEAYSPCRFSPPEVSYFCADNVISNFRRHAALSMWKSIHGKI----

Query:  ---------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEEKKLHLKKALSVESRVAEEKDVLQKRLACSVSEVSE
                 E+  +   + K   + L  L+E++  Y ++   +  +QSS SA+L    +  QL EK   +K+AL++  ++  +  V+Q+R A       E
Subjt:  ---------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEEKKLHLKKALSVESRVAEEKDVLQKRLACSVSEVSE

Query:  LKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLSTLRGLMEGTRNELKELQW
        L  +  ELE +L++   ESE+LS L  EK + ++++ L VS+++ EI ++E  P I+   ++ L+T+R  ME  R E K  +W
Subjt:  LKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLSTLRGLMEGTRNELKELQW

A0A5A7VHW8 PMD domain-containing protein1.7e-1829.46Show/hide
Query:  LSSCHGNF--MTIEAYSPCRFSPPEVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRRE
        +SS H +   + + A++      PE S +  +NV+SNF +  AL MW+ I  KI             E+  +   + K   + L  L+E++  Y ++   
Subjt:  LSSCHGNF--MTIEAYSPCRFSPPEVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRRE

Query:  YLGMQSSLSAYLTPQIRDIQLEEKKLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQ
        +  +QSS SA L    +  QL EK   +K+ L++  ++  +  V+Q+R A       EL  +  ELE +L++   ESE+LS L  EK + +D++ L V++
Subjt:  YLGMQSSLSAYLTPQIRDIQLEEKKLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQ

Query:  IRKEIGSVECAPTISTSDVQTLSTLRGLMEGTRNELKELQW
        ++ E+ ++E  P I+   ++ L+T+R  ME  R E K  +W
Subjt:  IRKEIGSVECAPTISTSDVQTLSTLRGLMEGTRNELKELQW

A0A5D3BW91 Uncharacterized protein4.8e-1831.19Show/hide
Query:  PEVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEE
        PE S +  + V+SNF +  AL MW+ I  KI             E+  +   + K   + L  L+E++  Y ++   +  +QSS SA L    +  QL E
Subjt:  PEVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEE

Query:  KKLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLS
        K   +K+AL++  ++  +  V+Q+R A       EL  +  ELE +L++   ESE+LS L  EK + +D++ L V++++ E+ ++E  P I    ++ L+
Subjt:  KKLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLS

Query:  TLRGLMEGTRNELKELQW
        T+R  ME TR E K  +W
Subjt:  TLRGLMEGTRNELKELQW

A0A5D3C453 Uncharacterized protein3.5e-2437.9Show/hide
Query:  EVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEEK
        E+S+FC DN+IS+ RR  A+++ +S+  KI             EM KIF A+A + +NNL  L+E V GYFQ    +  M+SS+   L    +D QL E 
Subjt:  EVSYFCADNVISNFRRHAALSMWKSIHGKI-------------EMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEEK

Query:  KLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLST
        K  +K     E+R+ +E   +Q+RLA        L AK  +LEAKLK    ES KLS ++S+ E +L +++  +S+  +EI  ++CA  I  +D + L  
Subjt:  KLHLKKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLST

Query:  LRGLMEGTRNELKELQWNP
        LR  +E T  ELK L+W P
Subjt:  LRGLMEGTRNELKELQWNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGAGTCTTGTTCTTCAGTTCTGCAGCTGGATTTGATGAGGATCTGAGCTTCGATCTTCGGTTTTGCAGTGTTCGACCCCTGATTCAGGCAGAATTCAGGATGAT
CTATCGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGATCACTCGCCCTTCACATCTTGCCTCAGGCAGCGGAATTCAGGCTG
ATCACTCGAACATGGTGCATTTCACAGAGCTTTCAGATAATGGGAAGAAAATTCTGGTTGTTCTACTGGACAAAGATCAACCTATCAAAAGTGGGACCATTCTTCCAATA
GAGACTTCCATTACAGAGTCAAACCTTGAATTGGACAAATCTCATTTTCTTTCGGAATGGTTTGTAGAAAGGACTCAAGGTCAAAACTCATCCACTAAGGTTTGGATTCT
ACGATCTTCTTTACACGGAAAGAAGTCAAATGACAATCCAAAACCGACGTTGGGGCGTCGCATCATTGAAAATCAGCTAATTCATCAAGGCACCTCTATAATGTGGCATG
CCAGTCTTCCCTCCAGGAATGATAAAGCCGAAATTTTGGAAGACGTTAAGGGTTTATCATTTTCCTCTACTTCATTTTTTATAAGCCTTCGATCTTGCTATTTGTCTTCT
TGTCATGGAAACTTCATGACTATAGAAGCTTACAGCCCTTGTCGATTCAGCCCACCCGAAGTTTCTTATTTTTGTGCTGACAACGTAATCTCCAACTTCCGGCGACATGC
TGCTTTGTCCATGTGGAAAAGCATTCACGGGAAGATCGAGATGCTGAAAATATTTGGTGCAATGGCTAAAGCTAGCACAAATAATTTGGCGCCTCTGCAAGAGTTTGTCG
GCGGCTACTTCCAGAAGAGAAGAGAATACCTCGGAATGCAATCTTCACTCTCTGCTTACCTAACTCCACAGATTAGAGATATCCAATTGGAGGAAAAGAAGCTCCACTTA
AAAAAGGCCTTATCTGTTGAAAGTCGTGTTGCTGAGGAGAAGGATGTACTTCAGAAGCGACTTGCTTGCTCTGTCTCAGAGGTTTCAGAATTAAAGGCCAAGGTCGTAGA
ATTAGAGGCCAAATTGAAAACTGCAGAGGTTGAGTCAGAAAAGCTTTCCAATTTGGTTTCCGAGAAGGAAAAGGACCTAGATCGAGAAAGACTAGTGGTTTCACAAATAC
GCAAGGAGATTGGTAGCGTCGAGTGTGCCCCCACTATCAGCACTTCAGATGTTCAAACTCTATCGACACTCCGTGGACTTATGGAGGGTACTCGCAATGAGCTGAAGGAA
CTTCAGTGGAATCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAGAGTCTTGTTCTTCAGTTCTGCAGCTGGATTTGATGAGGATCTGAGCTTCGATCTTCGGTTTTGCAGTGTTCGACCCCTGATTCAGGCAGAATTCAGGATGAT
CTATCGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGATCACTCGCCCTTCACATCTTGCCTCAGGCAGCGGAATTCAGGCTG
ATCACTCGAACATGGTGCATTTCACAGAGCTTTCAGATAATGGGAAGAAAATTCTGGTTGTTCTACTGGACAAAGATCAACCTATCAAAAGTGGGACCATTCTTCCAATA
GAGACTTCCATTACAGAGTCAAACCTTGAATTGGACAAATCTCATTTTCTTTCGGAATGGTTTGTAGAAAGGACTCAAGGTCAAAACTCATCCACTAAGGTTTGGATTCT
ACGATCTTCTTTACACGGAAAGAAGTCAAATGACAATCCAAAACCGACGTTGGGGCGTCGCATCATTGAAAATCAGCTAATTCATCAAGGCACCTCTATAATGTGGCATG
CCAGTCTTCCCTCCAGGAATGATAAAGCCGAAATTTTGGAAGACGTTAAGGGTTTATCATTTTCCTCTACTTCATTTTTTATAAGCCTTCGATCTTGCTATTTGTCTTCT
TGTCATGGAAACTTCATGACTATAGAAGCTTACAGCCCTTGTCGATTCAGCCCACCCGAAGTTTCTTATTTTTGTGCTGACAACGTAATCTCCAACTTCCGGCGACATGC
TGCTTTGTCCATGTGGAAAAGCATTCACGGGAAGATCGAGATGCTGAAAATATTTGGTGCAATGGCTAAAGCTAGCACAAATAATTTGGCGCCTCTGCAAGAGTTTGTCG
GCGGCTACTTCCAGAAGAGAAGAGAATACCTCGGAATGCAATCTTCACTCTCTGCTTACCTAACTCCACAGATTAGAGATATCCAATTGGAGGAAAAGAAGCTCCACTTA
AAAAAGGCCTTATCTGTTGAAAGTCGTGTTGCTGAGGAGAAGGATGTACTTCAGAAGCGACTTGCTTGCTCTGTCTCAGAGGTTTCAGAATTAAAGGCCAAGGTCGTAGA
ATTAGAGGCCAAATTGAAAACTGCAGAGGTTGAGTCAGAAAAGCTTTCCAATTTGGTTTCCGAGAAGGAAAAGGACCTAGATCGAGAAAGACTAGTGGTTTCACAAATAC
GCAAGGAGATTGGTAGCGTCGAGTGTGCCCCCACTATCAGCACTTCAGATGTTCAAACTCTATCGACACTCCGTGGACTTATGGAGGGTACTCGCAATGAGCTGAAGGAA
CTTCAGTGGAATCCTTAA
Protein sequenceShow/hide protein sequence
MIRVLFFSSAAGFDEDLSFDLRFCSVRPLIQAEFRMIYRPSHLASGSDQPLIQAEFRMITRPSHLASGSGIQADHSNMVHFTELSDNGKKILVVLLDKDQPIKSGTILPI
ETSITESNLELDKSHFLSEWFVERTQGQNSSTKVWILRSSLHGKKSNDNPKPTLGRRIIENQLIHQGTSIMWHASLPSRNDKAEILEDVKGLSFSSTSFFISLRSCYLSS
CHGNFMTIEAYSPCRFSPPEVSYFCADNVISNFRRHAALSMWKSIHGKIEMLKIFGAMAKASTNNLAPLQEFVGGYFQKRREYLGMQSSLSAYLTPQIRDIQLEEKKLHL
KKALSVESRVAEEKDVLQKRLACSVSEVSELKAKVVELEAKLKTAEVESEKLSNLVSEKEKDLDRERLVVSQIRKEIGSVECAPTISTSDVQTLSTLRGLMEGTRNELKE
LQWNP