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Spg025737 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025737
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold13:30937839..30943604
RNA-Seq ExpressionSpg025737
SyntenySpg025737
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607234.1 hypothetical protein SDJN03_00576, partial [Cucurbita argyrosperma subsp. sororia]2.2e-0659.65Show/hide
Query:  QRLKTTRITKGS------LHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKT
        +R+ TT +   +      L LIPSETN+T EITRNPLE+ HGLDLE G  EDLLLKT
Subjt:  QRLKTTRITKGS------LHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKT
XP_022948541.1 uncharacterized protein LOC111452187 [Cucurbita moschata]2.9e-0679.49Show/hide
Query:  LHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKT
        L LIPSETN+T EITRNPLE+ HGLDLE G  EDLLLKT
Subjt:  LHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKT
XP_022997949.1 uncharacterized protein LOC111492746 [Cucurbita maxima]2.2e-0656.9Show/hide
Query:  QRLKTTRITKGSLH------LIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTT
        +R+ TT + + + +       IPSETN+T EITRNPLE+ HGLDLE G  EDLLLKTT
Subjt:  QRLKTTRITKGSLH------LIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTT
XP_023523159.1 uncharacterized protein LOC111787432 [Cucurbita pepo subsp. pepo]2.6e-0762.07Show/hide
Query:  QRLKTTRITKG------SLHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTT
        +R+ TT +         SL LIPSETN+T EITRNPLE+ HGLDLE G  EDLLLKTT
Subjt:  QRLKTTRITKG------SLHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTT
TrEMBL top hitse value%identityAlignment
A0A6J1G9H1 uncharacterized protein LOC1114521871.4e-0679.49Show/hide
Query:  LHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKT
        L LIPSETN+T EITRNPLE+ HGLDLE G  EDLLLKT
Subjt:  LHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKT
A0A6J1KBC0 uncharacterized protein LOC1114927461.1e-0656.9Show/hide
Query:  QRLKTTRITKGSLH------LIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTT
        +R+ TT + + + +       IPSETN+T EITRNPLE+ HGLDLE G  EDLLLKTT
Subjt:  QRLKTTRITKGSLH------LIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACGCAACGGGCTGTGGCGGCCGAGAGCAGCGTCTCCAATTACGACCAAAGATCAAAATATCATCGATATTGACGAAAACGTCGAGGCTTGTAACTATGAGTTCGG
GACCGGCCTAAGGGGGGTTTTGAGCCAATCTGAAGCAAACTCGGTGCGTACAGATTGCTGTCTGCTACATAAACGAGTTAGATGTTCAAGAGATCATACGAACTGCTGTC
ATGGAGGGTTCGGGTCGCATCTTGCTGTCCTTGTGGCTTGCCCAACTTTTCTAAGGTTCCTCCTTTGGGATCTTTATTGTTTTGAAGCCATAGAGGTTCTAAAGGCGTCA
GGGAGTGTAGAAATGATGGATCAGTGTGTTGATGAAGCTGAATACATCATGGTAATTTTGGACCACCATGGTGTACAAGGAGCTGACGAGGACAACCGGGCGGAGATAGG
ACCAGGAGACGACCCAGAGGAAGATCGGACCAACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCAGCCTTGGGCAGGTATTTATACCCCTCTTCGCCGCTG
AAGAAGGGGACCCGAACTCTCAATTCTCGACTCTCTTCTCTTACTCTCTTGCTCTCCTTCCGTTTTCTGACTTAAGCATCAGAGGCGGTGTGGTTAGCACCACACCGGTG
TGCAGGTTTTCTCTTTTGCAGGCCACGTCTTCCCCCGTTCTCAAACAAGTTCACTGTCGGTTATCACGTGGAGCGAAGACGGGTGATTTTGGGGTTCCTCTTTGTGGGTA
TAGTTGCAGAGCTTTACTATCTGCTATGGTGGAAGAAAAAAGAGAATCAGCATTACAGAGGTTGAAGACGACGAGAATAACAAAAGGGTCACTTCATTTGATTCCTTCTG
AAACCAACACCACTCACGAAATTACCAGAAACCCACTTGAGGACTGCCATGGATTGGACCTCGAGCTCGGCTGCAGTGAAGATTTGTTGTTGAAGACGACGAAGATGAGG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACGCAACGGGCTGTGGCGGCCGAGAGCAGCGTCTCCAATTACGACCAAAGATCAAAATATCATCGATATTGACGAAAACGTCGAGGCTTGTAACTATGAGTTCGG
GACCGGCCTAAGGGGGGTTTTGAGCCAATCTGAAGCAAACTCGGTGCGTACAGATTGCTGTCTGCTACATAAACGAGTTAGATGTTCAAGAGATCATACGAACTGCTGTC
ATGGAGGGTTCGGGTCGCATCTTGCTGTCCTTGTGGCTTGCCCAACTTTTCTAAGGTTCCTCCTTTGGGATCTTTATTGTTTTGAAGCCATAGAGGTTCTAAAGGCGTCA
GGGAGTGTAGAAATGATGGATCAGTGTGTTGATGAAGCTGAATACATCATGGTAATTTTGGACCACCATGGTGTACAAGGAGCTGACGAGGACAACCGGGCGGAGATAGG
ACCAGGAGACGACCCAGAGGAAGATCGGACCAACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCAGCCTTGGGCAGGTATTTATACCCCTCTTCGCCGCTG
AAGAAGGGGACCCGAACTCTCAATTCTCGACTCTCTTCTCTTACTCTCTTGCTCTCCTTCCGTTTTCTGACTTAAGCATCAGAGGCGGTGTGGTTAGCACCACACCGGTG
TGCAGGTTTTCTCTTTTGCAGGCCACGTCTTCCCCCGTTCTCAAACAAGTTCACTGTCGGTTATCACGTGGAGCGAAGACGGGTGATTTTGGGGTTCCTCTTTGTGGGTA
TAGTTGCAGAGCTTTACTATCTGCTATGGTGGAAGAAAAAAGAGAATCAGCATTACAGAGGTTGAAGACGACGAGAATAACAAAAGGGTCACTTCATTTGATTCCTTCTG
AAACCAACACCACTCACGAAATTACCAGAAACCCACTTGAGGACTGCCATGGATTGGACCTCGAGCTCGGCTGCAGTGAAGATTTGTTGTTGAAGACGACGAAGATGAGG
TAG
Protein sequenceShow/hide protein sequence
MKRNGLWRPRAASPITTKDQNIIDIDENVEACNYEFGTGLRGVLSQSEANSVRTDCCLLHKRVRCSRDHTNCCHGGFGSHLAVLVACPTFLRFLLWDLYCFEAIEVLKAS
GSVEMMDQCVDEAEYIMVILDHHGVQGADEDNRAEIGPGDDPEEDRTNGPGQRGPTRTVGLSLGQVFIPLFAAEEGDPNSQFSTLFSYSLALLPFSDLSIRGGVVSTTPV
CRFSLLQATSSPVLKQVHCRLSRGAKTGDFGVPLCGYSCRALLSAMVEEKRESALQRLKTTRITKGSLHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTTKMR