; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025744 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025744
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSmall COPII coat GTPase SAR1
Genome locationscaffold13:30427672..30431511
RNA-Seq ExpressionSpg025744
SyntenySpg025744
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR006687 - Small GTPase superfamily, SAR1-type
IPR006689 - Small GTPase superfamily, ARF/SAR type
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD33147.1 TPA_asm: hypothetical protein HUJ06_011998 [Nelumbo nucifera]2.2e-1360.49Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSFGKLAHDLVMRIQKIDGDNYPKVLGSKF
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK F S    A+ L+        D++P +L  +F
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSFGKLAHDLVMRIQKIDGDNYPKVLGSKF

KAF2590872.1 hypothetical protein F2Q70_00039840 [Brassica cretica]2.2e-1366.15Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSFGKLAHDLVMRI
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK F+      H  ++ +
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSFGKLAHDLVMRI

MBA0610161.1 hypothetical protein [Gossypium davidsonii]4.9e-1379.63Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSF
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK F+ F
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSF

MBA0679344.1 hypothetical protein [Gossypium aridum]2.2e-1379.63Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSF
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK F+ F
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSF

MBA0762592.1 hypothetical protein [Gossypium trilobum]4.9e-1379.63Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSF
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK F+ F
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSF

TrEMBL top hitse value%identityAlignment
A0A176VJ02 Uncharacterized protein4.0e-1362.16Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKN-FVSFGKLAHDLVMRIQKIDGDNY
        MLK+ERL QH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK+ + S      D V+   ++DG  Y
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKN-FVSFGKLAHDLVMRIQKIDGDNY

A0A7J8R8R3 Uncharacterized protein2.4e-1379.63Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSF
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK F+ F
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSF

A0A7J8WXG4 Uncharacterized protein1.1e-1379.63Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSF
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK F+ F
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSF

A0A7J9DPB3 Uncharacterized protein2.4e-1379.63Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSF
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK F+ F
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSF

A0A7J9L556 Uncharacterized protein2.4e-1379.63Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSF
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK F+ F
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSF

SwissProt top hitse value%identityAlignment
O04266 GTP-binding protein SAR1A1.2e-1483.67Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK

O04267 GTP-binding protein SAR1B1.2e-1483.67Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK

O04834 GTP-binding protein SAR1A1.2e-1483.67Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK

P52885 GTP-binding protein SAR11.2e-1483.67Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK

Q01474 GTP-binding protein SAR1B1.2e-1483.67Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK

Arabidopsis top hitse value%identityAlignment
AT1G09180.1 secretion-associated RAS super family 13.6e-1479.59Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK
        MLK+ERLVQH      TSEELSIGKI FKAFDLGGH+IARRVWKD YAK
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK

AT1G56330.1 secretion-associated RAS 1B8.5e-1683.67Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK

AT3G24840.1 Sec14p-like phosphatidylinositol transfer family protein1.2e-0636.59Show/hide
Query:  DYYAKNFVSFGKLAHDLVMRIQKIDGDNYPK----------------------------------VLGSKFQNKLLEVIDSS
        D +  +++SF KLA DLVMR+QKIDGDNYP+                                  VLG+K+++ LLE+ID S
Subjt:  DYYAKNFVSFGKLAHDLVMRIQKIDGDNYPK----------------------------------VLGSKFQNKLLEVIDSS

AT3G62560.1 Ras-related small GTP-binding family protein8.5e-1683.67Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK

AT4G02080.1 secretion-associated RAS super family 28.5e-1683.67Show/hide
Query:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK
        MLK+ERLVQH      TSEELSIGKIKFKAFDLGGH+IARRVWKDYYAK
Subjt:  MLKNERLVQHL-----TSEELSIGKIKFKAFDLGGHRIARRVWKDYYAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAGAACGAGAGATTAGTGCAACACCTGACCTCAGAGGAGTTGAGTATTGGGAAAATCAAATTCAAGGCTTTTGATCTTGGAGGCCACCGGATCGCTCGCAGAGT
CTGGAAAGATTATTATGCCAAGAACTTCGTGAGCTTTGGCAAGCTTGCTCATGATCTTGTTATGCGCATCCAAAAAATTGATGGGGACAATTATCCTAAGGTTTTGGGCA
GCAAATTTCAGAATAAGTTGTTGGAGGTCATAGACTCAAGTGTCATAGTTATCATGGAAGACGTTGGATTTATATGCTACATGGGTGGGAATATAGTCCACGGTCTGAAT
GGTATAGAGTACGATGTCGGGCCATCTGTTATGATCAATTTTGATCGGGATATTGCATTCGAAGATTTTATTCAAGGATTATGCAATGGCCTATCAATTGATAGAACTGG
AGGGTTGGAGGTCATATTTAGATACGGAACTATTGGATTTGAAGGGGCCACTTATTATGCTCCGGTATCATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAGAACGAGAGATTAGTGCAACACCTGACCTCAGAGGAGTTGAGTATTGGGAAAATCAAATTCAAGGCTTTTGATCTTGGAGGCCACCGGATCGCTCGCAGAGT
CTGGAAAGATTATTATGCCAAGAACTTCGTGAGCTTTGGCAAGCTTGCTCATGATCTTGTTATGCGCATCCAAAAAATTGATGGGGACAATTATCCTAAGGTTTTGGGCA
GCAAATTTCAGAATAAGTTGTTGGAGGTCATAGACTCAAGTGTCATAGTTATCATGGAAGACGTTGGATTTATATGCTACATGGGTGGGAATATAGTCCACGGTCTGAAT
GGTATAGAGTACGATGTCGGGCCATCTGTTATGATCAATTTTGATCGGGATATTGCATTCGAAGATTTTATTCAAGGATTATGCAATGGCCTATCAATTGATAGAACTGG
AGGGTTGGAGGTCATATTTAGATACGGAACTATTGGATTTGAAGGGGCCACTTATTATGCTCCGGTATCATTATGA
Protein sequenceShow/hide protein sequence
MLKNERLVQHLTSEELSIGKIKFKAFDLGGHRIARRVWKDYYAKNFVSFGKLAHDLVMRIQKIDGDNYPKVLGSKFQNKLLEVIDSSVIVIMEDVGFICYMGGNIVHGLN
GIEYDVGPSVMINFDRDIAFEDFIQGLCNGLSIDRTGGLEVIFRYGTIGFEGATYYAPVSL