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Spg025765 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025765
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationscaffold13:30018944..30019933
RNA-Seq ExpressionSpg025765
SyntenySpg025765
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]5.2e-1737.21Show/hide
Query:  QIHQAVEAWKIVRKMKNARHCEDTTTPYENWRAVRNGYEVVIPSESIASSDTFKMDQTHSK-RNLERLEERNLVLVRENEGLKDEVKRWIEQ--------
        +IH+AVEAWK V+KMK+ RHCE TT  Y+NWRA RNG  +   SES+  +   ++ + H K + L+RL E N V+  ENE L++EVK+W++Q        
Subjt:  QIHQAVEAWKIVRKMKNARHCEDTTTPYENWRAVRNGYEVVIPSESIASSDTFKMDQTHSK-RNLERLEERNLVLVRENEGLKDEVKRWIEQ--------

Query:  ---------------------LPMRKRNKKLQRKIELLQGEAEAQKAHIREWKREIERLNGVIEGFQGVIYD
                             + +RK+NK+L R I  L  E EA+K  I     EIE L   I+ ++  + +
Subjt:  ---------------------LPMRKRNKKLQRKIELLQGEAEAQKAHIREWKREIERLNGVIEGFQGVIYD

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]6.5e-2837.65Show/hide
Query:  QIHQAVEAWKIVRKMKNARHCEDTTTPYENWRAVRNGYEVVIPSESIASSDTFKMDQTHSK-RNLERLEERNLVLVRENEGLKDEVKRWIEQLPMRKRN-
        +IH+AVEAWK V+KMK+ RHCE TT  Y+NWRA RNG  +   SES+  +   ++ + H K + L+RL E N VL  ENE L++EVK+W++Q     R+ 
Subjt:  QIHQAVEAWKIVRKMKNARHCEDTTTPYENWRAVRNGYEVVIPSESIASSDTFKMDQTHSK-RNLERLEERNLVLVRENEGLKDEVKRWIEQLPMRKRN-

Query:  -----KKLQRK--IELLQGEAEAQKAHIREWK-----------------------REI--ERLNGVIEGFQGVI----------------YDDVRGHIER
             K+L+    IE+LQ   E  K+ + E +                       RE+  +    +IE +Q +                 YDD  G +ER
Subjt:  -----KKLQRK--IELLQGEAEAQKAHIREWK-----------------------REI--ERLNGVIEGFQGVI----------------YDDVRGHIER

Query:  GAEKLRSMAKMADRFVERAMTLGQGITPTQPGSEDLIRFLGVIGRDL
        GAEKLR MA++AD+F  +A TL QG+ PT+   ++L  FLG+IG+ L
Subjt:  GAEKLRSMAKMADRFVERAMTLGQGITPTQPGSEDLIRFLGVIGRDL

KAA0033848.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]7.8e-1328.02Show/hide
Query:  RNGYEVVIPSESIASSDTFKMDQTHSKRNLERLEERNLVLVRENEGLKDEVKRWIEQLPMRKR---------------------NKKLQRKIELLQGEAE
        R+G E  I  +S+  ++ F+++    ++NL+RL E N VL  ENEGL++EV    E   ++                        +++   IE+LQ   +
Subjt:  RNGYEVVIPSESIASSDTFKMDQTHSKRNLERLEERNLVLVRENEGLKDEVKRWIEQLPMRKR---------------------NKKLQRKIELLQGEAE

Query:  AQKAHIREWKREIERLNGVIEGFQGVI-----------------------------------------YDDVRGHIERGAEKLRSMAKMADRFVERAMTL
          K  I E + +   L   +   +  +                                         Y+DV+G IE+G +KLR MA+ AD+F  R + L
Subjt:  AQKAHIREWKREIERLNGVIEGFQGVI-----------------------------------------YDDVRGHIERGAEKLRSMAKMADRFVERAMTL

Query:  GQGITPTQPGSEDLIRFLGVIGRDLRHFECYH
         Q I P Q GS +L RFLG+IG  L  F CYH
Subjt:  GQGITPTQPGSEDLIRFLGVIGRDLRHFECYH

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.5e-1327.67Show/hide
Query:  NLVLVRENEGLKDEVKRWIEQ-----------------------------LPMRKRNKKLQRKIELLQGEAEAQKAHIREWKREIERLNGVIEGFQGVI-
        N VL  ENE L++EVK+W++Q                             + MRK+NK+L R I  L  E EA+K  I + K EIE+LNG+   FQ  + 
Subjt:  NLVLVRENEGLKDEVKRWIEQ-----------------------------LPMRKRNKKLQRKIELLQGEAEAQKAHIREWKREIERLNGVIEGFQGVI-

Query:  -----------------------------------------------------------------------------------------YDDVRGHIERG
                                                                                                 YDD  G +ERG
Subjt:  -----------------------------------------------------------------------------------------YDDVRGHIERG

Query:  AEKLRSMAKMADRFVERAMTLGQGITPTQPGSEDLIRFLGVIGRDLRHFECYH
        AEKLR MA++AD+F  +A TL QG+ PT+   ++L  FLG+IG+ L  F CYH
Subjt:  AEKLRSMAKMADRFVERAMTLGQGITPTQPGSEDLIRFLGVIGRDLRHFECYH

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]5.2e-1737.21Show/hide
Query:  QIHQAVEAWKIVRKMKNARHCEDTTTPYENWRAVRNGYEVVIPSESIASSDTFKMDQTHSK-RNLERLEERNLVLVRENEGLKDEVKRWIEQ--------
        +IH+AVEAWK V+KMK+ RHCE TT  Y+NWRA RNG  +   SES+  +   ++ + H K + L+RL E N V+  ENE L++EVK+W++Q        
Subjt:  QIHQAVEAWKIVRKMKNARHCEDTTTPYENWRAVRNGYEVVIPSESIASSDTFKMDQTHSK-RNLERLEERNLVLVRENEGLKDEVKRWIEQ--------

Query:  ---------------------LPMRKRNKKLQRKIELLQGEAEAQKAHIREWKREIERLNGVIEGFQGVIYD
                             + +RK+NK+L R I  L  E EA+K  I     EIE L   I+ ++  + +
Subjt:  ---------------------LPMRKRNKKLQRKIELLQGEAEAQKAHIREWKREIERLNGVIEGFQGVIYD

TrEMBL top hitse value%identityAlignment
A0A5A7SNY0 Glial fibrillary acidic protein-like2.5e-1737.21Show/hide
Query:  QIHQAVEAWKIVRKMKNARHCEDTTTPYENWRAVRNGYEVVIPSESIASSDTFKMDQTHSK-RNLERLEERNLVLVRENEGLKDEVKRWIEQ--------
        +IH+AVEAWK V+KMK+ RHCE TT  Y+NWRA RNG  +   SES+  +   ++ + H K + L+RL E N V+  ENE L++EVK+W++Q        
Subjt:  QIHQAVEAWKIVRKMKNARHCEDTTTPYENWRAVRNGYEVVIPSESIASSDTFKMDQTHSK-RNLERLEERNLVLVRENEGLKDEVKRWIEQ--------

Query:  ---------------------LPMRKRNKKLQRKIELLQGEAEAQKAHIREWKREIERLNGVIEGFQGVIYD
                             + +RK+NK+L R I  L  E EA+K  I     EIE L   I+ ++  + +
Subjt:  ---------------------LPMRKRNKKLQRKIELLQGEAEAQKAHIREWKREIERLNGVIEGFQGVIYD

A0A5A7SUT0 Reverse transcriptase3.2e-2837.65Show/hide
Query:  QIHQAVEAWKIVRKMKNARHCEDTTTPYENWRAVRNGYEVVIPSESIASSDTFKMDQTHSK-RNLERLEERNLVLVRENEGLKDEVKRWIEQLPMRKRN-
        +IH+AVEAWK V+KMK+ RHCE TT  Y+NWRA RNG  +   SES+  +   ++ + H K + L+RL E N VL  ENE L++EVK+W++Q     R+ 
Subjt:  QIHQAVEAWKIVRKMKNARHCEDTTTPYENWRAVRNGYEVVIPSESIASSDTFKMDQTHSK-RNLERLEERNLVLVRENEGLKDEVKRWIEQLPMRKRN-

Query:  -----KKLQRK--IELLQGEAEAQKAHIREWK-----------------------REI--ERLNGVIEGFQGVI----------------YDDVRGHIER
             K+L+    IE+LQ   E  K+ + E +                       RE+  +    +IE +Q +                 YDD  G +ER
Subjt:  -----KKLQRK--IELLQGEAEAQKAHIREWK-----------------------REI--ERLNGVIEGFQGVI----------------YDDVRGHIER

Query:  GAEKLRSMAKMADRFVERAMTLGQGITPTQPGSEDLIRFLGVIGRDL
        GAEKLR MA++AD+F  +A TL QG+ PT+   ++L  FLG+IG+ L
Subjt:  GAEKLRSMAKMADRFVERAMTLGQGITPTQPGSEDLIRFLGVIGRDL

A0A5A7VDD9 Glial fibrillary acidic protein-like1.7e-1327.67Show/hide
Query:  NLVLVRENEGLKDEVKRWIEQ-----------------------------LPMRKRNKKLQRKIELLQGEAEAQKAHIREWKREIERLNGVIEGFQGVI-
        N VL  ENE L++EVK+W++Q                             + MRK+NK+L R I  L  E EA+K  I + K EIE+LNG+   FQ  + 
Subjt:  NLVLVRENEGLKDEVKRWIEQ-----------------------------LPMRKRNKKLQRKIELLQGEAEAQKAHIREWKREIERLNGVIEGFQGVI-

Query:  -----------------------------------------------------------------------------------------YDDVRGHIERG
                                                                                                 YDD  G +ERG
Subjt:  -----------------------------------------------------------------------------------------YDDVRGHIERG

Query:  AEKLRSMAKMADRFVERAMTLGQGITPTQPGSEDLIRFLGVIGRDLRHFECYH
        AEKLR MA++AD+F  +A TL QG+ PT+   ++L  FLG+IG+ L  F CYH
Subjt:  AEKLRSMAKMADRFVERAMTLGQGITPTQPGSEDLIRFLGVIGRDLRHFECYH

A0A5D3BQ93 Glial fibrillary acidic protein-like3.8e-1328.02Show/hide
Query:  RNGYEVVIPSESIASSDTFKMDQTHSKRNLERLEERNLVLVRENEGLKDEVKRWIEQLPMRKR---------------------NKKLQRKIELLQGEAE
        R+G E  I  +S+  ++ F+++    ++NL+RL E N VL  ENEGL++EV    E   ++                        +++   IE+LQ   +
Subjt:  RNGYEVVIPSESIASSDTFKMDQTHSKRNLERLEERNLVLVRENEGLKDEVKRWIEQLPMRKR---------------------NKKLQRKIELLQGEAE

Query:  AQKAHIREWKREIERLNGVIEGFQGVI-----------------------------------------YDDVRGHIERGAEKLRSMAKMADRFVERAMTL
          K  I E + +   L   +   +  +                                         Y+DV+G IE+G +KLR MA+ AD+F  R + L
Subjt:  AQKAHIREWKREIERLNGVIEGFQGVI-----------------------------------------YDDVRGHIERGAEKLRSMAKMADRFVERAMTL

Query:  GQGITPTQPGSEDLIRFLGVIGRDLRHFECYH
         Q I P Q GS +L RFLG+IG  L  F CYH
Subjt:  GQGITPTQPGSEDLIRFLGVIGRDLRHFECYH

A0A5D3D0S2 Glial fibrillary acidic protein-like2.5e-1737.21Show/hide
Query:  QIHQAVEAWKIVRKMKNARHCEDTTTPYENWRAVRNGYEVVIPSESIASSDTFKMDQTHSK-RNLERLEERNLVLVRENEGLKDEVKRWIEQ--------
        +IH+AVEAWK V+KMK+ RHCE TT  Y+NWRA RNG  +   SES+  +   ++ + H K + L+RL E N V+  ENE L++EVK+W++Q        
Subjt:  QIHQAVEAWKIVRKMKNARHCEDTTTPYENWRAVRNGYEVVIPSESIASSDTFKMDQTHSK-RNLERLEERNLVLVRENEGLKDEVKRWIEQ--------

Query:  ---------------------LPMRKRNKKLQRKIELLQGEAEAQKAHIREWKREIERLNGVIEGFQGVIYD
                             + +RK+NK+L R I  L  E EA+K  I     EIE L   I+ ++  + +
Subjt:  ---------------------LPMRKRNKKLQRKIELLQGEAEAQKAHIREWKREIERLNGVIEGFQGVIYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATGCGACAAGTGCCCAGATTCATCAGGCAGTGGAGGCATGGAAAATAGTGAGAAAGATGAAAAACGCACGACACTGCGAGGACACAACGACGCCATATGAAAATTGGAG
AGCAGTTCGAAATGGATATGAGGTTGTCATTCCATCAGAATCAATAGCTTCAAGTGATACTTTCAAGATGGATCAGACTCACTCGAAGAGAAATTTGGAACGTTTAGAAG
AAAGAAATCTTGTCTTGGTAAGAGAAAATGAAGGATTAAAAGACGAGGTCAAACGATGGATTGAGCAGCTACCGATGAGGAAAAGAAATAAGAAGCTACAAAGGAAAATT
GAACTCTTGCAAGGTGAGGCAGAAGCTCAAAAGGCGCACATTCGAGAATGGAAGCGAGAAATAGAAAGACTTAATGGCGTTATCGAAGGTTTCCAAGGTGTCATTTATGA
TGACGTAAGAGGGCATATTGAACGAGGAGCTGAGAAGTTGAGATCGATGGCAAAGATGGCAGATCGATTTGTCGAACGAGCCATGACTCTTGGACAAGGTATCACACCCA
CACAACCTGGTAGTGAAGATTTAATCAGATTCCTAGGGGTGATAGGGCGAGATCTCAGGCATTTCGAGTGTTACCATTAG
mRNA sequenceShow/hide mRNA sequence
GATGCGACAAGTGCCCAGATTCATCAGGCAGTGGAGGCATGGAAAATAGTGAGAAAGATGAAAAACGCACGACACTGCGAGGACACAACGACGCCATATGAAAATTGGAG
AGCAGTTCGAAATGGATATGAGGTTGTCATTCCATCAGAATCAATAGCTTCAAGTGATACTTTCAAGATGGATCAGACTCACTCGAAGAGAAATTTGGAACGTTTAGAAG
AAAGAAATCTTGTCTTGGTAAGAGAAAATGAAGGATTAAAAGACGAGGTCAAACGATGGATTGAGCAGCTACCGATGAGGAAAAGAAATAAGAAGCTACAAAGGAAAATT
GAACTCTTGCAAGGTGAGGCAGAAGCTCAAAAGGCGCACATTCGAGAATGGAAGCGAGAAATAGAAAGACTTAATGGCGTTATCGAAGGTTTCCAAGGTGTCATTTATGA
TGACGTAAGAGGGCATATTGAACGAGGAGCTGAGAAGTTGAGATCGATGGCAAAGATGGCAGATCGATTTGTCGAACGAGCCATGACTCTTGGACAAGGTATCACACCCA
CACAACCTGGTAGTGAAGATTTAATCAGATTCCTAGGGGTGATAGGGCGAGATCTCAGGCATTTCGAGTGTTACCATTAG
Protein sequenceShow/hide protein sequence
DATSAQIHQAVEAWKIVRKMKNARHCEDTTTPYENWRAVRNGYEVVIPSESIASSDTFKMDQTHSKRNLERLEERNLVLVRENEGLKDEVKRWIEQLPMRKRNKKLQRKI
ELLQGEAEAQKAHIREWKREIERLNGVIEGFQGVIYDDVRGHIERGAEKLRSMAKMADRFVERAMTLGQGITPTQPGSEDLIRFLGVIGRDLRHFECYH