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Spg025854 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025854
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationscaffold7:835234..836584
RNA-Seq ExpressionSpg025854
SyntenySpg025854
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034227.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa]4.9e-1756.73Show/hide
Query:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPN--DNVTPEQHQKQYQYQNQKHEPAKKNPKHKNHGIAAYGR-LFVALKEQNSA--V
        MT+AQKG  LPKFG+WDEKNPAAAEGFTVIF+RARDNKKNGG     +NV P Q++ Q Q   ++ +  +K P+ K  G+ A+GR LFV +KE  +   V
Subjt:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPN--DNVTPEQHQKQYQYQNQKHEPAKKNPKHKNHGIAAYGR-LFVALKEQNSA--V

Query:  CGGF
         GGF
Subjt:  CGGF

KAG6573672.1 hypothetical protein SDJN03_27559, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1972.97Show/hide
Query:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQNQKHEPAKKNPKHK
        MT+A +GSSLPKFGEWDEK+PAAAEGFTVIFDRARD KKNGG PN NV P+++Q Q QY+++ HE AKKN K K
Subjt:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQNQKHEPAKKNPKHK

XP_004135294.1 protein NOI4 [Cucumis sativus]1.4e-1667.53Show/hide
Query:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGA---PNDNVTPEQHQKQYQYQNQKHEPAKKNPKHK
        M +AQKG  LPKFG+WDE+NPAAAEGFTVIF+RARDNKKNGGA   PN+ + P       Q Q+QK+EPAKKN KHK
Subjt:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGA---PNDNVTPEQHQKQYQYQNQKHEPAKKNPKHK

XP_022945363.1 RPM1-interacting protein 4-like [Cucurbita moschata]2.4e-1972.97Show/hide
Query:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQNQKHEPAKKNPKHK
        MT+A +GSSLPKFGEWDEK+PAAAEGFTVIFDRARD KKNGG PN NV P+++Q Q QY+++ HE AKKN K K
Subjt:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQNQKHEPAKKNPKHK

XP_038892913.1 protein NOI4-like isoform X1 [Benincasa hispida]4.9e-1772.6Show/hide
Query:  AQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPN--DNVTPEQHQKQYQYQNQKHEPAKKNPKHK
        A KG  LPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGG     +NV P+Q+Q   QYQN+KHE AKKN +H+
Subjt:  AQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPN--DNVTPEQHQKQYQYQNQKHEPAKKNPKHK

TrEMBL top hitse value%identityAlignment
A0A0A0KTF9 AvrRpt-cleavage domain-containing protein6.9e-1767.53Show/hide
Query:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGA---PNDNVTPEQHQKQYQYQNQKHEPAKKNPKHK
        M +AQKG  LPKFG+WDE+NPAAAEGFTVIF+RARDNKKNGGA   PN+ + P       Q Q+QK+EPAKKN KHK
Subjt:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGA---PNDNVTPEQHQKQYQYQNQKHEPAKKNPKHK

A0A1S3BEY0 RPM1-interacting protein 4-like7.2e-1465.28Show/hide
Query:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNG---GAPNDNVTPEQHQKQYQYQNQKHEPAKK
        MT+AQKG  LPKFG+WDEKNPAAAEGFTVIF+RARDNKKNG   G PN+ + P       Q + QK EPAK+
Subjt:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNG---GAPNDNVTPEQHQKQYQYQNQKHEPAKK

A0A5D3CUX8 RPM1-interacting protein 4-like2.4e-1756.73Show/hide
Query:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPN--DNVTPEQHQKQYQYQNQKHEPAKKNPKHKNHGIAAYGR-LFVALKEQNSA--V
        MT+AQKG  LPKFG+WDEKNPAAAEGFTVIF+RARDNKKNGG     +NV P Q++ Q Q   ++ +  +K P+ K  G+ A+GR LFV +KE  +   V
Subjt:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPN--DNVTPEQHQKQYQYQNQKHEPAKKNPKHKNHGIAAYGR-LFVALKEQNSA--V

Query:  CGGF
         GGF
Subjt:  CGGF

A0A6J1DEH9 RPM1-interacting protein 4-like2.6e-1154.05Show/hide
Query:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQNQKHEPAKKNPKHK
        M +   G +LPKFGEWD K+PA+AEGFT+IF++ARDNKKNGG         Q     + QNQKHE +KKN K++
Subjt:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQNQKHEPAKKNPKHK

A0A6J1G0L7 RPM1-interacting protein 4-like1.1e-1972.97Show/hide
Query:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQNQKHEPAKKNPKHK
        MT+A +GSSLPKFGEWDEK+PAAAEGFTVIFDRARD KKNGG PN NV P+++Q Q QY+++ HE AKKN K K
Subjt:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQNQKHEPAKKNPKHK

SwissProt top hitse value%identityAlignment
O22633 Protein NOI42.0e-0851.52Show/hide
Query:  AQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAP-NDNVTPEQHQKQYQYQNQKHEPAK
        + KG  LPKFGEWD  +PA+AEGFTVIF++ARD KK GG P +   + E H K       K +P K
Subjt:  AQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAP-NDNVTPEQHQKQYQYQNQKHEPAK

Q8GYN5 RPM1-interacting protein 48.5e-0435.09Show/hide
Query:  QKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQN
        +K + +PKFG+WDE NP++A+G+T IF++ R+ + +G   + +     HQ      N
Subjt:  QKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQN

Arabidopsis top hitse value%identityAlignment
AT3G48450.1 RPM1-interacting protein 4 (RIN4) family protein1.2e-0841.25Show/hide
Query:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKN----GGAPNDNVTPEQHQKQYQYQNQKHEPAKKNPKHKNH
        M T  +   LPKFGEWD  NP +AEGFTVIF++ARD+KK        P   V+P ++++          P   N  H NH
Subjt:  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKN----GGAPNDNVTPEQHQKQYQYQNQKHEPAKKNPKHKNH

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein2.8e-1052.24Show/hide
Query:  AQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAP-NDNVTPEQHQKQYQYQNQKHEPAKK
        + KG  LPKFGEWD  +PA+AEGFTVIF++ARD KK GG P +   + E H K       K +P KK
Subjt:  AQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAP-NDNVTPEQHQKQYQYQNQKHEPAKK

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein3.6e-1053.85Show/hide
Query:  KGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAP-NDNVTPEQHQKQYQYQNQKHEPAKK
        KG  LPKFGEWD  +PA+AEGFTVIF++ARD KK GG P +   + E H K       K +P KK
Subjt:  KGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAP-NDNVTPEQHQKQYQYQNQKHEPAKK

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein1.4e-0953.12Show/hide
Query:  KGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAP-NDNVTPEQHQKQYQYQNQKHEPAK
        KG  LPKFGEWD  +PA+AEGFTVIF++ARD KK GG P +   + E H K       K +P K
Subjt:  KGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAP-NDNVTPEQHQKQYQYQNQKHEPAK

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein1.9e-1151.35Show/hide
Query:  KGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKK----NGGAPNDNVTPEQHQKQYQYQNQKHEPAKKNPKHKN
        KG  LPKFGEWD  NPA+AEGFTVIF +A D KK    +G  PN  V+P+++Q   Q  N     + +NPK KN
Subjt:  KGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKK----NGGAPNDNVTPEQHQKQYQYQNQKHEPAKKNPKHKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACAGCTCAGAAGGGTTCATCTTTGCCCAAATTTGGCGAGTGGGATGAAAAAAATCCTGCTGCAGCTGAAGGGTTCACAGTGATTTTCGACAGGGCACGAGATAA
TAAGAAGAATGGAGGGGCTCCAAATGATAATGTGACACCAGAGCAACACCAAAAACAATACCAATACCAAAATCAAAAACATGAACCTGCTAAGAAGAATCCCAAGCACA
AAAATCATGGCATTGCTGCTTATGGTAGACTTTTTGTGGCTCTGAAAGAACAAAATTCAGCTGTTTGTGGTGGCTTTTTTAGTGCAGAGATTGATGCAATTGGCTGTGTA
TACAGTTTGCCATTTGGTGTCTTATTTTTGGTAAAAATTTGTTGGGGTTTTCTTTCTGTTCATTACATTAGGCTTCTTGGGTTACCTCCTCCTGTACTTAATACATTGTT
TATAGAAAGAAAAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACAGCTCAGAAGGGTTCATCTTTGCCCAAATTTGGCGAGTGGGATGAAAAAAATCCTGCTGCAGCTGAAGGGTTCACAGTGATTTTCGACAGGGCACGAGATAA
TAAGAAGAATGGAGGGGCTCCAAATGATAATGTGACACCAGAGCAACACCAAAAACAATACCAATACCAAAATCAAAAACATGAACCTGCTAAGAAGAATCCCAAGCACA
AAAATCATGGCATTGCTGCTTATGGTAGACTTTTTGTGGCTCTGAAAGAACAAAATTCAGCTGTTTGTGGTGGCTTTTTTAGTGCAGAGATTGATGCAATTGGCTGTGTA
TACAGTTTGCCATTTGGTGTCTTATTTTTGGTAAAAATTTGTTGGGGTTTTCTTTCTGTTCATTACATTAGGCTTCTTGGGTTACCTCCTCCTGTACTTAATACATTGTT
TATAGAAAGAAAAGGTTGA
Protein sequenceShow/hide protein sequence
MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQNQKHEPAKKNPKHKNHGIAAYGRLFVALKEQNSAVCGGFFSAEIDAIGCV
YSLPFGVLFLVKICWGFLSVHYIRLLGLPPPVLNTLFIERKG