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Spg025910 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025910
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFanconi-associated nuclease
Genome locationscaffold7:531531..543691
RNA-Seq ExpressionSpg025910
SyntenySpg025910
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4378427.1 hypothetical protein F8388_021621 [Cannabis sativa]6.5e-0534.78Show/hide
Query:  RRRGQKSKGKALVEAENESPRKFINMAAAARF-EEIKNRDLMLEKGF---EANLDSLPHMLAVTIANQNWQKLCHKPEPAVPNIVKEFYANF
        ++ G +++ K+ +E     PRKFI+ AA A++ + +++++  +E+G    + N  S+P  L   I  + W+ LC  P  AV  +VKEFYANF
Subjt:  RRRGQKSKGKALVEAENESPRKFINMAAAARF-EEIKNRDLMLEKGF---EANLDSLPHMLAVTIANQNWQKLCHKPEPAVPNIVKEFYANF
TrEMBL top hitse value%identityAlignment
A0A7J6G6G2 Fanconi-associated nuclease3.2e-0534.78Show/hide
Query:  RRRGQKSKGKALVEAENESPRKFINMAAAARF-EEIKNRDLMLEKGF---EANLDSLPHMLAVTIANQNWQKLCHKPEPAVPNIVKEFYANF
        ++ G +++ K+ +E     PRKFI+ AA A++ + +++++  +E+G    + N  S+P  L   I  + W+ LC  P  AV  +VKEFYANF
Subjt:  RRRGQKSKGKALVEAENESPRKFINMAAAARF-EEIKNRDLMLEKGF---EANLDSLPHMLAVTIANQNWQKLCHKPEPAVPNIVKEFYANF
A0A803QN52 Uncharacterized protein7.1e-0540.79Show/hide
Query:  MAAAARFEEIKNRDLMLEKGFEANLD---SLPHMLAVTIANQNWQKLCHKPEPAVPNIVKEFYANFQDNGVWMTKV
        MA      ++ NRD  +E+G  A+ D    LP  ++  I  ++W+ L  KPEPAV  +VKEFYANF  +  W T+V
Subjt:  MAAAARFEEIKNRDLMLEKGFEANLD---SLPHMLAVTIANQNWQKLCHKPEPAVPNIVKEFYANFQDNGVWMTKV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGGAAGCTTCAAACGTCAAGAGAACCTATGATCGACGCTTGCAGTCGGTTGAAACTTCGGTAGAAGACATCAAGAAGAGTGTGACTGACATTCAACAGTCCAT
TAGGCAACATAGACAACAAATGAGTACGCTGGCAGCAAATCAACAAAACTTGGGAGACAACAGAATAGCAATAAACCCAAGAAATCCCCAAGAAAACCAAGACAGATTGG
TGGCGGGAGCAAGAAACATCCAAGAAAACAGAAATGAAGTTGTTGTCCATCCAAAAAGACTAGCCAATGCTGAATTTGAAAGAATCCCTGAAGCATTCATGCCCGAAAGT
CAGCTCCCCATGATGAAAACCAAGGCCACTCCTGGCAAGCAAAATGTGCCTGCATCACCACCTCATCCGGAATGTTCCTCTAACCCCTCCCTTTCTAAACTTAAAGTAGA
GCTCGAGCATTTAAGGGAGCAAAGTAGAGCCTATTGGGCCTATGCAAGAGAGAGAGACAAAGCCATCCGTGGAATTAAGGCTGATGGCAAGCTCTATTTTCATTCGGAAC
CCAACTTCACCACTGTATCTCATTATGGCCACCATGGAGTGGTAGTTGGTGTAAGACCGCAACGGACAAACCCTTCGGATAAGGGAAAACTCCAAAGATTGCTTCGAAGT
TGTAAGGAGTTCACACTACTAATGGAGGGAAAACTTGGGAATATGAAAACTGGAGAAAGGAGCTCCAGCTTGCTGTATTTTTGTAAAGTAATGGGGCCAAGATCAATTGC
TAGAAAGATTTTCAAGGCGAGAGCAACCGGGGAAGACGGTTCATCCACCCAAAACAGAGGCAAACAGCCCATGCTCGATGATTCTAGCTTGATGCAGCCCGCTTCTCCTC
CACGAAGGAGAGGCCAAAAGAGTAAAGGGAAAGCCCTCGTTGAGGCCGAAAATGAAAGCCCAAGGAAATTTATCAACATGGCAGCAGCCGCAAGGTTCGAGGAGATTAAA
AATAGAGACTTGATGCTTGAAAAAGGATTCGAGGCAAATTTAGACAGCTTACCACACATGTTAGCTGTGACAATTGCCAACCAAAATTGGCAAAAACTCTGTCATAAGCC
CGAGCCAGCCGTGCCCAATATTGTCAAGGAGTTCTACGCCAACTTCCAAGATAATGGAGTGTGGATGACCAAGGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCGGAAGCTTCAAACGTCAAGAGAACCTATGATCGACGCTTGCAGTCGGTTGAAACTTCGGTAGAAGACATCAAGAAGAGTGTGACTGACATTCAACAGTCCAT
TAGGCAACATAGACAACAAATGAGTACGCTGGCAGCAAATCAACAAAACTTGGGAGACAACAGAATAGCAATAAACCCAAGAAATCCCCAAGAAAACCAAGACAGATTGG
TGGCGGGAGCAAGAAACATCCAAGAAAACAGAAATGAAGTTGTTGTCCATCCAAAAAGACTAGCCAATGCTGAATTTGAAAGAATCCCTGAAGCATTCATGCCCGAAAGT
CAGCTCCCCATGATGAAAACCAAGGCCACTCCTGGCAAGCAAAATGTGCCTGCATCACCACCTCATCCGGAATGTTCCTCTAACCCCTCCCTTTCTAAACTTAAAGTAGA
GCTCGAGCATTTAAGGGAGCAAAGTAGAGCCTATTGGGCCTATGCAAGAGAGAGAGACAAAGCCATCCGTGGAATTAAGGCTGATGGCAAGCTCTATTTTCATTCGGAAC
CCAACTTCACCACTGTATCTCATTATGGCCACCATGGAGTGGTAGTTGGTGTAAGACCGCAACGGACAAACCCTTCGGATAAGGGAAAACTCCAAAGATTGCTTCGAAGT
TGTAAGGAGTTCACACTACTAATGGAGGGAAAACTTGGGAATATGAAAACTGGAGAAAGGAGCTCCAGCTTGCTGTATTTTTGTAAAGTAATGGGGCCAAGATCAATTGC
TAGAAAGATTTTCAAGGCGAGAGCAACCGGGGAAGACGGTTCATCCACCCAAAACAGAGGCAAACAGCCCATGCTCGATGATTCTAGCTTGATGCAGCCCGCTTCTCCTC
CACGAAGGAGAGGCCAAAAGAGTAAAGGGAAAGCCCTCGTTGAGGCCGAAAATGAAAGCCCAAGGAAATTTATCAACATGGCAGCAGCCGCAAGGTTCGAGGAGATTAAA
AATAGAGACTTGATGCTTGAAAAAGGATTCGAGGCAAATTTAGACAGCTTACCACACATGTTAGCTGTGACAATTGCCAACCAAAATTGGCAAAAACTCTGTCATAAGCC
CGAGCCAGCCGTGCCCAATATTGTCAAGGAGTTCTACGCCAACTTCCAAGATAATGGAGTGTGGATGACCAAGGTCTGA
Protein sequenceShow/hide protein sequence
MEAEASNVKRTYDRRLQSVETSVEDIKKSVTDIQQSIRQHRQQMSTLAANQQNLGDNRIAINPRNPQENQDRLVAGARNIQENRNEVVVHPKRLANAEFERIPEAFMPES
QLPMMKTKATPGKQNVPASPPHPECSSNPSLSKLKVELEHLREQSRAYWAYARERDKAIRGIKADGKLYFHSEPNFTTVSHYGHHGVVVGVRPQRTNPSDKGKLQRLLRS
CKEFTLLMEGKLGNMKTGERSSSLLYFCKVMGPRSIARKIFKARATGEDGSSTQNRGKQPMLDDSSLMQPASPPRRRGQKSKGKALVEAENESPRKFINMAAAARFEEIK
NRDLMLEKGFEANLDSLPHMLAVTIANQNWQKLCHKPEPAVPNIVKEFYANFQDNGVWMTKV