| GenBank top hits | e value | %identity | Alignment |
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| XP_004135336.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis sativus] | 8.4e-202 | 96.22 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PSEGENALATVGPRPMEWSTVPYN PQGPGPN KQRTSSLESPIMLL+GHQSAIYTLKFNP GNV+ASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWT DGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPI+ SC SDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
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| XP_008446018.1 PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo] | 2.0e-203 | 97.09 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PSEGENALATVGPRPMEWSTVPYN PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTLKFNP GNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWT DGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPI+ SCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
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| XP_022945717.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita moschata] | 9.6e-206 | 98.26 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PS GENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPI+GSCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
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| XP_022966914.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita maxima] | 3.6e-205 | 97.97 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PS GENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLL GHQSAIYTLKFNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPI+GSCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
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| XP_023542336.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita pepo subsp. pepo] | 2.8e-205 | 97.97 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PS GENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVM+TLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPI+GSCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KTB1 WD_REPEATS_REGION domain-containing protein | 4.1e-202 | 96.22 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PSEGENALATVGPRPMEWSTVPYN PQGPGPN KQRTSSLESPIMLL+GHQSAIYTLKFNP GNV+ASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWT DGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPI+ SC SDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
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| A0A1S3BDK5 U5 small nuclear ribonucleoprotein 40 kDa protein | 9.7e-204 | 97.09 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PSEGENALATVGPRPMEWSTVPYN PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTLKFNP GNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWT DGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPI+ SCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
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| A0A5A7SYI1 U5 small nuclear ribonucleoprotein 40 kDa protein | 9.7e-204 | 97.09 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PSEGENALATVGPRPMEWSTVPYN PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTLKFNP GNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWT DGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPI+ SCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
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| A0A6J1G1Q0 U5 small nuclear ribonucleoprotein 40 kDa protein | 4.6e-206 | 98.26 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PS GENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPI+GSCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
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| A0A6J1HV60 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.8e-205 | 97.97 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PS GENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLL GHQSAIYTLKFNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPI+GSCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
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| SwissProt top hits | e value | %identity | Alignment |
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| Q2HJH6 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.2e-123 | 61.17 | Show/hide |
Query: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKM
G R SSL++PIMLL+GH+ +Y KF+P G+ +AS D+ I LWNV+GDC N+ L+GH AV++LH+ TDGS + SAS DKT+ WD ETG+++K++
Subjt: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSS
SYLL+N MD + +WD+RP+AP+ RCV+IF+G+ HNFEKNLL+CSWSPDGSK+ AGS+DR VYVWDTTSRRIL+KLPGH GS+NE FHP EPII S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Q55AR8 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.9e-111 | 57.42 | Show/hide |
Query: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKM
G +RTS LE PIM L GH+ IY+ KFN G +ASG DKEIFLWNV+G+C N+ VL+GHK +L+LHW+TD ++I +A DK++ WD G+ IK++
Subjt: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGE-VMMTLQGHQDMITGMQLSPD
EHS VNSCCP RRGPPL+ SGSDD +A+++D R +G+ F KY +T+V FSDASD++ TGGIDN ++VWD+R E + TL HQD IT +S D
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGE-VMMTLQGHQDMITGMQLSPD
Query: GSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCS
G+YLL+N MD IWD+RPYAP NR +K F G Q+NFEKNL+K SWS DG ++ GSSDR VY+WDT ++++ + LPGH+G+VNE FHP+EPII SCS
Subjt: GSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCS
Query: SDKQIYLGEI
SDK IYLGEI
Subjt: SDKQIYLGEI
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| Q5RF51 U5 small nuclear ribonucleoprotein 40 kDa protein | 5.2e-122 | 60.84 | Show/hide |
Query: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKM
G R SSL++PIMLL+GH+ +Y KF+P G+ +AS D+ I LWNV+GDC N+ L+G+ AV++LH+ TDGS + SAS DKT+ WD ETG+++K++
Subjt: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSS
SYLL+N MD + +WD+RP+AP+ RCVKIF+G+ HNFEKNLL+CSWSPDGSK+ AGS+DR V VWDTTSRRIL+KLPGH GS+NE FHP EPII S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Q6PE01 U5 small nuclear ribonucleoprotein 40 kDa protein | 9.6e-124 | 60.84 | Show/hide |
Query: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKM
G R SSL++PIMLL+GH+ +Y KF+P G+ +AS D+ I LWNV+GDC N+ L+GH AV++LH+ TDGS + SAS DKT+ WD ETG+++K++
Subjt: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ A+QTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSS
SYLL+N MD + +WD+RP+AP+ RCVKIF+G+ HNFEKNLL+CSWSPDGSK+ AGS+DR VYVWDTTSRR+L+KLPGH GS+NE FHP EPII S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Q96DI7 U5 small nuclear ribonucleoprotein 40 kDa protein | 5.6e-124 | 61.49 | Show/hide |
Query: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKM
G R SSL++PIMLL+GH+ +Y KF+P G+ +AS D+ I LWNV+GDC N+ L+GH AV++LH+ TDGS + SAS DKT+ WD ETG+++K++
Subjt: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSS
SYLL+N MD + +WD+RP+AP+ RCVKIF+G+ HNFEKNLL+CSWSPDGSK+ AGS+DR VYVWDTTSRRIL+KLPGH GS+NE FHP EPII S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G10580.1 Transducin/WD40 repeat-like superfamily protein | 9.4e-26 | 24.05 | Show/hide |
Query: TGHQSAIYTLKFNP-AGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHS-SFVNSCCPT
+GH + ++F P G+++ S D ++ +W+V+ K GH AV D+ ++ DGS+ ++A DK ++ WD ETG+ I + +V P
Subjt: TGHQSAIYTLKFNP-AGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHS-SFVNSCCPT
Query: RRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGMDCK
++++G D WD+ Q + + ++F D + + T D ++VW+ V+ + + H + + + P+G++L +D +
Subjt: RRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGMDCK
Query: LCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPI-IGSCSSD
+ I+ R N+ K F G H + ++SPDG V +G + + WD S ++ L H G +HP E + +C D
Subjt: LCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPI-IGSCSSD
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| AT2G43770.1 Transducin/WD40 repeat-like superfamily protein | 1.0e-189 | 88.43 | Show/hide |
Query: ENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTT
EN A GPRPMEWSTVP++A QGPGPNGK RTSSLE+PIMLL+GH SA+YT+KFNPAG +IASGSHD+EIFLW VHGDCKNFMVL+GHKNA+LDLHWT+
Subjt: ENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTT
Query: DGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKV
DGSQIVSASPDKT+RAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLI+SGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDA+DKIFTGG+DNDVKV
Subjt: DGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKV
Query: WDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRI
WDLRKGE MTL+GHQD ITGM LSPDGSYLLTNGMD KLC+WDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDG+KVTAGSSDRMV++WDTTSRR
Subjt: WDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRI
Query: LFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
++KLPGHTGSVNECVFHP+EPIIGSCSSDK IYLGEI
Subjt: LFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
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| AT3G49660.1 Transducin/WD40 repeat-like superfamily protein | 5.2e-40 | 30.74 | Show/hide |
Query: LTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVH----GDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSC
LT H A+ ++KF+ G ++AS S DK I + ++ + GH+N + D+ +++D IVSAS DKTL+ WDVETG IK + H+++ C
Subjt: LTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVH----GDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSC
Query: CPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGM
+IVSGS D T ++WD+ ++ P +TAV F+ I + D ++WD G + TL ++ ++ SP+G ++L +
Subjt: CPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQI
D L +W++ + +K + GH N + + +G ++ +GS D V++W+ S+++L KL GHT +V HP+E +I S S DK +
Subjt: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQI
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| AT5G52820.1 WD-40 repeat family protein / notchless protein, putative | 1.3e-27 | 28.57 | Show/hide |
Query: LTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGK-QIKKMAEHSSFVN--SCC
+ GH A+ + F+P G +ASGS D + LW+++ + F +GHKN VL + W+ DG +VS S + W+ + G+ + + H ++ S
Subjt: LTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGK-QIKKMAEHSSFVN--SCC
Query: PTRRGPPL--IVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
P P V+ S DG A++WD+ ++ I +T V + I+TG D +K+W+ +G+++ L+GH I + LS + Y+L G
Subjt: PTRRGPPL--IVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDM--RPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWD-TTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIY
+D R Y P K E ++N K SP+ ++ +GS D +++W+ + S++ +L GH VN F P I S S DK +
Subjt: DCKLCIWDM--RPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWD-TTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIY
Query: L
L
Subjt: L
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| AT5G64730.1 Transducin/WD40 repeat-like superfamily protein | 5.3e-29 | 27.36 | Show/hide |
Query: LLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPT
+L GH+ A+ +FN GN + D+ I LWN H + H V D+H T+D ++ S D+ + WDV TG+ I+K H VN+
Subjt: LLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPT
Query: RRGPPLIVSGSDDGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
++VS D + ++WD R I TF D T +S +I G +D V+ +D+R G M G + + +S DG+ +L +
Subjt: RRGPPLIVSGSDDGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQI
D L + D +++++GH K C + + V GS D +V+ WD ++L K H V +HP E + + S D I
Subjt: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQI
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