; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025957 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025957
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein CRABS CLAW
Genome locationscaffold7:2922886..2923915
RNA-Seq ExpressionSpg025957
SyntenySpg025957
Gene Ontology termsGO:0048440 - carpel development (biological process)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR006780 - YABBY protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574037.1 Protein DROOPING LEAF, partial [Cucurbita argyrosperma subsp. sororia]7.1e-4468.9Show/hide
Query:  SRGADGSAKVQRRYDAEYDHLLHFLPAFFKNSMSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGH
        S G DGSAKVQ R      HL           MSSE+KSSMDL QPS+HLCYVKCNFCNTVLAV +                      RLLDTVTVKCGH
Subjt:  SRGADGSAKVQRRYDAEYDHLLHFLPAFFKNSMSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGH

Query:  CSNLSFLSTRPPLQGQCIDHPLSFQQSQVGFSNDIRKGASTSSSSTSSSMANDSPSANFVVKRR
        CSNLSFLSTRPPLQGQCIDHPLSF QSQVGFSNDIRKGASTSSSS SSSMAN+SPSANFVVK+R
Subjt:  CSNLSFLSTRPPLQGQCIDHPLSFQQSQVGFSNDIRKGASTSSSSTSSSMANDSPSANFVVKRR

KAG7013095.1 Protein CRABS CLAW, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-4367.3Show/hide
Query:  ADGSAKVQRRYDAEYDHLLHFLPAFFKNSMSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSN
        A GSAK   + +A+         A  ++ MSSE+KSSMDL QPS+HLCYVKCNFCNTVLAV +                      RLLDTVTVKCGHCSN
Subjt:  ADGSAKVQRRYDAEYDHLLHFLPAFFKNSMSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSN

Query:  LSFLSTRPPLQGQCIDHPLSFQQSQVGFSNDIRKGASTSSSSTSSSMANDSPSANFVVK
        LSFLSTRPPLQGQCIDHPLSF QSQVGFSNDIRKGASTSSSS+SSSMAN+SPSANFVVK
Subjt:  LSFLSTRPPLQGQCIDHPLSFQQSQVGFSNDIRKGASTSSSSTSSSMANDSPSANFVVK

XP_022944998.1 protein CRABS CLAW [Cucurbita moschata]2.3e-4276.92Show/hide
Query:  MSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVGFS
        MSSE+KSSMDL QPS+HLCYVKCNFCNTVLAV +                      RLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSF QSQVGFS
Subjt:  MSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVGFS

Query:  NDIRKGASTSSSSTSSSMANDSPSANFVVK
        NDIRKGASTSSSS+SSSMAN+SPSANFVVK
Subjt:  NDIRKGASTSSSSTSSSMANDSPSANFVVK

XP_023542830.1 protein CRABS CLAW [Cucurbita pepo subsp. pepo]1.1e-4176.15Show/hide
Query:  MSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVGFS
        MSSE+KSSMDL QPS+HLCYVKCNFCNTVLAV +                      RLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSF QSQVGFS
Subjt:  MSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVGFS

Query:  NDIRKGASTSSSSTSSSMANDSPSANFVVK
         DIRKGASTSSSS+SSSMAN+SPSANFVVK
Subjt:  NDIRKGASTSSSSTSSSMANDSPSANFVVK

XP_038893343.1 protein CRABS CLAW isoform X1 [Benincasa hispida]2.8e-4071.97Show/hide
Query:  NSMSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVG
        ++ +S++KSSMDL QPSEHLCYVKCNFCNTVLAV +                      RLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSF QSQVG
Subjt:  NSMSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVG

Query:  FSNDIRKGASTSSSSTSSSMANDSPSANFVVK
        FSNDIRKGASTSS+STSSS+ N+SPS NFVVK
Subjt:  FSNDIRKGASTSSSSTSSSMANDSPSANFVVK

TrEMBL top hitse value%identityAlignment
A0A0A0KQW3 Uncharacterized protein1.2e-3368.18Show/hide
Query:  SSEEKSSM-DLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVGFS
        +SE+KSSM DL QPSEH CYVKCNFCNTVLAV +   +                    LDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPL+F QSQVGFS
Subjt:  SSEEKSSM-DLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVGFS

Query:  ND--IRKGASTSSSSTSSSMANDSPSANFVVK
        N+  IRKGASTSS+ST+SS+ NDSP  NFVVK
Subjt:  ND--IRKGASTSSSSTSSSMANDSPSANFVVK

A0A1S3BFS7 protein CRABS CLAW1.2e-3368.18Show/hide
Query:  SSEEKSSM-DLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVGFS
        +SE+KSSM DL QPSEH CYVKCNFCNTVLAV +   +                    LDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPL+F QSQVGFS
Subjt:  SSEEKSSM-DLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVGFS

Query:  ND--IRKGASTSSSSTSSSMANDSPSANFVVK
        N+  IRKGASTSS+ST+SS+ NDSP  NFVVK
Subjt:  ND--IRKGASTSSSSTSSSMANDSPSANFVVK

A0A6J1D6X3 protein CRABS CLAW4.4e-3972.52Show/hide
Query:  MSSEE-KSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVGF
        MSSE+ K+SMDL QPSEHLCYV+CNFCNTVLAV +                      RLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPL F Q+QVGF
Subjt:  MSSEE-KSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVGF

Query:  SNDIRKGASTSSSSTSSSMANDSPSANFVVK
        SNDIRKGASTSS+STSSSMAN+SPS +FVVK
Subjt:  SNDIRKGASTSSSSTSSSMANDSPSANFVVK

A0A6J1FZK6 protein CRABS CLAW1.1e-4276.92Show/hide
Query:  MSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVGFS
        MSSE+KSSMDL QPS+HLCYVKCNFCNTVLAV +                      RLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSF QSQVGFS
Subjt:  MSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVGFS

Query:  NDIRKGASTSSSSTSSSMANDSPSANFVVK
        NDIRKGASTSSSS+SSSMAN+SPSANFVVK
Subjt:  NDIRKGASTSSSSTSSSMANDSPSANFVVK

A0A6J1HVT7 protein CRABS CLAW1.8e-4074.44Show/hide
Query:  MSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVGFS
        MSSE+K+SMDL QPSEHLCYVKCNFCNTVLAV +                      RLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSF QSQVGFS
Subjt:  MSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQVGFS

Query:  NDIRKGAST---SSSSTSSSMANDSPSANFVVK
        N+IRKGAST   SSSS+SSSMAN+SPSANFVVK
Subjt:  NDIRKGAST---SSSSTSSSMANDSPSANFVVK

SwissProt top hitse value%identityAlignment
O22152 Axial regulator YABBY 18.0e-0633.33Show/hide
Query:  NSMSSEEKS--SMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRP---PLQGQCIDHPLSFQ
        +SMSS   +  S D   PS+HLCYV+CNFC T+LAV +                    Y  L  TVTV+CG C+NL  ++ R    P   Q     L  Q
Subjt:  NSMSSEEKS--SMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRP---PLQGQCIDHPLSFQ

Query:  QSQVGFSN--DIRKGASTSSSSTSSSMANDSPSAN
             + N  DI +    + S+ +  M N  P+ N
Subjt:  QSQVGFSN--DIRKGASTSSSSTSSSMANDSPSAN

Q10FZ7 Protein YABBY 23.0e-0528.7Show/hide
Query:  SMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTR---------PPLQGQCIDHPLSFQQSQVG
        S  +    EH+CYV CNFCNT+ AV++  ++                   +L+ VTV+CGHC++L  ++ R           LQ     H +SF+++   
Subjt:  SMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTR---------PPLQGQCIDHPLSFQQSQVG

Query:  FSNDIRKG
        + +  R G
Subjt:  FSNDIRKG

Q2QM17 Protein YABBY 63.0e-0538.46Show/hide
Query:  PSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTR
        P+E +CYV CNFCNT+LAV++  ++                   +L+ VTV+CGHC+NL  ++ R
Subjt:  PSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTR

Q76EJ0 Protein DROOPING LEAF5.5e-1545.97Show/hide
Query:  MDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQC--IDHPLSFQQSQVGFSNDIRKG
        MDL  PSEHLCYV+C +CNTVLAV +                      RL+DTVTVKCGHC+NLSFLS RPP+       DHPL   Q   G   D R+ 
Subjt:  MDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQC--IDHPLSFQQSQVGFSNDIRKG

Query:  ASTSSSSTSSSMANDSPSANFVVK
              S +S+    SP A FVVK
Subjt:  ASTSSSSTSSSMANDSPSANFVVK

Q8L925 Protein CRABS CLAW3.1e-1846.62Show/hide
Query:  MSSEEKSSMDLAQPS---EHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQV
        M+ EEK +M  ++ S   EHL YV+C+ CNT+LAV + L                    R+LDTVTVKCGHC NLSFL+T PPLQG      L+ Q    
Subjt:  MSSEEKSSMDLAQPS---EHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQV

Query:  GFSNDIRKGASTSSSSTSSSMANDSPSANFVVK
        G  +D +KG+S+SSSS++SS    SPS  FVVK
Subjt:  GFSNDIRKGASTSSSSTSSSMANDSPSANFVVK

Arabidopsis top hitse value%identityAlignment
AT1G69180.1 Plant-specific transcription factor YABBY family protein2.2e-1946.62Show/hide
Query:  MSSEEKSSMDLAQPS---EHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQV
        M+ EEK +M  ++ S   EHL YV+C+ CNT+LAV + L                    R+LDTVTVKCGHC NLSFL+T PPLQG      L+ Q    
Subjt:  MSSEEKSSMDLAQPS---EHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQQSQV

Query:  GFSNDIRKGASTSSSSTSSSMANDSPSANFVVK
        G  +D +KG+S+SSSS++SS    SPS  FVVK
Subjt:  GFSNDIRKGASTSSSSTSSSMANDSPSANFVVK

AT2G26580.1 plant-specific transcription factor YABBY family protein4.8e-0638.24Show/hide
Query:  SEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQ
        +E LCY+ CNFCN +LAV +  S+                   L D VTV+CGHC+NL  ++    LQ
Subjt:  SEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQ

AT2G26580.2 plant-specific transcription factor YABBY family protein4.8e-0638.24Show/hide
Query:  SEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQ
        +E LCY+ CNFCN +LAV +  S+                   L D VTV+CGHC+NL  ++    LQ
Subjt:  SEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRPPLQ

AT2G45190.1 Plant-specific transcription factor YABBY family protein5.7e-0733.33Show/hide
Query:  NSMSSEEKS--SMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRP---PLQGQCIDHPLSFQ
        +SMSS   +  S D   PS+HLCYV+CNFC T+LAV +                    Y  L  TVTV+CG C+NL  ++ R    P   Q     L  Q
Subjt:  NSMSSEEKS--SMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLSTRP---PLQGQCIDHPLSFQ

Query:  QSQVGFSN--DIRKGASTSSSSTSSSMANDSPSAN
             + N  DI +    + S+ +  M N  P+ N
Subjt:  QSQVGFSN--DIRKGASTSSSSTSSSMANDSPSAN

AT4G00180.1 Plant-specific transcription factor YABBY family protein1.1e-0539.73Show/hide
Query:  SMSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNL
        S SS      D    ++ LCYV C+FC+TVLAV++  S+                   L  TVTV+CGHCSNL
Subjt:  SMSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTTGTTCTCGTGGAGCTGATGGGTCTGCAAAAGTGCAGCGCAGGTACGATGCTGAGTATGATCATCTTCTTCACTTCCTTCCGGCCTTCTTCAAAAATTCAATGAGCTC
CGAAGAAAAATCTTCCATGGATTTGGCTCAACCTTCTGAGCATCTCTGTTATGTGAAATGCAACTTCTGCAACACTGTTCTTGCGGTAACCCTCTTGCTTTCTAATCAAT
TTTACATGCAAATTAAAATAATTACTCTCAATATCATCAATTCATATTTACGTTTGTTGGATACAGTGACAGTGAAATGTGGGCATTGCAGTAATCTCTCCTTTTTGAGC
ACAAGACCTCCTTTACAAGGCCAATGCATTGATCATCCTCTGAGCTTTCAGCAGTCTCAGGTTGGCTTCTCCAATGATATCCGAAAGGGCGCTTCGACGTCGTCGTCATC
GACATCGTCTTCAATGGCAAATGATTCCCCCTCTGCAAATTTTGTTGTTAAACGTAGGTCTTCACTGTTCTATCACTACTCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
GTTTGTTCTCGTGGAGCTGATGGGTCTGCAAAAGTGCAGCGCAGGTACGATGCTGAGTATGATCATCTTCTTCACTTCCTTCCGGCCTTCTTCAAAAATTCAATGAGCTC
CGAAGAAAAATCTTCCATGGATTTGGCTCAACCTTCTGAGCATCTCTGTTATGTGAAATGCAACTTCTGCAACACTGTTCTTGCGGTAACCCTCTTGCTTTCTAATCAAT
TTTACATGCAAATTAAAATAATTACTCTCAATATCATCAATTCATATTTACGTTTGTTGGATACAGTGACAGTGAAATGTGGGCATTGCAGTAATCTCTCCTTTTTGAGC
ACAAGACCTCCTTTACAAGGCCAATGCATTGATCATCCTCTGAGCTTTCAGCAGTCTCAGGTTGGCTTCTCCAATGATATCCGAAAGGGCGCTTCGACGTCGTCGTCATC
GACATCGTCTTCAATGGCAAATGATTCCCCCTCTGCAAATTTTGTTGTTAAACGTAGGTCTTCACTGTTCTATCACTACTCTCTTTGA
Protein sequenceShow/hide protein sequence
VCSRGADGSAKVQRRYDAEYDHLLHFLPAFFKNSMSSEEKSSMDLAQPSEHLCYVKCNFCNTVLAVTLLLSNQFYMQIKIITLNIINSYLRLLDTVTVKCGHCSNLSFLS
TRPPLQGQCIDHPLSFQQSQVGFSNDIRKGASTSSSSTSSSMANDSPSANFVVKRRSSLFYHYSL