; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025963 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025963
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEF-hand domain-containing protein
Genome locationscaffold7:591559..593223
RNA-Seq ExpressionSpg025963
SyntenySpg025963
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0000175 - 3'-5'-exoribonuclease activity (molecular function)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597001.1 putative calcium-binding protein, partial [Cucurbita argyrosperma subsp. sororia]2.7e-5573.38Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG
        + G++ NQ+  VS+SEKD       E NDD+IRYST CE LRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE+FLQRL S+ CSEQ EEN NGRT 
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG

Query:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS
          D CNEEEVVGFKVKH VLFPREVEKG WPDGYSLSDHARL V FSPVMLQ S
Subjt:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS

KAG7028468.1 putative calcium-binding protein [Cucurbita argyrosperma subsp. argyrosperma]2.7e-5573.38Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG
        + G++ NQ+  VS+SEKD       E NDD+IRYST CE LRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE+FLQRL S+ CSEQ EEN NGRT 
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG

Query:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS
          D CNEEEVVGFKVKH VLFPREVEKG WPDGYSLSDHARL V FSPVMLQ S
Subjt:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS

XP_023521440.1 uncharacterized calcium-binding protein At1g02270-like [Cucurbita pepo subsp. pepo]1.0e-5473.38Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG
        + G++ NQL  VS+SEKD       E NDD+IRYST CE LRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE+FLQRL S+ CSEQ EEN NGRT 
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG

Query:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS
          D CNEEEVVGFKVKH VLFPREVE G WPDGYSLSDHARL V FSPVMLQ S
Subjt:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS

XP_023521956.1 uncharacterized calcium-binding protein At1g02270-like isoform X1 [Cucurbita pepo subsp. pepo]1.2e-5574.03Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG
        + G++ NQL  VS+SEKD       E NDD+IRYST CE LRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE+FLQRL S+ CSEQ EEN NGRT 
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG

Query:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS
          D CNEEEVVGFKVKH VLFPREVEKG WPDGYSLSDHARL V FSPVMLQ S
Subjt:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS

XP_023538954.1 uncharacterized calcium-binding protein At1g02270-like isoform X1 [Cucurbita pepo subsp. pepo]1.0e-5473.38Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG
        + G++ NQL  VS+SEKD       E NDD+IRYST CE LRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE+FLQRL S+ CSEQ EEN NGRT 
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG

Query:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS
          D CNEEEVVGFKVKH VLFPREVE G WPDGYSLSDHARL V FSPVMLQ S
Subjt:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS

TrEMBL top hitse value%identityAlignment
A0A4U5MN34 Uncharacterized protein5.9e-4862.34Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG
        + G++  QL+  SL E DAFAFLK + ND+ I YS FCE LRQVNLI  PYGLS QE E+LW Q DI+GNG V YEEF + +W+  CSE REEN + RTG
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG

Query:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS
         S++  EEE +GF VK  VLFPRE EKG WP+ YSLSDHA LTVVFSPV +Q S
Subjt:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS

A0A6J1F4U5 uncharacterized calcium-binding protein At1g02270-like isoform X28.0e-5372.08Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG
        + G++ NQ+  VS+SEKD       E NDD+IRYST CE LRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE+FL RL S+ CSEQ EEN NGRT 
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG

Query:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS
          D CNEE VVGFKVKH VLFPREVEKG WPDGYSLSDHARL V FSPVMLQ S
Subjt:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS

A0A6J1FA14 uncharacterized calcium-binding protein At1g02270-like isoform X18.5e-5572.73Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG
        + G++ NQ+  VS+SEKD       E NDD+IRYST CE LRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE+FLQRL S+ CSEQ EEN NGRT 
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG

Query:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS
          D CNEE VVGFKVKH VLFPREVEKG WPDGYSLSDHARL V FSPVMLQ S
Subjt:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS

A0A6J1IFR0 uncharacterized calcium-binding protein At1g02270-like isoform X13.6e-5372.73Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG
        + G++ NQL  VS+SEKD       E NDD+IRYST CE LRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE FLQRL S+ CSEQ EEN NGRT 
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG

Query:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS
          D CN EE VGFKVKH VLFPREVEKG WPDGYSLSDHARL V FSPVMLQ S
Subjt:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS

A0A6J1IH47 uncharacterized calcium-binding protein At1g02270-like isoform X23.3e-5172.08Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG
        + G++ NQL  VS+SEKD       E NDD+IRYST CE LRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE FL RL S+ CSEQ EEN NGRT 
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG

Query:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS
          D CN EE VGFKVKH VLFPREVEKG WPDGYSLSDHARL V FSPVMLQ S
Subjt:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS

SwissProt top hitse value%identityAlignment
O81916 Uncharacterized calcium-binding protein At1g022701.5e-3243.71Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG
        +  ++  QL   S++E DAF FL  + + D + YS FC  L++VNL   P+GLSF+E + LW +AD+DGNG   YEE L+++W+ T   Q          
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG

Query:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVML
           E  E+E +G KV   +LFP+E EKG+WP+ Y++SDHA LTV FSPV +
Subjt:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVML

Arabidopsis top hitse value%identityAlignment
AT1G02270.1 Calcium-binding endonuclease/exonuclease/phosphatase family1.1e-3343.71Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG
        +  ++  QL   S++E DAF FL  + + D + YS FC  L++VNL   P+GLSF+E + LW +AD+DGNG   YEE L+++W+ T   Q          
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG

Query:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVML
           E  E+E +G KV   +LFP+E EKG+WP+ Y++SDHA LTV FSPV +
Subjt:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVML

AT5G54130.2 Calcium-binding endonuclease/exonuclease/phosphatase family4.8e-4253.9Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG
        + G+    LR  SL+ +DAFAFLK + + D I +  FCE LRQ+NL     GL+ +E+++LWTQADIDGNG + Y+EF QR+W+ T SEQR+        
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTG

Query:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS
        G  + N+E+ VGF VK+ VLFP EVEKGMWP+ YSLSDHARLTVVFSP+ +  S
Subjt:  GSDECNEEEVVGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS

AT5G54130.3 Calcium-binding endonuclease/exonuclease/phosphatase family3.6e-0545.83Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLID
        + G+    LR  SL+ +DAFAFLK + + D I +  FCE LRQV ++D
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLID

AT5G54130.4 Calcium-binding endonuclease/exonuclease/phosphatase family3.6e-0545.83Show/hide
Query:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLID
        + G+    LR  SL+ +DAFAFLK + + D I +  FCE LRQV ++D
Subjt:  MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGGCCTCTTAACGAACCAGCTCCGAAACGTTTCACTGTCTGAAAAGGACGCTTTTGCATTTCTTAAGGGTGAAATAAATGATGATATAATTAGATACTCAACTTT
TTGTGAAGTACTTCGCCAAGTAAATTTGATTGATCGCCCTTATGGGTTGAGTTTTCAAGAAATGGAGAATCTGTGGACACAAGCAGACATTGATGGAAACGGTGCAGTCA
GTTATGAAGAATTTCTGCAGAGGCTATGGAGTTATACATGTTCCGAACAGCGAGAGGAAAATGCGAATGGGAGAACTGGGGGCTCTGATGAGTGCAACGAGGAAGAAGTT
GTAGGTTTCAAAGTGAAGCATCTCGTTCTATTTCCTCGGGAAGTTGAGAAAGGGATGTGGCCTGATGGTTATTCCCTCTCCGATCATGCCCGACTTACAGTCGTGTTTTC
ACCAGTAATGCTGCAGTATTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTGGCCTCTTAACGAACCAGCTCCGAAACGTTTCACTGTCTGAAAAGGACGCTTTTGCATTTCTTAAGGGTGAAATAAATGATGATATAATTAGATACTCAACTTT
TTGTGAAGTACTTCGCCAAGTAAATTTGATTGATCGCCCTTATGGGTTGAGTTTTCAAGAAATGGAGAATCTGTGGACACAAGCAGACATTGATGGAAACGGTGCAGTCA
GTTATGAAGAATTTCTGCAGAGGCTATGGAGTTATACATGTTCCGAACAGCGAGAGGAAAATGCGAATGGGAGAACTGGGGGCTCTGATGAGTGCAACGAGGAAGAAGTT
GTAGGTTTCAAAGTGAAGCATCTCGTTCTATTTCCTCGGGAAGTTGAGAAAGGGATGTGGCCTGATGGTTATTCCCTCTCCGATCATGCCCGACTTACAGTCGTGTTTTC
ACCAGTAATGCTGCAGTATTCTTAG
Protein sequenceShow/hide protein sequence
MLGLLTNQLRNVSLSEKDAFAFLKGEINDDIIRYSTFCEVLRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLQRLWSYTCSEQREENANGRTGGSDECNEEEV
VGFKVKHLVLFPREVEKGMWPDGYSLSDHARLTVVFSPVMLQYS