; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025993 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025993
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNA-binding protein
Genome locationscaffold7:2572875..2576498
RNA-Seq ExpressionSpg025993
SyntenySpg025993
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601448.1 Galactoside 2-alpha-L-fucosyltransferase, partial [Cucurbita argyrosperma subsp. sororia]1.2e-9996.88Show/hide
Query:  KGGAMSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQG
        KGGAMSFMKGDLLTRTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGT+KTI LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQG
Subjt:  KGGAMSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQG

Query:  VSEEEAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        VSEEEAM VANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
Subjt:  VSEEEAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

KAG7032230.1 hypothetical protein SDJN02_06273 [Cucurbita argyrosperma subsp. argyrosperma]9.4e-9796.28Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGT+KTI LPEDVYV+KFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAM VANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

XP_022151151.1 uncharacterized protein LOC111019147 [Momordica charantia]3.6e-9696.28Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLL RTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGT+KTI+LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGV EE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAM VANMEYRAEKKVKKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG GW
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

XP_022957544.1 uncharacterized protein LOC111458914 [Cucurbita moschata]3.2e-9796.81Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGT+KTI LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAM VANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

XP_022996766.1 uncharacterized protein LOC111491881 [Cucurbita maxima]2.7e-9696.28Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLL+RTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG VKTI LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAM VANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

TrEMBL top hitse value%identityAlignment
A0A0A0KQQ3 Uncharacterized protein2.1e-8689.73Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLT+TRKLVKGLAKAEPVWLKAMEQAPPP+FPRVDGT+KTI LPEDVYVKKFF+KHPDS Y DAIKFC F+PPPARIF  RVLELKEQGV+EE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG
        EAMTVANMEYRAEKK+KK AYSRLKQIARLQGKKPP NPYPSAIKEIQAEERKFVRDRFF+PKIKEIAQRLKEERAAEMQ+R  G
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG

A0A6J1DDQ7 uncharacterized protein LOC1110191471.7e-9696.28Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLL RTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGT+KTI+LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGV EE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAM VANMEYRAEKKVKKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG GW
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

A0A6J1GZF0 uncharacterized protein LOC1114589141.6e-9796.81Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGT+KTI LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAM VANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

A0A6J1KC52 uncharacterized protein LOC1114918811.3e-9696.28Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLL+RTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG VKTI LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAM VANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

A0A7N2LBH9 Uncharacterized protein9.5e-8786.17Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSF+KGDLLTRTRKLVKGLAK++P+WLKAME APP TFPR DG VK I+LPEDVY+KKFFQKHPDSK+EDAIK CSFDPPPAR+FGLRVL+LKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAM VA+MEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERK+VRDRFFNPKI EI Q+LKEE+AAE QDR RG GW
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26750.1 unknown protein8.8e-5354.84Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MS+MKGDLL++TR+LV GLA  EPVWLKAME +PPP FPR +G ++ I LPED YV+KF  KHP +K +D  K  +F P  AR++G RVLELKE G+SE 
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGS
        +AM+VANMEY +E+K  KKAY RLK++A +Q K PPP PYPSA K +  + +   +DRF  P ++ +  +LK E+   +QDR  GS
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAATAATCGGGGTGAATTTGCTGAGCTATCTAGTTTCATCGTTTAAGTTCTCTTTCGTCAGTAGTTGTATATCCTTGGATCGTATCGAAGTCCAAAAAGGAGG
AGCCATGTCCTTCATGAAAGGAGATTTGCTAACTAGGACTAGAAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCTGTTTGGCTCAAAGCCATGGAACAGGCGCCACCTC
CTACATTTCCTCGAGTGGATGGAACAGTGAAGACAATCAATCTTCCCGAGGATGTATATGTGAAAAAATTCTTCCAGAAACATCCAGATTCAAAATACGAAGATGCCATC
AAGTTTTGTAGTTTCGATCCTCCTCCAGCCCGAATATTTGGCTTGCGAGTGCTTGAACTGAAGGAACAGGGTGTCAGTGAGGAGGAAGCCATGACAGTAGCCAATATGGA
ATACCGGGCAGAGAAAAAGGTGAAGAAGAAGGCTTACTCTCGCTTGAAGCAAATTGCACGTCTTCAAGGGAAGAAACCTCCTCCAAACCCATATCCAAGTGCTATTAAGG
AGATACAAGCTGAGGAAAGGAAATTTGTTCGGGATCGTTTCTTCAACCCCAAGATTAAAGAGATTGCACAGAGGTTGAAGGAGGAGAGAGCAGCTGAAATGCAGGACAGA
ATGCGAGGCAGTGGCTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAATAATCGGGGTGAATTTGCTGAGCTATCTAGTTTCATCGTTTAAGTTCTCTTTCGTCAGTAGTTGTATATCCTTGGATCGTATCGAAGTCCAAAAAGGAGG
AGCCATGTCCTTCATGAAAGGAGATTTGCTAACTAGGACTAGAAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCTGTTTGGCTCAAAGCCATGGAACAGGCGCCACCTC
CTACATTTCCTCGAGTGGATGGAACAGTGAAGACAATCAATCTTCCCGAGGATGTATATGTGAAAAAATTCTTCCAGAAACATCCAGATTCAAAATACGAAGATGCCATC
AAGTTTTGTAGTTTCGATCCTCCTCCAGCCCGAATATTTGGCTTGCGAGTGCTTGAACTGAAGGAACAGGGTGTCAGTGAGGAGGAAGCCATGACAGTAGCCAATATGGA
ATACCGGGCAGAGAAAAAGGTGAAGAAGAAGGCTTACTCTCGCTTGAAGCAAATTGCACGTCTTCAAGGGAAGAAACCTCCTCCAAACCCATATCCAAGTGCTATTAAGG
AGATACAAGCTGAGGAAAGGAAATTTGTTCGGGATCGTTTCTTCAACCCCAAGATTAAAGAGATTGCACAGAGGTTGAAGGAGGAGAGAGCAGCTGAAATGCAGGACAGA
ATGCGAGGCAGTGGCTGGTGA
Protein sequenceShow/hide protein sequence
MDRIIGVNLLSYLVSSFKFSFVSSCISLDRIEVQKGGAMSFMKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQKHPDSKYEDAI
KFCSFDPPPARIFGLRVLELKEQGVSEEEAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDR
MRGSGW