; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026010 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026010
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionnuclear pore complex protein NUP54
Genome locationscaffold7:415792..420952
RNA-Seq ExpressionSpg026010
SyntenySpg026010
Gene Ontology termsGO:0006607 - NLS-bearing protein import into nucleus (biological process)
GO:0006999 - nuclear pore organization (biological process)
GO:0036228 - protein localization to nuclear inner membrane (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR024864 - Nucleoporin Nup54/Nup57/Nup44
IPR025712 - Nucleoporin Nup54, alpha-helical domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573649.1 Nuclear pore complex protein NUP54, partial [Cucurbita argyrosperma subsp. sororia]5.8e-18492.08Show/hide
Query:  FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAATGFGFQTPFAA
        FG   S+ AFGTPQSTPAFGTP+STPAFGTPSASPAFGN SSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQ QQQQQQSPLFQ PAATGFGFQTPFAA
Subjt:  FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAATGFGFQTPFAA

Query:  PPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD
        P  SPFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQY+AKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD
Subjt:  PPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD

Query:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS
        LSQRLKIQDEVILSDAERL+MTQSNVK LQRHFLADTLPW+QRLKQKEQGLQRRLLR+MR+VEALESKGCRVP+M GEAELAE+LALITRQL+GSGAELS
Subjt:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS

Query:  RRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        RRV+NLLTIT GQ+NGSGAGNSIYLQGS KIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DD S
Subjt:  RRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_004135312.1 nuclear pore complex protein NUP54 [Cucumis sativus]1.1e-18792.29Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAAT
        MFGAQPSSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS+SSFATGFGSSLFSTPFSSQPSQQQQQ QQSP+F Q +AT
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAAT

Query:  GFGFQTPFAAPPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPF AP  +PFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQY+ KP GVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSD+ERL+MTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELSRRVQNLLT+TRGQ+NGSG GNSIY QGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_008446043.1 PREDICTED: nuclear pore complex protein NUP54 [Cucumis melo]2.5e-18792.8Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAAT
        MFGAQ SSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS+SSFATGFGSSLFSTPFSSQPSQQQQQ QQS LF Q +AT
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAAT

Query:  GFGFQTPFAAPPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAP  +PFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQY+AKP GVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSD+ERL+MTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELS+RVQNLLTITRGQ+NGSG GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_022151739.1 nuclear pore complex protein NUP54 [Momordica charantia]7.1e-19094.47Show/hide
Query:  MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAATGFGFQTPFA
        MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPS+S+F TGFGSSLFSTPFSSQPSQQ QQQQQSPLFQQP ATGFGFQTPFA
Subjt:  MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAATGFGFQTPFA

Query:  APPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFK
        AP  +PFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ++AKPAGVSDIMWAEAM KLEGMESADRERLWPQLVQGFK
Subjt:  APPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFK

Query:  DLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL
        DLSQRLKIQDEVILSDAERL+MTQSNVKMLQRHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL
Subjt:  DLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL

Query:  SRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        SRRVQNLLT TRGQ+NGS +GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DDAS
Subjt:  SRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_038893426.1 nuclear pore complex protein NUP54 [Benincasa hispida]2.1e-18993.32Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAAT
        MFGAQPSSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS+SSFATGFGSSLFSTPFSSQPSQ QQQ QQSPLF QPAAT
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAAT

Query:  GFGFQTPFAAPPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAP  +PFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQY+ KPAGVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSD++RL+MTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELSRRVQNLLTITRGQ+NGS AGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAED+EM DDAS
Subjt:  QLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

TrEMBL top hitse value%identityAlignment
A0A0A0KPW8 Nup54 domain-containing protein5.5e-18892.29Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAAT
        MFGAQPSSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS+SSFATGFGSSLFSTPFSSQPSQQQQQ QQSP+F Q +AT
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAAT

Query:  GFGFQTPFAAPPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPF AP  +PFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQY+ KP GVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSD+ERL+MTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELSRRVQNLLT+TRGQ+NGSG GNSIY QGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A1S3BE47 nuclear pore complex protein NUP541.2e-18792.8Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAAT
        MFGAQ SSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS+SSFATGFGSSLFSTPFSSQPSQQQQQ QQS LF Q +AT
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAAT

Query:  GFGFQTPFAAPPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAP  +PFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQY+AKP GVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSD+ERL+MTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELS+RVQNLLTITRGQ+NGSG GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A5A7SSX4 Nuclear pore complex protein NUP541.2e-18792.8Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAAT
        MFGAQ SSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS+SSFATGFGSSLFSTPFSSQPSQQQQQ QQS LF Q +AT
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAAT

Query:  GFGFQTPFAAPPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAP  +PFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQY+AKP GVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSD+ERL+MTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELS+RVQNLLTITRGQ+NGSG GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A6J1DDY9 nuclear pore complex protein NUP543.4e-19094.47Show/hide
Query:  MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAATGFGFQTPFA
        MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPS+S+F TGFGSSLFSTPFSSQPSQQ QQQQQSPLFQQP ATGFGFQTPFA
Subjt:  MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAATGFGFQTPFA

Query:  APPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFK
        AP  +PFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ++AKPAGVSDIMWAEAM KLEGMESADRERLWPQLVQGFK
Subjt:  APPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFK

Query:  DLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL
        DLSQRLKIQDEVILSDAERL+MTQSNVKMLQRHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL
Subjt:  DLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL

Query:  SRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        SRRVQNLLT TRGQ+NGS +GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DDAS
Subjt:  SRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A6J1G105 nuclear pore complex protein NUP542.0e-18291.82Show/hide
Query:  FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAATGFGFQTPFAA
        FG   S+ AFGTPQSTPAFGTP STPAFGTPSASPAFGN SSTPAFGTPSSSSFATGFGSSLFSTPFSSQPS  QQQQQQSPLFQ PAATGFGFQTPFAA
Subjt:  FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAATGFGFQTPFAA

Query:  PPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD
        P  SPFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQY+AKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD
Subjt:  PPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD

Query:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS
        LSQRLKIQDEVILSDAERL+MTQSNVK LQRHFLADTLPW+QRLKQKEQGLQRRLLR+MR+VEALESKGCRVP+M GEAELAE+LALITRQL+GSGAELS
Subjt:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS

Query:  RRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        RRV+NLLTIT GQ+NGSGAGNSIYLQGS KIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DD S
Subjt:  RRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

SwissProt top hitse value%identityAlignment
P70582 Nuclear pore complex protein Nup546.4e-0827.45Show/hide
Query:  PAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE
        PAGV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +   ++  LQ++    T+  + + K+K   L  R L+V+   E
Subjt:  PAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE

Query:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD
             G    +   E +L  +L  I  +L  +  +   R+  L++  R Q N  GA  S   +    I    L ++++ L+QQ E ++ L +++K D+ D
Subjt:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD

Query:  MEII
        ++++
Subjt:  MEII

Q7Z3B4 Nucleoporin p542.4e-0726.96Show/hide
Query:  PAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE
        PAGV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +   ++  LQ++    ++  + + K+K   L  R L+V+   E
Subjt:  PAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE

Query:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD
             G    +   E +L  +L  I  +L  +  +   R+  L++  R Q N  GA  S   +    I    L ++++ L+QQ E ++ L +++K D+ D
Subjt:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD

Query:  MEII
        ++++
Subjt:  MEII

Q8BTS4 Nuclear pore complex protein Nup546.4e-0827.45Show/hide
Query:  PAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE
        PAGV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +   ++  LQ++    T+  + + K+K   L  R L+V+   E
Subjt:  PAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE

Query:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD
             G    +   E +L  +L  I  +L  +  +   R+  L++  R Q N  GA  S   +    I    L ++++ L+QQ E ++ L +++K D+ D
Subjt:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD

Query:  MEII
        ++++
Subjt:  MEII

Q8GYF7 Nuclear pore complex protein NUP549.2e-14071.96Show/hide
Query:  FGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFAT-GFGSSLFSTPFSSQPSQQQQQQQQ----SPLFQQPAATGFGFQTPF----AA
        FGTP S+P+FGTPSSTPAFGT  +SPAFG  S+TPAFGTPS+ SF++ GFGSSLFS+PFSSQ  QQQQQQQQ    S LFQQ  ++ FGFQ+PF      
Subjt:  FGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFAT-GFGSSLFSTPFSSQPSQQQQQQQQ----SPLFQQPAATGFGFQTPF----AA

Query:  PPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD
           +PFPNAQLTTQMAPVAP+P+SLADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQY+ KPA VSDIMWAEAM+KLEGM+S +RERLWPQLVQGFKD
Subjt:  PPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD

Query:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS
        LSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P ++RL+QKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Subjt:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS

Query:  RRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA
        RRVQ+L TI+R Q+N   AG+S+YL GS KI EQSL DMQEVLQQ+TEAI RLGNVLKRD+RDMEI++AED EMA D+
Subjt:  RRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA

Q9VDV3 Nuclear pore complex protein Nup587.8e-0637.8Show/hide
Query:  FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAATGFGFQTP-FA
        FG   ++ AFG P +T AFG P++TPAFG  +A+PAFG  ++TPAFG P+++S    FG+   +T F +  S Q              A  F F TP  +
Subjt:  FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAATGFGFQTP-FA

Query:  APPFSPFPNAQLTTQMAPVAPLPFSLA
        AP  +P      TT     A +P SL+
Subjt:  APPFSPFPNAQLTTQMAPVAPLPFSLA

Arabidopsis top hitse value%identityAlignment
AT1G24310.1 unknown protein6.5e-14171.96Show/hide
Query:  FGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFAT-GFGSSLFSTPFSSQPSQQQQQQQQ----SPLFQQPAATGFGFQTPF----AA
        FGTP S+P+FGTPSSTPAFGT  +SPAFG  S+TPAFGTPS+ SF++ GFGSSLFS+PFSSQ  QQQQQQQQ    S LFQQ  ++ FGFQ+PF      
Subjt:  FGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFAT-GFGSSLFSTPFSSQPSQQQQQQQQ----SPLFQQPAATGFGFQTPF----AA

Query:  PPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD
           +PFPNAQLTTQMAPVAP+P+SLADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQY+ KPA VSDIMWAEAM+KLEGM+S +RERLWPQLVQGFKD
Subjt:  PPFSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD

Query:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS
        LSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P ++RL+QKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Subjt:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS

Query:  RRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA
        RRVQ+L TI+R Q+N   AG+S+YL GS KI EQSL DMQEVLQQ+TEAI RLGNVLKRD+RDMEI++AED EMA D+
Subjt:  RRVQNLLTITRGQSNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGGAGCTCAACCGTCCTCCTCCGCCTTCGGCACTCCACAGTCAACTCCGGCCTTCGGCACGCCGTCGTCCACTCCTGCCTTCGGAACTCCATCGGCCTCTCCGGC
ATTTGGAAATCTTTCCTCAACTCCTGCCTTCGGAACTCCATCTTCGTCGTCTTTTGCCACCGGCTTCGGCTCGTCTCTCTTCTCCACTCCATTCTCTTCTCAGCCTTCAC
AACAGCAACAGCAGCAGCAGCAATCGCCGCTGTTTCAGCAACCAGCCGCTACAGGATTCGGTTTCCAGACTCCGTTTGCAGCGCCTCCGTTCAGTCCATTTCCAAATGCT
CAATTGACCACTCAGATGGCGCCGGTGGCGCCGCTTCCTTTCTCTCTGGCAGATCGAGATATTCAAGCAATTGTTGAGGCTTACAAGGACGACGCAGGAAACCCTAAGTA
TGCTTTCAAGCATTTGTTGTTCAGTGTTACTGATCCTCAATATAAGGCGAAGCCGGCTGGTGTATCGGATATAATGTGGGCTGAGGCTATGGCAAAGCTTGAAGGCATGG
AAAGTGCTGATAGAGAGCGATTGTGGCCACAGCTTGTTCAAGGTTTCAAGGATTTATCTCAGCGCTTGAAGATTCAAGATGAAGTCATTCTTTCTGATGCTGAGAGACTG
CAGATGACCCAAAGCAACGTCAAAATGCTTCAGAGGCATTTTCTGGCTGATACTCTACCTTGGGTCCAAAGATTGAAACAGAAGGAGCAAGGTCTTCAAAGGCGTCTTTT
GAGAGTTATGAGAATTGTGGAGGCATTAGAAAGCAAGGGTTGCCGAGTGCCTGTAATGAAAGGGGAGGCTGAATTGGCTGAGAAGTTAGCTTTGATAACGAGGCAGTTGA
AAGGATCTGGGGCAGAGCTTTCGAGGAGGGTACAAAATTTGCTTACAATTACTCGTGGTCAATCAAATGGCTCCGGTGCTGGTAATTCCATCTATCTTCAAGGATCGGCA
AAAATACACGAACAGAGCCTTGCTGATATGCAGGAGGTTTTGCAGCAGCAGACCGAGGCCATTGCTAGACTTGGAAATGTTTTAAAACGAGATGTTAGAGACATGGAAAT
CATAATGGCCGAAGACAAAGAGATGGCAGATGATGCGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGGAGCTCAACCGTCCTCCTCCGCCTTCGGCACTCCACAGTCAACTCCGGCCTTCGGCACGCCGTCGTCCACTCCTGCCTTCGGAACTCCATCGGCCTCTCCGGC
ATTTGGAAATCTTTCCTCAACTCCTGCCTTCGGAACTCCATCTTCGTCGTCTTTTGCCACCGGCTTCGGCTCGTCTCTCTTCTCCACTCCATTCTCTTCTCAGCCTTCAC
AACAGCAACAGCAGCAGCAGCAATCGCCGCTGTTTCAGCAACCAGCCGCTACAGGATTCGGTTTCCAGACTCCGTTTGCAGCGCCTCCGTTCAGTCCATTTCCAAATGCT
CAATTGACCACTCAGATGGCGCCGGTGGCGCCGCTTCCTTTCTCTCTGGCAGATCGAGATATTCAAGCAATTGTTGAGGCTTACAAGGACGACGCAGGAAACCCTAAGTA
TGCTTTCAAGCATTTGTTGTTCAGTGTTACTGATCCTCAATATAAGGCGAAGCCGGCTGGTGTATCGGATATAATGTGGGCTGAGGCTATGGCAAAGCTTGAAGGCATGG
AAAGTGCTGATAGAGAGCGATTGTGGCCACAGCTTGTTCAAGGTTTCAAGGATTTATCTCAGCGCTTGAAGATTCAAGATGAAGTCATTCTTTCTGATGCTGAGAGACTG
CAGATGACCCAAAGCAACGTCAAAATGCTTCAGAGGCATTTTCTGGCTGATACTCTACCTTGGGTCCAAAGATTGAAACAGAAGGAGCAAGGTCTTCAAAGGCGTCTTTT
GAGAGTTATGAGAATTGTGGAGGCATTAGAAAGCAAGGGTTGCCGAGTGCCTGTAATGAAAGGGGAGGCTGAATTGGCTGAGAAGTTAGCTTTGATAACGAGGCAGTTGA
AAGGATCTGGGGCAGAGCTTTCGAGGAGGGTACAAAATTTGCTTACAATTACTCGTGGTCAATCAAATGGCTCCGGTGCTGGTAATTCCATCTATCTTCAAGGATCGGCA
AAAATACACGAACAGAGCCTTGCTGATATGCAGGAGGTTTTGCAGCAGCAGACCGAGGCCATTGCTAGACTTGGAAATGTTTTAAAACGAGATGTTAGAGACATGGAAAT
CATAATGGCCGAAGACAAAGAGATGGCAGATGATGCGAGTTAA
Protein sequenceShow/hide protein sequence
MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQPAATGFGFQTPFAAPPFSPFPNA
QLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERL
QMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSGAGNSIYLQGSA
KIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS