CuGenDBv2

Gene ID	Spg026121
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription factor TCP8
Genome location	scaffold7:199432..200802
RNA-Seq Expression	Spg026121
Synteny	Spg026121
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0012505 - endomembrane system (cellular component) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domains	IPR005333 - Transcription factor, TCP

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601620.1 Transcription factor TCP8, partial [Cucurbita argyrosperma subsp. sororia]

4.3e-71

77.31

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Query:  DLFKEDTQSQGESSGG-GSPKAIKSDPQVVK----QQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAMEAQMWPFSTSG
        DLFKEDTQS GESSGG GSPKAIKSD Q+ K    QQSAS+  +R ATAMWAVA  PSSGASNTFWMLPVTTGSGG NVGSSGA  G MEAQMWPFSTS 
Subjt:  DLFKEDTQSQGESSGG-GSPKAIKSDPQVVK----QQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAMEAQMWPFSTSG

Query:  NTLQAPLHFMPRFNIPGGVEFQ----GAGGGGRASQLQLGSMLM----QQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQNHPLEHHHPNAP
        NTLQAPLHFMPRFNIPGGVE Q     AGGGGRA QLQLGSMLM    QQQ  Q LGLGVSESNLGVLAALN AYSRGG N NSDHH NH    HH NAP
Subjt:  NTLQAPLHFMPRFNIPGGVEFQ----GAGGGGRASQLQLGSMLM----QQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQNHPLEHHHPNAP

Query:  EP---DSGDEAPNTSQ
        +P   DSGDE PNTSQ
Subjt:  EP---DSGDEAPNTSQ

KAG7032379.1 Transcription factor TCP8, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.6e-71

77.93

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Query:  DLFKEDTQSQGESSGG-GSPKAIKSDPQVVKQQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAMEAQMWPFSTSGNTLQ
        DLFKEDTQS GESSGG GSPKAIKSD Q+ KQQS+S   +R ATAMWAVA  PSSGASNTFWMLPVTTGSGG NVGSSGA  G MEAQMWPFSTS NTLQ
Subjt:  DLFKEDTQSQGESSGG-GSPKAIKSDPQVVKQQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAMEAQMWPFSTSGNTLQ

Query:  APLHFMPRFNIPGGVEFQ----GAGGGGRASQLQLGSMLM-----QQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQNHPLEHHHPNAPEP-
        APLHFMPRFNIPGGVE Q     AGGGGRA QLQLGSMLM     QQQ  Q LGLGVSESNLGVLAALN AYSRGG N NSDHH NH    HH NAP+P 
Subjt:  APLHFMPRFNIPGGVEFQ----GAGGGGRASQLQLGSMLM-----QQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQNHPLEHHHPNAPEP-

Query:  --DSGDEAPNTSQ
          DSGDE PNTSQ
Subjt:  --DSGDEAPNTSQ

XP_022957062.1 transcription factor TCP8 [Cucurbita moschata]

4.7e-70

75.8

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Query:  DLFKEDTQSQGESSGG-GSPKAIKSDPQVVK----QQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAMEAQMWPFSTSG
        DLFKEDTQS GESSGG GSPKAIKSD Q+ K    QQSAS+  +R ATAMWAVA  PSSGASNTFWMLPVTTGSGG NVGSSGA  G MEAQMWPFSTS 
Subjt:  DLFKEDTQSQGESSGG-GSPKAIKSDPQVVK----QQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAMEAQMWPFSTSG

Query:  NTLQAPLHFMPRFNIPGGVEFQ----GAGGGGRASQLQLGSMLM-------QQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQNHPLEHHHP
        NTLQAPLHFMPRFNIPGGVE Q     AGGGGRA QLQLGSMLM       QQQ  Q LGLGVSESNLGVLAALN AYSRGG N NSDHH NH    HH 
Subjt:  NTLQAPLHFMPRFNIPGGVEFQ----GAGGGGRASQLQLGSMLM-------QQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQNHPLEHHHP

Query:  NAPEP---DSGDEAPNTSQ
        NAP+P   DSGDE P TSQ
Subjt:  NAPEP---DSGDEAPNTSQ

XP_022997787.1 transcription factor TCP8 [Cucurbita maxima]

2.1e-70

75.57

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Query:  DLFKEDTQSQGESSGG-GSPKAIKSDPQVVK----QQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAMEAQMWPFSTSG
        DLFKEDTQS GESSGG GSPKAIKSD Q+ K    QQSAS+  +R ATAMWAVA  PSSGASNTFWMLPVTTGSGG NVGSSGA  G MEAQMWPFSTS 
Subjt:  DLFKEDTQSQGESSGG-GSPKAIKSDPQVVK----QQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAMEAQMWPFSTSG

Query:  NTLQAPLHFMPRFNIPGGVEFQ----GAGGGGRASQLQLGSMLM---------QQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQNHPLEHH
        NTLQAPLHFMPRFNIPGGVE Q     AGGGGRA QLQLGSMLM         QQQ  Q LGLGVSESNLGVLAALN AYSRGG N NSDHH NH    H
Subjt:  NTLQAPLHFMPRFNIPGGVEFQ----GAGGGGRASQLQLGSMLM---------QQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQNHPLEHH

Query:  HPNAPEP---DSGDEAPNTSQ
        H NAP+P   DSGDE PNTSQ
Subjt:  HPNAPEP---DSGDEAPNTSQ

XP_023542114.1 transcription factor TCP8 [Cucurbita pepo subsp. pepo]

1.2e-70

75.91

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Query:  DLFKEDTQSQGESSGG-GSPKAIKSDPQVVK----QQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAMEAQMWPFSTSG
        DLFKEDTQS GESSGG GSPKAIKSD Q+ K    QQSAS+  +R ATAMWAVA  PSSGASNTFWMLPVTTGSGG NVGSSGA  G MEAQMWPFSTS 
Subjt:  DLFKEDTQSQGESSGG-GSPKAIKSDPQVVK----QQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAMEAQMWPFSTSG

Query:  NTLQAPLHFMPRFNIPGGVEFQ----GAGGGGRASQLQLGSMLM--------QQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQNHPLEHHH
        NTLQAPLHFMPRFNIPGGVE Q     AGGGGRA QLQLGSMLM        QQQ  Q LGLGVSESNLGVLAALN AYSRGG N NSDHH NH    HH
Subjt:  NTLQAPLHFMPRFNIPGGVEFQ----GAGGGGRASQLQLGSMLM--------QQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQNHPLEHHH

Query:  PNAPEP---DSGDEAPNTSQ
         NAP+P   DSGDE PNTSQ
Subjt:  PNAPEP---DSGDEAPNTSQ

TrEMBL top hits

e value

%identity

Alignment

A0A061DWY9 TCP family transcription factor

1.2e-55

63.47

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Query:  DLFKEDTQSQGES-------SGGGSP-KAIKSD-PQVVK--QQSASAGQVR-----AATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAM
        DLFK+D Q QGES       SG GSP KA KS   Q+ K  Q + S+G +R      ATAMWAVAP PSSGA +TFWMLPVT G+GG +V +  +G+G  
Subjt:  DLFKEDTQSQGES-------SGGGSP-KAIKSD-PQVVK--QQSASAGQVR-----AATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAM

Query:  EAQMWPFST----SGNTLQAPLHFMPRFNIPGGVEFQGAGGGGRASQLQLGSMLMQQQPTQHLGLGVSESNLGVLAALNAYSRGGLNMNSDHHQNHPLEH
        E QMWPF T    SGNTLQAPLHF+PRFN+PG VEFQ    GGR S LQLGSMLMQQQP+QHLGLG+SESNLG+LAALNAYSRGG N+NS+  QN+PLEH
Subjt:  EAQMWPFST----SGNTLQAPLHFMPRFNIPGGVEFQGAGGGGRASQLQLGSMLMQQQPTQHLGLGVSESNLGVLAALNAYSRGGLNMNSDHHQNHPLEH

Query:  HHPNAPEPDSGDEAPNTSQ
        H       DSGDE PN SQ
Subjt:  HHPNAPEPDSGDEAPNTSQ

A0A2N9HI21 TCP domain-containing protein

1.4e-54

62.67

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Query:  DLFKEDTQS-QGESSGGG------SPKAIKSD-PQVVKQQ-------SASAGQVR-----AATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAG
        DLFKED QS QGES GGG      S K+ KS   Q+ KQQ       + S+G +R      ATAMWAVAP PSSG  +TFWMLPVT G GG +V ++ +G
Subjt:  DLFKEDTQS-QGESSGGG------SPKAIKSD-PQVVKQQ-------SASAGQVR-----AATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAG

Query:  SGAME-AQMWPF----STSGNTLQAPLHFMPRFNIPGGVEFQGAGGGGRASQLQLGSMLMQQQPTQHLGLGVSESNLGVLAALNAYSRGGLNMNSDHHQN
        +G  E + MW F    + SGNTLQAPLHFMPRFN+PGG+EFQG     R S LQLGSMLM QQP+QHLGLGVSESNLG+LAALNAYSRGGLNMNSD  QN
Subjt:  SGAME-AQMWPF----STSGNTLQAPLHFMPRFNIPGGVEFQGAGGGGRASQLQLGSMLMQQQPTQHLGLGVSESNLGVLAALNAYSRGGLNMNSDHHQN

Query:  HPLEHHHPNAPE-PDSGDEAPNTSQ
        HPLE HH + P+  DSGDE PN+SQ
Subjt:  HPLEHHHPNAPE-PDSGDEAPNTSQ

A0A6J1GY49 transcription factor TCP8

2.3e-70

75.8

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Query:  DLFKEDTQSQGESSGG-GSPKAIKSDPQVVK----QQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAMEAQMWPFSTSG
        DLFKEDTQS GESSGG GSPKAIKSD Q+ K    QQSAS+  +R ATAMWAVA  PSSGASNTFWMLPVTTGSGG NVGSSGA  G MEAQMWPFSTS 
Subjt:  DLFKEDTQSQGESSGG-GSPKAIKSDPQVVK----QQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAMEAQMWPFSTSG

Query:  NTLQAPLHFMPRFNIPGGVEFQ----GAGGGGRASQLQLGSMLM-------QQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQNHPLEHHHP
        NTLQAPLHFMPRFNIPGGVE Q     AGGGGRA QLQLGSMLM       QQQ  Q LGLGVSESNLGVLAALN AYSRGG N NSDHH NH    HH 
Subjt:  NTLQAPLHFMPRFNIPGGVEFQ----GAGGGGRASQLQLGSMLM-------QQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQNHPLEHHHP

Query:  NAPEP---DSGDEAPNTSQ
        NAP+P   DSGDE P TSQ
Subjt:  NAPEP---DSGDEAPNTSQ

A0A6J1GY49 transcription factor TCP8

1.6e-02

51.9

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Query:  MGSISTLVSLPHPSSSSSSNSSSSPSSASASASASAPPPHLLDASLDLFKEDTQSQGESSGGGSPKAIKSDPQVVKQQS
        MGSISTLVSLP PSSS+S  +SSS SS+S+S+SA APPPHLLDASL +      +   S    S  A  S+   +K+ +
Subjt:  MGSISTLVSLPHPSSSSSSNSSSSPSSASASASASAPPPHLLDASLDLFKEDTQSQGESSGGGSPKAIKSDPQVVKQQS

A0A6J1GY49 transcription factor TCP8

9.4e-56

62.56

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Query:  DLFKEDTQSQGES-------SGGGSP-KAIKSDPQVV---KQQSASAGQVR-----AATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAM
        DLFK+D Q QGES       SG GSP KA KS    +   +Q + S+G +R      ATAMWAVAP PSSGA +TFWMLPVT G+GG +V +  +G+G  
Subjt:  DLFKEDTQSQGES-------SGGGSP-KAIKSDPQVV---KQQSASAGQVR-----AATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAM

Query:  EAQMWPFST----SGNTLQAPLHFMPRFNIPGGVEFQGAGGGGRASQLQLGSMLMQQQPTQHLGLGVSESNLGVLAALNAYSRGGLNMNSDHHQNHPLEH
        E QMWPF T    SGNTLQAPLHF+PRFN+PG VEFQ    GGR S LQLGSMLMQQQP+QHLGLG+SESNLG+LAALNAYSRGG N+NS+  QN+PLEH
Subjt:  EAQMWPFST----SGNTLQAPLHFMPRFNIPGGVEFQGAGGGGRASQLQLGSMLMQQQPTQHLGLGVSESNLGVLAALNAYSRGGLNMNSDHHQNHPLEH

Query:  HHPNAPEPDSGDEAPNTSQ
        H       DSGDE PN SQ
Subjt:  HHPNAPEPDSGDEAPNTSQ

A0A6J1K618 transcription factor TCP8

1.0e-70

75.57

Show/hide

Query:  DLFKEDTQSQGESSGG-GSPKAIKSDPQVVK----QQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAMEAQMWPFSTSG
        DLFKEDTQS GESSGG GSPKAIKSD Q+ K    QQSAS+  +R ATAMWAVA  PSSGASNTFWMLPVTTGSGG NVGSSGA  G MEAQMWPFSTS 
Subjt:  DLFKEDTQSQGESSGG-GSPKAIKSDPQVVK----QQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSSGAGSGAMEAQMWPFSTSG

Query:  NTLQAPLHFMPRFNIPGGVEFQ----GAGGGGRASQLQLGSMLM---------QQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQNHPLEHH
        NTLQAPLHFMPRFNIPGGVE Q     AGGGGRA QLQLGSMLM         QQQ  Q LGLGVSESNLGVLAALN AYSRGG N NSDHH NH    H
Subjt:  NTLQAPLHFMPRFNIPGGVEFQ----GAGGGGRASQLQLGSMLM---------QQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQNHPLEHH

Query:  HPNAPEP---DSGDEAPNTSQ
        H NAP+P   DSGDE PNTSQ
Subjt:  HPNAPEP---DSGDEAPNTSQ

SwissProt top hits

e value

%identity

Alignment

Q9C518 Transcription factor TCP8

3.7e-17

41.59

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Query:  SLDLFKE-DTQSQGESSGGGSPKAIKSDPQVVKQQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSS--GAGSGAMEAQMWPFSTS-
        S+DL KE D + Q E+      K++K        +S ++G    A  MWAVAP   SGA NTFWMLPV T +G     SS     +G     MWPF  S 
Subjt:  SLDLFKE-DTQSQGESSGGGSPKAIKSDPQVVKQQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSS--GAGSGAMEAQMWPFSTS-

Query:  ----GNTLQAPLHFMPRFNIPGGVEFQGAGGGGRASQLQLGSMLMQQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQ-NHPLEHHHPNAP--
            G    A  HFM       G  F       R S LQLGS L Q QPTQ+LGL + +SNLG+LAALN AYSRGG N N++  Q N+ +EH        
Subjt:  ----GNTLQAPLHFMPRFNIPGGVEFQGAGGGGRASQLQLGSMLMQQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQ-NHPLEHHHPNAP--

Query:  -EPDSGDEAPNTSQ
         + DS +E  N+S+
Subjt:  -EPDSGDEAPNTSQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G58100.1 TCP family transcription factor

2.6e-18

41.59

Show/hide

Query:  SLDLFKE-DTQSQGESSGGGSPKAIKSDPQVVKQQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSS--GAGSGAMEAQMWPFSTS-
        S+DL KE D + Q E+      K++K        +S ++G    A  MWAVAP   SGA NTFWMLPV T +G     SS     +G     MWPF  S 
Subjt:  SLDLFKE-DTQSQGESSGGGSPKAIKSDPQVVKQQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSS--GAGSGAMEAQMWPFSTS-

Query:  ----GNTLQAPLHFMPRFNIPGGVEFQGAGGGGRASQLQLGSMLMQQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQ-NHPLEHHHPNAP--
            G    A  HFM       G  F       R S LQLGS L Q QPTQ+LGL + +SNLG+LAALN AYSRGG N N++  Q N+ +EH        
Subjt:  ----GNTLQAPLHFMPRFNIPGGVEFQGAGGGGRASQLQLGSMLMQQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQ-NHPLEHHHPNAP--

Query:  -EPDSGDEAPNTSQ
         + DS +E  N+S+
Subjt:  -EPDSGDEAPNTSQ

AT1G58100.2 TCP family transcription factor

2.6e-18

41.59

Show/hide

Query:  SLDLFKE-DTQSQGESSGGGSPKAIKSDPQVVKQQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSS--GAGSGAMEAQMWPFSTS-
        S+DL KE D + Q E+      K++K        +S ++G    A  MWAVAP   SGA NTFWMLPV T +G     SS     +G     MWPF  S 
Subjt:  SLDLFKE-DTQSQGESSGGGSPKAIKSDPQVVKQQSASAGQVRAATAMWAVAPGPSSGASNTFWMLPVTTGSGGGNVGSS--GAGSGAMEAQMWPFSTS-

Query:  ----GNTLQAPLHFMPRFNIPGGVEFQGAGGGGRASQLQLGSMLMQQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQ-NHPLEHHHPNAP--
            G    A  HFM       G  F       R S LQLGS L Q QPTQ+LGL + +SNLG+LAALN AYSRGG N N++  Q N+ +EH        
Subjt:  ----GNTLQAPLHFMPRFNIPGGVEFQGAGGGGRASQLQLGSMLMQQQPTQHLGLGVSESNLGVLAALN-AYSRGGLNMNSDHHQ-NHPLEHHHPNAP--

Query:  -EPDSGDEAPNTSQ
         + DS +E  N+S+
Subjt:  -EPDSGDEAPNTSQ

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGCTCCATCTCCACTCTTGTCTCCCTCCCTCATCCCTCTTCTTCTTCCTCTTCCAATTCTTCTTCCTCACCTTCCTCAGCCTCAGCCTCCGCCTCCGCCTCCGCCCC
TCCTCCCCACCTCCTCGACGCCTCACTCGATCTGTTTAAAGAGGATACGCAATCTCAAGGGGAGAGCAGCGGCGGTGGATCTCCGAAAGCAATTAAGAGCGATCCACAAG
TAGTGAAGCAGCAGTCAGCGTCTGCAGGGCAAGTCCGGGCGGCGACGGCGATGTGGGCGGTGGCACCGGGTCCCAGCAGTGGAGCGAGCAACACGTTTTGGATGTTGCCA
GTGACAACAGGTTCGGGCGGGGGAAATGTGGGGAGTAGTGGGGCAGGGAGCGGGGCAATGGAAGCTCAGATGTGGCCATTCTCGACGAGTGGAAACACATTGCAAGCGCC
ATTACATTTCATGCCAAGATTCAACATCCCCGGTGGGGTGGAATTCCAAGGAGCTGGAGGAGGAGGAAGAGCGAGCCAGTTGCAGCTGGGGTCCATGTTAATGCAGCAAC
AACCCACACAGCATCTTGGGCTGGGAGTATCGGAGTCGAATTTGGGAGTGTTGGCTGCTCTCAATGCGTATTCGAGAGGCGGTTTGAATATGAATTCAGATCATCACCAG
AATCATCCATTGGAGCATCATCATCCCAACGCACCTGAGCCTGATAGTGGGGACGAAGCTCCAAACACTTCCCAATGA

mRNA sequence

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Protein sequence

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MGSISTLVSLPHPSSSSSSNSSSSPSSASASASASAPPPHLLDASLDLFKEDTQSQGESSGGGSPKAIKSDPQVVKQQSASAGQVRAATAMWAVAPGPSSGASNTFWMLP
VTTGSGGGNVGSSGAGSGAMEAQMWPFSTSGNTLQAPLHFMPRFNIPGGVEFQGAGGGGRASQLQLGSMLMQQQPTQHLGLGVSESNLGVLAALNAYSRGGLNMNSDHHQ
NHPLEHHHPNAPEPDSGDEAPNTSQ

Spg026121 (gene) of Sponge gourd (cylindrica) v1 genome