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Spg026147 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026147
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGCK domain-containing protein
Genome locationscaffold7:2594847..2596379
RNA-Seq ExpressionSpg026147
SyntenySpg026147
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsIPR012891 - GCK


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601449.1 hypothetical protein SDJN03_06682, partial [Cucurbita argyrosperma subsp. sororia]6.5e-6685Show/hide
Query:  MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKED
        MSTS SK QDAESNAAA AK+ EDQQQ G+P HSEEKS E+SGQSGK+ E+GGEDEGGEDL+EEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKED
Subjt:  MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKED

Query:  IVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLD
        IVEKCFE+TGALKKCMEAHADYYEPILKAEK+AE EAIIELEKE TPNATQQ+T+S DL+
Subjt:  IVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLD

KAG7032232.1 hypothetical protein SDJN02_06275, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-6685Show/hide
Query:  MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKED
        MSTS SK QDAESNAAA AK+ EDQQQ G+P HSEEKS E+SGQSGK+ E+GGEDEGGEDL+EEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKED
Subjt:  MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKED

Query:  IVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLD
        IVEKCFE+TGALKKCMEAHADYYEPILKAEK+AE EAIIELEKE TPNATQQ+T+S DL+
Subjt:  IVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLD

XP_022997117.1 uncharacterized protein LOC111492108 [Cucurbita maxima]3.8e-6686.34Show/hide
Query:  MSTSESKLQDAESN-AAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKE
        MSTSESKLQDAESN AAA AKT EDQQQ G+P HSEEKS ++S QSGK+ E+GGEDEGGEDL+EEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKE
Subjt:  MSTSESKLQDAESN-AAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKE

Query:  DIVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLD
        DIVEKCFEVTGALKKCMEAHADYYEPILKAEK+AE EAIIELEKE TPNATQQ+T+SKDL+
Subjt:  DIVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLD

XP_023536143.1 uncharacterized protein LOC111797387 [Cucurbita pepo subsp. pepo]1.0e-6686.25Show/hide
Query:  MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKED
        MSTSESKLQDAESNAAA  KT EDQQQ G+P HSEEKS E+SGQSGK+  +GGEDEGGEDL+EEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKED
Subjt:  MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKED

Query:  IVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLD
        IVEKCFEVTGALKKCMEAHADYYEPILKAEK+AE EAIIELEKE TPNATQQ+T+S DL+
Subjt:  IVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLD

XP_038893081.1 uncharacterized protein LOC120081968 [Benincasa hispida]2.9e-6687.5Show/hide
Query:  MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKED
        MSTSESKLQDAES AAAT KTLEDQ QSGS   SEEK SE+S QSG++PE+GG DE GEDLEEEEEGECGFCLFMKGGGC+DSF+ WEKCIEEAEKNKED
Subjt:  MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKED

Query:  IVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLD
        IVEKCFEVTGALKKCMEAHADYYEPILKAEK+AEEEAIIELEKEITPNATQQN+NSKDL+
Subjt:  IVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLD

TrEMBL top hitse value%identityAlignment
A0A0A0KU46 GCK domain-containing protein4.3e-6383.23Show/hide
Query:  MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKED
        MSTSESKLQDAESNAAAT KTLEDQ QS +P +SEEKSSE++  SGK+ E+GG DEGGED+EEEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKED
Subjt:  MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKED

Query:  IVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLDA
        IVEKCFEVTGALKKCMEAH DYYEPILKAEK+AEEEAIIELEKE TP+A+QQ+TNS +  A
Subjt:  IVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLDA

A0A1S3BFM8 transcription elongation factor spt5-like2.0e-6080Show/hide
Query:  MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDL----EEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEK
        MSTSESKLQDAESNAAA +KTLEDQ QS S  HS+EKSSE++  SGK+ E+GG DEGGED+    EEEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEK
Subjt:  MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDL----EEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEK

Query:  NKEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLDA
        NKEDIVEKCFEVTGALKKCMEAH DYYEPILKAEK+AEEEAIIELEKEI P+A+Q++TNS +  A
Subjt:  NKEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLDA

A0A5A7SVC8 Transcription elongation factor spt5-like2.0e-6080Show/hide
Query:  MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDL----EEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEK
        MSTSESKLQDAESNAAA +KTLEDQ QS S  HS+EKSSE++  SGK+ E+GG DEGGED+    EEEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEK
Subjt:  MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDL----EEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEK

Query:  NKEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLDA
        NKEDIVEKCFEVTGALKKCMEAH DYYEPILKAEK+AEEEAIIELEKEI P+A+Q++TNS +  A
Subjt:  NKEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLDA

A0A6J1GZI9 transcription elongation factor spt52.1e-6286.27Show/hide
Query:  MSTSESKLQDAESN---AAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKN
        MSTSESKLQDAESN   AAA AKT EDQQQ G+P HSEEKS E+SGQSGK+ E+GGEDEGGEDL+EEEE ECGFCLFMKGGGCRDSF+ WEKCIEEAEKN
Subjt:  MSTSESKLQDAESN---AAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNAT
        KEDIVEKCFE+TGALKKCMEAHADYYEPILKAEK+AE EAIIELEKE TPNAT
Subjt:  KEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNAT

A0A6J1K434 uncharacterized protein LOC1114921081.8e-6686.34Show/hide
Query:  MSTSESKLQDAESN-AAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKE
        MSTSESKLQDAESN AAA AKT EDQQQ G+P HSEEKS ++S QSGK+ E+GGEDEGGEDL+EEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKE
Subjt:  MSTSESKLQDAESN-AAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKE

Query:  DIVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLD
        DIVEKCFEVTGALKKCMEAHADYYEPILKAEK+AE EAIIELEKE TPNATQQ+T+SKDL+
Subjt:  DIVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14048.1 GCK domain-containing protein3.6e-0636.17Show/hide
Query:  GEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKEDIVEKCFEVTGALKKCME-AHADYYEPILKAEKLAEEEAIIELEKEI
        GE     ++ EEEE    F  FM+GGGC++ F +WE C +EA             V   + KCM     D+Y P L A+K A+E     +EKE+
Subjt:  GEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKEDIVEKCFEVTGALKKCME-AHADYYEPILKAEKLAEEEAIIELEKEI

AT1G14060.1 GCK domain-containing protein6.1e-3054.11Show/hide
Query:  SESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDE-----GGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNK
        S+ K Q+ E    A ++ L D   S +P  SEE     S    + PE+   DE     GG D + EEEGECGFCLFMKGGGC+DSF+ WE+C+E AEKNK
Subjt:  SESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDE-----GGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNK

Query:  EDIVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKE
        EDIV  C EVT  LKKCM+ H+DYY+PIL AEK AE E   ELE E
Subjt:  EDIVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKE

AT5G02210.1 GCK domain-containing protein1.4e-1348.35Show/hide
Query:  EDLEEEEEGECGFCLFMKGGGCRDSFMNW-EKC---IEEAEKNKEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEI
        +++ EEE+ +  F  FMKGGGC++SF  W + C    EEAEKNK D+V KC  + G   KCM+ H+DYY PIL  +K  EE     LEKE+
Subjt:  EDLEEEEEGECGFCLFMKGGGCRDSFMNW-EKC---IEEAEKNKEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEI

AT5G57570.1 GCK domain-containing protein6.4e-1140.71Show/hide
Query:  SGSPIHSEEKSSEKSGQSGKVPENGGE-----DEGGEDL-EEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKN-KEDIVEKCFEVTGALKKCMEAHA
        S S  +S+E  S   GQ  +  +         +E GE   EEEE GEC  C F+KGG C++SF+  E+C++EAE++ +E    KC EV    K CM  + 
Subjt:  SGSPIHSEEKSSEKSGQSGKVPENGGE-----DEGGEDL-EEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKN-KEDIVEKCFEVTGALKKCMEAHA

Query:  DYYEPILKAEKLA
         YYEPIL  E  A
Subjt:  DYYEPILKAEKLA

AT5G57640.1 GCK domain-containing protein2.6e-1240.15Show/hide
Query:  LEDQQQ-SGSPIHSEEKSSEKSGQSGKVPENGGEDEG---GEDLE--EEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKEDIVEKCFEVTGALKKC
        +EDQ+    S   SE++   K  ++  + + G E+E     EDL+  EEE GEC  C F+KGG C+++F   E C +EA+KN ED V KC E     K C
Subjt:  LEDQQQ-SGSPIHSEEKSSEKSGQSGKVPENGGEDEG---GEDLE--EEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKEDIVEKCFEVTGALKKC

Query:  MEAHADYYEPILKAEKLAEEEAIIEL---EKE
        M  +  YYEP+L  E  A  + + EL   EKE
Subjt:  MEAHADYYEPILKAEKLAEEEAIIEL---EKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACTTCGGAGTCGAAACTCCAAGACGCAGAATCAAACGCCGCAGCCACCGCTAAAACCCTGGAGGATCAACAACAATCGGGCTCCCCAATTCACTCTGAGGAAAA
ATCTTCCGAGAAATCAGGCCAATCAGGAAAGGTTCCCGAGAATGGAGGTGAAGATGAAGGAGGAGAGGATCTAGAAGAGGAAGAAGAGGGGGAGTGTGGATTTTGCTTGT
TTATGAAAGGGGGTGGTTGCAGAGATAGCTTCATGAATTGGGAGAAGTGCATCGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAGTGCTTTGAAGTGACGGGG
GCTCTGAAGAAGTGTATGGAGGCTCATGCGGATTATTACGAGCCGATTCTAAAGGCGGAGAAACTGGCAGAGGAGGAGGCGATTATCGAATTGGAGAAGGAAATAACTCC
GAATGCTACGCAACAAAATACAAACTCCAAAGACCTGGATGCTGGTGAGGTGAGAAATATTTCACATGTGAAAGGAGTCAGGAAGTTCGTTGTCTGTTTTCAGATTAAAA
CTGTTGGTGTGTCCTCACCCACTGGAGTGAATGATTCAAAGTTTTTGTCTAGAGGAATTAGGCTACATGGCATTAGACCAATGAACGTAAAAATTCTTCATTCTGGTACT
CTGGTAGTTACACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCACTTCGGAGTCGAAACTCCAAGACGCAGAATCAAACGCCGCAGCCACCGCTAAAACCCTGGAGGATCAACAACAATCGGGCTCCCCAATTCACTCTGAGGAAAA
ATCTTCCGAGAAATCAGGCCAATCAGGAAAGGTTCCCGAGAATGGAGGTGAAGATGAAGGAGGAGAGGATCTAGAAGAGGAAGAAGAGGGGGAGTGTGGATTTTGCTTGT
TTATGAAAGGGGGTGGTTGCAGAGATAGCTTCATGAATTGGGAGAAGTGCATCGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAGTGCTTTGAAGTGACGGGG
GCTCTGAAGAAGTGTATGGAGGCTCATGCGGATTATTACGAGCCGATTCTAAAGGCGGAGAAACTGGCAGAGGAGGAGGCGATTATCGAATTGGAGAAGGAAATAACTCC
GAATGCTACGCAACAAAATACAAACTCCAAAGACCTGGATGCTGGTGAGGTGAGAAATATTTCACATGTGAAAGGAGTCAGGAAGTTCGTTGTCTGTTTTCAGATTAAAA
CTGTTGGTGTGTCCTCACCCACTGGAGTGAATGATTCAAAGTTTTTGTCTAGAGGAATTAGGCTACATGGCATTAGACCAATGAACGTAAAAATTCTTCATTCTGGTACT
CTGGTAGTTACACCTTAG
Protein sequenceShow/hide protein sequence
MSTSESKLQDAESNAAATAKTLEDQQQSGSPIHSEEKSSEKSGQSGKVPENGGEDEGGEDLEEEEEGECGFCLFMKGGGCRDSFMNWEKCIEEAEKNKEDIVEKCFEVTG
ALKKCMEAHADYYEPILKAEKLAEEEAIIELEKEITPNATQQNTNSKDLDAGEVRNISHVKGVRKFVVCFQIKTVGVSSPTGVNDSKFLSRGIRLHGIRPMNVKILHSGT
LVVTP