; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026152 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026152
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibosome maturation factor RimP
Genome locationscaffold7:2899256..2901964
RNA-Seq ExpressionSpg026152
SyntenySpg026152
Gene Ontology termsGO:0042274 - ribosomal small subunit biogenesis (biological process)
InterPro domainsIPR003728 - Ribosome maturation factor RimP


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574039.1 Serine/threonine-protein kinase dst1, partial [Cucurbita argyrosperma subsp. sororia]9.8e-13978.3Show/hide
Query:  ELPSDNRRGKAMSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPL
        +LPS NRRGK MSGSRIA TLLHRARR A  SS SSAGRPSS VF  + R S+SSCSSSS HV FRREHAFAFSP  T+RLFNTN SKEF D+VKE NPL
Subjt:  ELPSDNRRGKAMSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPL

Query:  QCMDAFSYSDAIHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRG
        Q                             YGR DEG ETTDGWEEDDDLEPELGDG GGGGV LQGV WGE VL+LAHEVLLQ GDDI LYSFKTT RG
Subjt:  QCMDAFSYSDAIHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRG

Query:  YIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELES
        YIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDL RFK MP+RVCYIED ESRGTEN GVFM+DHV+LES
Subjt:  YIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELES

Query:  ESCVWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK
        ESCVWKLANV+ENRDPLSKGRPLTRKQK+WRLKLP+ NHKK
Subjt:  ESCVWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK

KAG7013097.1 rimP, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-13778.87Show/hide
Query:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA
        MSGSRIA TLLHRARR A  SS SSAGRPSS VF  + R S+SSCSSSS HV FRREHAFAFSP  T+RLFNTN SKEF D+VKE NPLQ          
Subjt:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA

Query:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSN
                           YGR DEG ETTDGWEEDDDLEPELGDG GGGGV LQGV WGE VL+LAHEVLLQ GDDI LYSFKTT RGYIYVRLDKLSN
Subjt:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSN

Query:  EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANVR
        EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDL RFK MP+RVCYIED ESRGTEN GVFM+DHV+LESESCVWKLANV+
Subjt:  EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANVR

Query:  ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLE
        ENRDPLSKGRPLTRKQK+WRLKLP+ NHKKVFLYLE
Subjt:  ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLE

XP_022944994.1 uncharacterized protein LOC111449365 [Cucurbita moschata]2.4e-13778.57Show/hide
Query:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA
        MSGSRIA TLLHRARR A  SS SSAGRPSS VF  + R S+SSCSSSS HV FRREHAFAFSP  T+RLFNTN SKEF D+VKE NPLQ          
Subjt:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA

Query:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSN
                           YGR DEG ETTDGWEEDDDLEPELGDG GGGGV LQGV WGE VL+LAHEVLLQ GDDI LYSFKTT RGYIYVRLDKLSN
Subjt:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSN

Query:  EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANVR
        EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDL RFK MP+RVCYIED ESRGTEN GVFM+DHV+LESESCVWKLANV+
Subjt:  EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANVR

Query:  ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLE
        ENRDPLSKGRPLTRKQK+WRLK+P+ NHKKVFLYLE
Subjt:  ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLE

XP_022967944.1 uncharacterized protein LOC111467332 isoform X1 [Cucurbita maxima]2.0e-13979.17Show/hide
Query:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA
        MSGSRIA TLLHRARRAA  SS SSAGRPSS VFC + R S+SSCSSSS HV FRREHAFAFSP  T+RLFNTN SKEF D++K QNPLQ          
Subjt:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA

Query:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSN
                             R DEG ETTDGWEEDDDLEPELGDG GGGGV LQGV WGE VL+LAHEVLLQLGDDIKLYSFKTT RGYIYVRLDKLSN
Subjt:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSN

Query:  EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANVR
        EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDL RFK MP+RVCYIED ESRGTEN GVFM+DHV+LESESCVWKLANV+
Subjt:  EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANVR

Query:  ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLE
        ENRDPLSKGRPLTRKQK+WRLKLP+ NHKKVFLYLE
Subjt:  ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLE

XP_023541150.1 uncharacterized protein LOC111801398 isoform X1 [Cucurbita pepo subsp. pepo]4.8e-13878.27Show/hide
Query:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA
        MSG+ IA TLLHR+RRAA   S SSAGRPSS VFC + R S+SSCSSSS HV FRREHAFAFSP  T+R FNTN+SKEF D+VKEQNPLQ          
Subjt:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA

Query:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSN
                           YGR DEG ETTDGWEEDDDLEPELGDG GGGGV LQGV WGE VL+LAHEVLLQ GDDIKLYSFKTT RGYIYVRLDKLSN
Subjt:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSN

Query:  EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANVR
        EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDL RFK MP++VCYIED ESRGTEN GVFM+DHV+LESESCVWKLANV+
Subjt:  EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANVR

Query:  ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLE
        ENRDPLSKGRPLTRKQK+WRLKLP+ NHKKVFLYLE
Subjt:  ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLE

TrEMBL top hitse value%identityAlignment
A0A0A0KW71 Uncharacterized protein4.0e-12271.89Show/hide
Query:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA
        M  ++IAHTLL R+  AAVSS +SS G PSSTVF  EP  S+++CSS S      R HAF FS    LRLFNTN+SK F D+VKEQNP Q          
Subjt:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA

Query:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEE-DDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLS
                           YGR+DE GETTDGWEE DDDLEPELGDG  GGGV LQGV WGEHVL LA EVLLQ GDDIKLYSFK TPRGYIYVRLDKLS
Subjt:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEE-DDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLS

Query:  NEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANV
        +E+GCP+LEEL+SYS+EYKKRLDETGALGNIPDDLALEVSSPGAERLLK+PDDL RFK  P+RV YIED++SRG+EN GVFMLDH+ELESESC+WKLANV
Subjt:  NEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANV

Query:  RENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLEC
        RENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYL+C
Subjt:  RENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLEC

A0A1S3BF38 uncharacterized protein LOC103489189 isoform X32.3e-12572.49Show/hide
Query:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA
        M G++IA TLL R+R  AVSS +SS G PSSTVF  E    +++CSS S      R+HAF FSP  TLRLF+T++SK+F D+VKEQNPLQ          
Subjt:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA

Query:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEE-DDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLS
                           YGR+DE GETTDGWEE DDDLEPELGDG  GGGV LQGV WGEHVL LA EVLLQ GDDIKLYSFK TPRGYIYVRLDKLS
Subjt:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEE-DDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLS

Query:  NEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANV
        +++GCPS+EEL+SYS+EYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFK  P+RV YIED++SRG+EN GVFMLDHVELESESC+WKLANV
Subjt:  NEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANV

Query:  RENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLEC
        RENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLEC
Subjt:  RENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLEC

A0A6J1D5R7 uncharacterized protein LOC1110175627.3e-13273.59Show/hide
Query:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA
        MSG+RIAHT LHRAR  A SSS+SS  RPSS  FC E R  RSSCSSSSRHV F R+HAFA SP A LRLF+TN++K F D+V+EQ PLQ          
Subjt:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA

Query:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSN
                               DEGGETTDGWE+DDD+EPE+GDG GGGGV LQGV WGEHVLSLAHEVLLQ GDDIKLYSFKTTPRGYIYVRLDKLSN
Subjt:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSN

Query:  EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANVR
        E+GCPSLE+LESY+QEYKKRL  TGALG IPDDLALEVSSPGAERLLKVPDDL RFK MP++V Y+ED+   GTEN GVF+LDHVE ES+SCVWKLANVR
Subjt:  EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANVR

Query:  ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLEC
        ENRDPLSKGRPLTRKQKEWRL+LPYANHKKVFLYLEC
Subjt:  ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLEC

A0A6J1FZQ6 uncharacterized protein LOC1114493651.2e-13778.57Show/hide
Query:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA
        MSGSRIA TLLHRARR A  SS SSAGRPSS VF  + R S+SSCSSSS HV FRREHAFAFSP  T+RLFNTN SKEF D+VKE NPLQ          
Subjt:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA

Query:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSN
                           YGR DEG ETTDGWEEDDDLEPELGDG GGGGV LQGV WGE VL+LAHEVLLQ GDDI LYSFKTT RGYIYVRLDKLSN
Subjt:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSN

Query:  EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANVR
        EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDL RFK MP+RVCYIED ESRGTEN GVFM+DHV+LESESCVWKLANV+
Subjt:  EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANVR

Query:  ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLE
        ENRDPLSKGRPLTRKQK+WRLK+P+ NHKKVFLYLE
Subjt:  ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLE

A0A6J1HY61 uncharacterized protein LOC111467332 isoform X19.5e-14079.17Show/hide
Query:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA
        MSGSRIA TLLHRARRAA  SS SSAGRPSS VFC + R S+SSCSSSS HV FRREHAFAFSP  T+RLFNTN SKEF D++K QNPLQ          
Subjt:  MSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPIATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDA

Query:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSN
                             R DEG ETTDGWEEDDDLEPELGDG GGGGV LQGV WGE VL+LAHEVLLQLGDDIKLYSFKTT RGYIYVRLDKLSN
Subjt:  IHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSN

Query:  EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANVR
        EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDL RFK MP+RVCYIED ESRGTEN GVFM+DHV+LESESCVWKLANV+
Subjt:  EYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTEN-GVFMLDHVELESESCVWKLANVR

Query:  ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLE
        ENRDPLSKGRPLTRKQK+WRLKLP+ NHKKVFLYLE
Subjt:  ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLE

SwissProt top hitse value%identityAlignment
B0SH16 Ribosome maturation factor RimP2.4e-0728.67Show/hide
Query:  VLLQLGDDIKLYSFKTTPR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYI
        +L  L   + L+S +   R     I + LD L+++ G  SLE+ E+ S+  K+ LD+ G       D  L+VSS GAER+L++P+DL RF+ + +++   
Subjt:  VLLQLGDDIKLYSFKTTPR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYI

Query:  EDMESRGTENGVFMLDHVELESESCVWKLANVRENRDPLSKGRPLTRKQK
          +ES   +  ++ L  V  +S          R  ++  S   P+   +K
Subjt:  EDMESRGTENGVFMLDHVELESESCVWKLANVRENRDPLSKGRPLTRKQK

Q04U33 Ribosome maturation factor RimP2.3e-1035.43Show/hide
Query:  LSLAHEVLLQLGDD-----IKLYSFKTTPR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLS
        ++++ E +  + DD     +KLYS K   R     I V LD L + YG  SL E E  S++ K+ L+        PD D  L+VSS GAER L +P+D+ 
Subjt:  LSLAHEVLLQLGDD-----IKLYSFKTTPR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLS

Query:  RFKTMPLRVCYIEDMESRGTENGVFML
        RF+ +P+R+ +    ES   + G+F +
Subjt:  RFKTMPLRVCYIEDMESRGTENGVFML

Q04ZJ3 Ribosome maturation factor RimP2.3e-1035.43Show/hide
Query:  LSLAHEVLLQLGDD-----IKLYSFKTTPR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLS
        ++++ E +  + DD     +KLYS K   R     I V LD L + YG  SL E E  S++ K+ L+        PD D  L+VSS GAER L +P+D+ 
Subjt:  LSLAHEVLLQLGDD-----IKLYSFKTTPR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLS

Query:  RFKTMPLRVCYIEDMESRGTENGVFML
        RF+ +P+R+ +    ES   + G+F +
Subjt:  RFKTMPLRVCYIEDMESRGTENGVFML

Q72NX1 Ribosome maturation factor RimP5.2e-1040.57Show/hide
Query:  IKLYSFKTTPR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRG
        +KLYS K   R     I V LD L + YG  SL E E  S++ K+ L+        PD D  L+VSS GAER L +P DL RF+ +P+R+ +  + ES  
Subjt:  IKLYSFKTTPR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRG

Query:  TENGVF
         + G+F
Subjt:  TENGVF

Q8F7K3 Ribosome maturation factor RimP5.2e-1040.57Show/hide
Query:  IKLYSFKTTPR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRG
        +KLYS K   R     I V LD L + YG  SL E E  S++ K+ L+        PD D  L+VSS GAER L +P DL RF+ +P+R+ +  + ES  
Subjt:  IKLYSFKTTPR---GYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRG

Query:  TENGVF
         + G+F
Subjt:  TENGVF

Arabidopsis top hitse value%identityAlignment
AT1G69210.1 Uncharacterised protein family UPF00901.8e-7463.03Show/hide
Query:  ETTDGWE--EDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETG
        E  + WE  ED+D+E +LGDG  GGG+ L+GVAWGE VLS+A +VL Q   D++L++FKT+PRGYIYVRLDKLS EYGCP+++ELE +S+E+KKRLD+ G
Subjt:  ETTDGWE--EDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETG

Query:  ALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESR-GTENGVFMLDHVELESESCVWKLANVRENRDPLSKGRPLTRKQKEWRLKLPY
        A   IP+DLALEVSSPGAERLL+VP+DL RFK MP+ V Y+E+  SR   ++GVF+L+ ++ ES++CVWKLA+VRENRDP SKGRPL+RKQK+ R+ LP+
Subjt:  ALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESR-GTENGVFMLDHVELESESCVWKLANVRENRDPLSKGRPLTRKQKEWRLKLPY

Query:  ANHKKVFLYLE
        A+HKK+ LYL+
Subjt:  ANHKKVFLYLE

AT1G69210.2 Uncharacterised protein family UPF00901.7e-3562.83Show/hide
Query:  ETTDGWE--EDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETG
        E  + WE  ED+D+E +LGDG  GGG+ L+GVAWGE VLS+A +VL Q   D++L++FKT+PRGYIYVRLDKLS EYGCP+++ELE +S+E+KKRLD+ G
Subjt:  ETTDGWE--EDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETG

Query:  ALGNIPDDLALEV
        A   IP+DLALEV
Subjt:  ALGNIPDDLALEV

AT1G77122.1 Uncharacterised protein family UPF00901.4e-4542.4Show/hide
Query:  DDEGGETTDGWEEDDDLEPEL--GDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKR
        DDE  E  D   E D+ E EL  GDG GGGG+ L G  W +  L+LA +V      D+ +Y+FKT P   I VR+++L+N++G P++E++E++S  Y+ +
Subjt:  DDEGGETTDGWEEDDDLEPEL--GDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLGDDIKLYSFKTTPRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKR

Query:  LDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYI-EDMESRGTENGVFMLDHVELESESCVWKLANVRENRDPLSKGRPLTRKQKEWR
        L E     +IPD+++LEVSSPG ER++++P DL R+K  P+ V Y  ED E+ G  +G+F L   ++E++ C+W +A++R NR+   KGRPL++KQ+EWR
Subjt:  LDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYI-EDMESRGTENGVFMLDHVELESESCVWKLANVRENRDPLSKGRPLTRKQKEWR

Query:  LKLPYANHKKVFLYLEC
        L+  + + + V L+ EC
Subjt:  LKLPYANHKKVFLYLEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTTTAGAGGGTTTAGAGGAATCCTGTGCAACCGCGAAAGCCCGCGAAAGCCGAGCCCTTTGTACTTGTACATGTACTTCGAAGTCTCCATTCCGATTCTGCGAGCTTCC
ATCGGACAACCGGCGAGGCAAAGCTATGAGCGGCAGCAGGATTGCTCATACTTTGCTCCATCGAGCTCGAAGGGCCGCCGTTTCCTCTTCAGTTTCCTCCGCCGGCAGAC
CGTCTTCTACAGTCTTTTGCCCTGAACCAAGGTATTCTCGCAGTTCTTGCTCCTCTTCCTCCCGTCATGTTCGTTTCCGTCGCGAGCACGCATTCGCCTTTTCTCCCATT
GCAACCCTGCGGTTATTCAATACCAATACCTCTAAAGAATTTGGAGATAAAGTGAAAGAACAGAATCCACTCCAATGTATGGATGCATTTTCTTATTCCGATGCAATTCA
TGGTGTTTGCTGTTTAGTGGAGTGTCTGACTATGGATGCTGTAATTCAGTCTTATGGGAGAGATGATGAAGGGGGAGAAACCACGGATGGATGGGAAGAAGATGATGATC
TCGAGCCTGAGCTTGGTGATGGAGCGGGTGGTGGTGGTGTTAATTTGCAAGGCGTGGCATGGGGTGAACATGTTCTTTCTCTTGCTCATGAGGTCCTGCTGCAACTTGGC
GATGACATAAAACTCTACTCTTTTAAGACTACTCCACGTGGATATATTTACGTCAGATTAGACAAGCTCTCAAACGAATATGGATGTCCCAGCTTGGAGGAACTTGAAAG
TTATAGTCAAGAGTACAAGAAAAGATTAGATGAAACTGGGGCACTTGGAAATATTCCTGACGATTTAGCTCTTGAGGTATCATCTCCAGGTGCAGAGAGATTACTCAAGG
TCCCAGATGATCTGTCTAGATTTAAAACCATGCCATTGCGAGTGTGCTACATAGAAGACATGGAATCGAGAGGCACTGAAAATGGAGTTTTTATGTTGGATCATGTGGAA
TTGGAATCTGAGAGCTGTGTCTGGAAATTGGCAAATGTAAGGGAAAATCGAGATCCTTTAAGTAAGGGTAGGCCTTTGACTCGTAAGCAGAAAGAATGGAGGTTAAAGTT
ACCCTATGCAAATCATAAGAAGGTATTCCTTTACCTTGAATGCTGA
mRNA sequenceShow/hide mRNA sequence
GGTTTAGAGGGTTTAGAGGAATCCTGTGCAACCGCGAAAGCCCGCGAAAGCCGAGCCCTTTGTACTTGTACATGTACTTCGAAGTCTCCATTCCGATTCTGCGAGCTTCC
ATCGGACAACCGGCGAGGCAAAGCTATGAGCGGCAGCAGGATTGCTCATACTTTGCTCCATCGAGCTCGAAGGGCCGCCGTTTCCTCTTCAGTTTCCTCCGCCGGCAGAC
CGTCTTCTACAGTCTTTTGCCCTGAACCAAGGTATTCTCGCAGTTCTTGCTCCTCTTCCTCCCGTCATGTTCGTTTCCGTCGCGAGCACGCATTCGCCTTTTCTCCCATT
GCAACCCTGCGGTTATTCAATACCAATACCTCTAAAGAATTTGGAGATAAAGTGAAAGAACAGAATCCACTCCAATGTATGGATGCATTTTCTTATTCCGATGCAATTCA
TGGTGTTTGCTGTTTAGTGGAGTGTCTGACTATGGATGCTGTAATTCAGTCTTATGGGAGAGATGATGAAGGGGGAGAAACCACGGATGGATGGGAAGAAGATGATGATC
TCGAGCCTGAGCTTGGTGATGGAGCGGGTGGTGGTGGTGTTAATTTGCAAGGCGTGGCATGGGGTGAACATGTTCTTTCTCTTGCTCATGAGGTCCTGCTGCAACTTGGC
GATGACATAAAACTCTACTCTTTTAAGACTACTCCACGTGGATATATTTACGTCAGATTAGACAAGCTCTCAAACGAATATGGATGTCCCAGCTTGGAGGAACTTGAAAG
TTATAGTCAAGAGTACAAGAAAAGATTAGATGAAACTGGGGCACTTGGAAATATTCCTGACGATTTAGCTCTTGAGGTATCATCTCCAGGTGCAGAGAGATTACTCAAGG
TCCCAGATGATCTGTCTAGATTTAAAACCATGCCATTGCGAGTGTGCTACATAGAAGACATGGAATCGAGAGGCACTGAAAATGGAGTTTTTATGTTGGATCATGTGGAA
TTGGAATCTGAGAGCTGTGTCTGGAAATTGGCAAATGTAAGGGAAAATCGAGATCCTTTAAGTAAGGGTAGGCCTTTGACTCGTAAGCAGAAAGAATGGAGGTTAAAGTT
ACCCTATGCAAATCATAAGAAGGTATTCCTTTACCTTGAATGCTGA
Protein sequenceShow/hide protein sequence
GLEGLEESCATAKARESRALCTCTCTSKSPFRFCELPSDNRRGKAMSGSRIAHTLLHRARRAAVSSSVSSAGRPSSTVFCPEPRYSRSSCSSSSRHVRFRREHAFAFSPI
ATLRLFNTNTSKEFGDKVKEQNPLQCMDAFSYSDAIHGVCCLVECLTMDAVIQSYGRDDEGGETTDGWEEDDDLEPELGDGAGGGGVNLQGVAWGEHVLSLAHEVLLQLG
DDIKLYSFKTTPRGYIYVRLDKLSNEYGCPSLEELESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKTMPLRVCYIEDMESRGTENGVFMLDHVE
LESESCVWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLEC