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Spg026153 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026153
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L11
Genome locationscaffold7:1043171..1047769
RNA-Seq ExpressionSpg026153
SyntenySpg026153
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002132 - Ribosomal protein L5
IPR022803 - Ribosomal protein L5 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KVH96796.1 Ribosomal protein L5, partial [Cynara cardunculus var. scolymus]1.2e-0958.75Show/hide
Query:  SLPQAHGSRFLRPSLELSSNTVAVAAAYQNSPMASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        SLP +H S    P L  ++   A AAA   + MAS++K SNPMR+ KVQKL+LNISV ES +RLT+AAKVLEQL GQS V
Subjt:  SLPQAHGSRFLRPSLELSSNTVAVAAAYQNSPMASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV

TVU01284.1 hypothetical protein EJB05_53247, partial [Eragrostis curvula]5.4e-1074.19Show/hide
Query:  SNTVAVAAAYQNSPMASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        S  VAVAAA  +S MAS+KK SNPMRD KVQKL+LNISV ES +RLT+AAKVLEQL GQS V
Subjt:  SNTVAVAAAYQNSPMASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV

TVU07822.1 hypothetical protein EJB05_41192, partial [Eragrostis curvula]5.4e-1074.19Show/hide
Query:  SNTVAVAAAYQNSPMASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        S  VAVAAA  +S MAS+KK SNPMRD KVQKL+LNISV ES +RLT+AAKVLEQL GQS V
Subjt:  SNTVAVAAAYQNSPMASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV

XP_028783754.1 MAP3K epsilon protein kinase 1-like [Prosopis alba]7.0e-1036.96Show/hide
Query:  GQVGPADVEFSLPQAHGSRFLRPSLELSSNTVAVAAAYQNSPMASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQ--------SHVVF
        G     D+   L +  G      S   S++ V  A A  N+P   K + +  +RDT  +K     S I  AN       +L+ ++G           ++F
Subjt:  GQVGPADVEFSLPQAHGSRFLRPSLELSSNTVAVAAAYQNSPMASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQ--------SHVVF

Query:  HEKLPGENLYPLQAVEFGRLVGSLRLDEPKDAIVYACQ
         EKLPGENL+PLQAVEF +LVGSLR +EP++ IV ACQ
Subjt:  HEKLPGENLYPLQAVEFGRLVGSLRLDEPKDAIVYACQ

XP_038903582.1 MAP3K epsilon protein kinase 1-like [Benincasa hispida]7.7e-0980.49Show/hide
Query:  VVFHEKLPGENLYPLQAVEFGRLVGSLRLDEPKDAIVYACQ
        +VF EKLPGE L+PLQAVEFGRLVGSLR DEP+D IV ACQ
Subjt:  VVFHEKLPGENLYPLQAVEFGRLVGSLRLDEPKDAIVYACQ

TrEMBL top hitse value%identityAlignment
A0A0A0LC86 Protein kinase domain-containing protein3.7e-0980.49Show/hide
Query:  VVFHEKLPGENLYPLQAVEFGRLVGSLRLDEPKDAIVYACQ
        +VF EKLPGE L+PLQAVEFGRLVGSLR DEP+D IV ACQ
Subjt:  VVFHEKLPGENLYPLQAVEFGRLVGSLRLDEPKDAIVYACQ

A0A103XTY7 Ribosomal protein L5 (Fragment)5.8e-1058.75Show/hide
Query:  SLPQAHGSRFLRPSLELSSNTVAVAAAYQNSPMASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        SLP +H S    P L  ++   A AAA   + MAS++K SNPMR+ KVQKL+LNISV ES +RLT+AAKVLEQL GQS V
Subjt:  SLPQAHGSRFLRPSLELSSNTVAVAAAYQNSPMASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV

A0A4D8YFH5 Large subunit ribosomal protein L11e3.7e-0970.91Show/hide
Query:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHVVFHEKLP
        MAS+KK SNPMR+ KVQKL+LNISV ES +RLT+AAKVLEQL GQS V    K P
Subjt:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHVVFHEKLP

A0A5J9SQN9 Uncharacterized protein (Fragment)2.6e-1074.19Show/hide
Query:  SNTVAVAAAYQNSPMASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        S  VAVAAA  +S MAS+KK SNPMRD KVQKL+LNISV ES +RLT+AAKVLEQL GQS V
Subjt:  SNTVAVAAAYQNSPMASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV

A0A5J9T924 Uncharacterized protein (Fragment)2.6e-1074.19Show/hide
Query:  SNTVAVAAAYQNSPMASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        S  VAVAAA  +S MAS+KK SNPMRD KVQKL+LNISV ES +RLT+AAKVLEQL GQS V
Subjt:  SNTVAVAAAYQNSPMASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV

SwissProt top hitse value%identityAlignment
A2YDY2 60S ribosomal protein L113.3e-1075Show/hide
Query:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        MAS+KK SNPMR+ KVQKL+LNISV ES +RLT+A+KVLEQL GQS V
Subjt:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV

P42794 60S ribosomal protein L11-21.1e-1075Show/hide
Query:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        MAS+KK SNPMRD KVQKL+LNISV ES +RLT+A+KVLEQL GQ+ V
Subjt:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV

P42795 60S ribosomal protein L11-11.1e-1075Show/hide
Query:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        MAS+KK SNPMRD KVQKL+LNISV ES +RLT+A+KVLEQL GQ+ V
Subjt:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV

P46287 60S ribosomal protein L111.5e-1075Show/hide
Query:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        MAS+KK SNPMR+ KVQKL+LNISV ES +RLT+AAKVLEQL GQ+ V
Subjt:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV

Q0DK10 60S ribosomal protein L113.3e-1075Show/hide
Query:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        MAS+KK SNPMR+ KVQKL+LNISV ES +RLT+A+KVLEQL GQS V
Subjt:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV

Arabidopsis top hitse value%identityAlignment
AT2G42740.1 ribosomal protein large subunit 16A8.0e-1275Show/hide
Query:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        MAS+KK SNPMRD KVQKL+LNISV ES +RLT+A+KVLEQL GQ+ V
Subjt:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV

AT3G13530.1 mitogen-activated protein kinase kinase kinase 72.0e-1061.22Show/hide
Query:  EQLIGQSHVVFHEKLPGENLYPLQAVEFGRLVGSLRLDEPKDAIVYACQ
        + +I    +VF EK+P ENL+PLQAVEF RLV SLR DE +DAIV +CQ
Subjt:  EQLIGQSHVVFHEKLPGENLYPLQAVEFGRLVGSLRLDEPKDAIVYACQ

AT3G58700.1 Ribosomal L5P family protein8.0e-1275Show/hide
Query:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        MAS+KK SNPMRD KVQKL+LNISV ES +RLT+A+KVLEQL GQ+ V
Subjt:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV

AT4G18730.1 ribosomal protein L16B8.0e-1275Show/hide
Query:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        MAS+KK SNPMRD KVQKL+LNISV ES +RLT+A+KVLEQL GQ+ V
Subjt:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV

AT5G45775.2 Ribosomal L5P family protein8.0e-1275Show/hide
Query:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV
        MAS+KK SNPMRD KVQKL+LNISV ES +RLT+A+KVLEQL GQ+ V
Subjt:  MASKKKFSNPMRDTKVQKLILNISVIESANRLTKAAKVLEQLIGQSHV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCATTGATTTCGGAGGCGTTTCGGGACGAACCAGGCGAAACCGGGGCGGCGAGAGGCATCAGGGACCGAGAGGAGGTGACCGAGCTCGGCCCGCGCAAGCAGGC
CGAATGGTCGGCCTCGGCCTTGGGCCGAGGCTGGCCATATGGGTCGGGCCAAGTTGGCCCGGCTGATGTGGAATTTTCCTTACCGCAAGCGCACGGGTCAAGATTTCTTC
GCCCCTCCCTCGAATTGAGCAGCAACACAGTAGCCGTCGCAGCCGCCTACCAGAACTCTCCAATGGCTTCGAAGAAGAAGTTTTCGAACCCCATGAGGGATACTAAGGTG
CAGAAACTCATTCTCAATATCTCAGTCATTGAGAGCGCAAATCGACTTACCAAAGCTGCTAAGGTGCTCGAGCAACTGATCGGCCAGAGCCATGTGGTTTTTCATGAGAA
GTTGCCTGGAGAAAACCTTTATCCTTTGCAGGCTGTTGAATTTGGCAGATTAGTTGGTTCATTAAGACTTGATGAACCCAAAGATGCAATTGTATATGCCTGTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGCATTGATTTCGGAGGCGTTTCGGGACGAACCAGGCGAAACCGGGGCGGCGAGAGGCATCAGGGACCGAGAGGAGGTGACCGAGCTCGGCCCGCGCAAGCAGGC
CGAATGGTCGGCCTCGGCCTTGGGCCGAGGCTGGCCATATGGGTCGGGCCAAGTTGGCCCGGCTGATGTGGAATTTTCCTTACCGCAAGCGCACGGGTCAAGATTTCTTC
GCCCCTCCCTCGAATTGAGCAGCAACACAGTAGCCGTCGCAGCCGCCTACCAGAACTCTCCAATGGCTTCGAAGAAGAAGTTTTCGAACCCCATGAGGGATACTAAGGTG
CAGAAACTCATTCTCAATATCTCAGTCATTGAGAGCGCAAATCGACTTACCAAAGCTGCTAAGGTGCTCGAGCAACTGATCGGCCAGAGCCATGTGGTTTTTCATGAGAA
GTTGCCTGGAGAAAACCTTTATCCTTTGCAGGCTGTTGAATTTGGCAGATTAGTTGGTTCATTAAGACTTGATGAACCCAAAGATGCAATTGTATATGCCTGTCAATAA
Protein sequenceShow/hide protein sequence
MIALISEAFRDEPGETGAARGIRDREEVTELGPRKQAEWSASALGRGWPYGSGQVGPADVEFSLPQAHGSRFLRPSLELSSNTVAVAAAYQNSPMASKKKFSNPMRDTKV
QKLILNISVIESANRLTKAAKVLEQLIGQSHVVFHEKLPGENLYPLQAVEFGRLVGSLRLDEPKDAIVYACQ