CuGenDBv2

Gene ID	Spg026154
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Eukaryotic translation initiation factor 5A
Genome location	scaffold7:2691353..2692683
RNA-Seq Expression	Spg026154
Synteny	Spg026154
Gene Ontology terms	GO:0006413 - translational initiation (biological process) GO:0045901 - positive regulation of translational elongation (biological process) GO:0045905 - positive regulation of translational termination (biological process) GO:0003743 - translation initiation factor activity (molecular function) GO:0003746 - translation elongation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function)
InterPro domains	IPR001884 - Translation elongation factor IF5A-like IPR008991 - Translation protein SH3-like domain superfamily IPR012340 - Nucleic acid-binding, OB-fold IPR014722 - Ribosomal protein L2, domain 2 IPR019769 - Translation elongation factor, IF5A, hypusine site IPR020189 - Translation elongation factor, IF5A C-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KJB38699.1 hypothetical protein B456_006G267400 [Gossypium raimondii]

8.7e-64

93.85

Show/hide

Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQTALL
        F+SLLTDSG TKDDLRLPTDE+LL Q   L
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQTALL

RYQ81781.1 hypothetical protein Ahy_B10g100383 isoform C [Arachis hypogaea]

6.7e-64

93.08

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQTALL
        F+SLLT++G+TKDDLRLPTD+SLL+Q  LL
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQTALL

XP_008446407.1 PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo]

1.3e-64

98.41

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQ
        FISLLTDSGSTKDDLRLPTD++LLSQ
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQ

XP_022151244.1 eukaryotic translation initiation factor 5A-4-like [Momordica charantia]

7.9e-65

99.21

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFT KKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQ
        FISLLTDSGSTKDDLRLPTDESLLSQ
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQ

XP_038893432.1 eukaryotic translation initiation factor 5A-4 [Benincasa hispida]

6.0e-65

99.21

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQ
        FISLLTDSG+TKDDLRLPTDESLLSQ
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQ

TrEMBL top hits

e value

%identity

Alignment

A0A0D2S2X7 Eukaryotic translation initiation factor 5A

4.2e-64

93.85

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQTALL
        F+SLLTDSG TKDDLRLPTDE+LL Q   L
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQTALL

A0A1S3BFT8 Eukaryotic translation initiation factor 5A

6.5e-65

98.41

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQ
        FISLLTDSGSTKDDLRLPTD++LLSQ
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQ

A0A444WWI8 Eukaryotic translation initiation factor 5A

3.2e-64

93.08

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQTALL
        F+SLLT++G+TKDDLRLPTD+SLL+Q  LL
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQTALL

A0A5D3D1G5 Eukaryotic translation initiation factor 5A

6.5e-65

98.41

Show/hide

Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQ
        FISLLTDSGSTKDDLRLPTD++LLSQ
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQ

A0A6J1DCF3 Eukaryotic translation initiation factor 5A

3.8e-65

99.21

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFT KKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQ
        FISLLTDSGSTKDDLRLPTDESLLSQ
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQ

SwissProt top hits

e value

%identity

Alignment

P56335 Eukaryotic translation initiation factor 5A-3

1.1e-64

93.65

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF  KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQ
        F+SLLT+SG+TKDDLRLPTDESLL Q
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQ

P56336 Eukaryotic translation initiation factor 5A-4

5.3e-64

92.86

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEH FESKADAGASKTYPQQAGTIRK+GYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIFT KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQ
        F+SLLTD+G+TKDDLRLPTD+SLLSQ
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQ

Q9AXQ3 Eukaryotic translation initiation factor 5A-4

3.1e-64

92.06

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF AKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQ
        F+SLLT++G+TKDDLRLPTD++LL+Q
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQ

Q9AXQ4 Eukaryotic translation initiation factor 5A-3

5.3e-64

93.6

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEH FESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIFT KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLS
        F+SLLTD+G+TKDDLRLPTDE+LLS
Subjt:  FISLLTDSGSTKDDLRLPTDESLLS

Q9AXQ5 Eukaryotic translation initiation factor 5A-2

6.9e-64

92.06

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF  KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQ
        F+SLLT+SG+TKDDLRLPTDE+LL Q
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G13950.1 eukaryotic elongation factor 5A-1

3.9e-62

88.89

Show/hide

Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSDEEHHFES +DAGASKTYPQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFT+KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQ
        ++SLLTD+GSTKDDL+LP D++LL Q
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQ

AT1G26630.1 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein

5.8e-58

81.4

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFTAKKLEDIVPSSHNCDVPHV+R DYQLIDI+EDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQTAL
        F+SLLTDSG TKDDL+LPTD+ L +Q  L
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQTAL

AT1G26630.2 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein

7.6e-58

80.15

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFTAKKLEDIVPSSHNCDVPHV+R DYQLIDI+EDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQTALLV
        F+SLLTDSG TKDDL+LPTD+ L +Q    V
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQTALLV

AT1G69410.1 eukaryotic elongation factor 5A-3

1.9e-61

88.1

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Query:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG
        MSD+EHHFES +DAGASKTYPQQAG IRK G+IVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIFT+KKLEDIVPSSHNCDVPHV+R DYQLIDISEDG
Subjt:  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDG

Query:  FISLLTDSGSTKDDLRLPTDESLLSQ
        F+SLLTD+GSTKDDL+LPTDE+LL+Q
Subjt:  FISLLTDSGSTKDDLRLPTDESLLSQ

Sequences

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CDS sequence

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ATGTCGGACGAGGAGCACCACTTCGAGTCGAAGGCCGACGCCGGAGCTTCCAAGACTTATCCTCAGCAGGCTGGAACCATCCGTAAGAATGGTTACATTGTCATCAAGGG
CAGGCCTTGCAAGGTTGTTGAGGTTTCAACCTCAAAGACTGGGAAGCATGGACATGCTAAATGTCACTTTGTTGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATA
TCGTCCCCTCTTCACACAACTGTGATGTTCCCCATGTCAGCCGCACTGATTACCAGCTCATTGATATCTCTGAGGATGGATTTATTAGCCTGCTGACGGACAGTGGAAGC
ACCAAGGATGACCTGAGACTTCCAACTGATGAGAGTTTGCTGTCCCAGACCGCATTGCTTGTTCCAACGAAAGGATTTCTTCCTCCACTCAGTAAAGTACATTAG

mRNA sequence

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Protein sequence

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MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGS
TKDDLRLPTDESLLSQTALLVPTKGFLPPLSKVH

Spg026154 (gene) of Sponge gourd (cylindrica) v1 genome