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Spg026199 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026199
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionrubisco accumulation factor 1.1, chloroplastic-like
Genome locationscaffold7:2732968..2733258
RNA-Seq ExpressionSpg026199
SyntenySpg026199
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588314.1 Rubisco accumulation factor 1.2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.6e-0575Show/hide
Query:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEEDI
        N  EA+TAALEDALKV VTE A+SLIVRDLE EGEGK+  EE+I
Subjt:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEEDI
XP_008462710.1 PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis melo]8.8e-0465.12Show/hide
Query:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEED
        N  E +TAALE+ALKVVVTE A++LIV DLE +G+GK+G+EE+
Subjt:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEED
XP_022933155.1 rubisco accumulation factor 1.1, chloroplastic-like [Cucurbita moschata]5.5e-0675Show/hide
Query:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEEDI
        N  EA+TAALEDALKV VTE A+SLIVRDLE EGEGK+ +EE+I
Subjt:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEEDI
XP_022965491.1 rubisco accumulation factor 1.1, chloroplastic-like [Cucurbita maxima]9.4e-0675Show/hide
Query:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEEDI
        N  EA+TAAL DALKV VTE A+SLIVRDLE EGEGK+G EE+I
Subjt:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEEDI
XP_038880540.1 rubisco accumulation factor 1.1, chloroplastic-like [Benincasa hispida]2.1e-0570.45Show/hide
Query:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEEDI
        N  E +TAALE+ALKVVVTE A+ LIV DLEG+G+GKEG+EE+I
Subjt:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEEDI
TrEMBL top hitse value%identityAlignment
A0A1S3CHL8 rubisco accumulation factor 1, chloroplastic4.3e-0465.12Show/hide
Query:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEED
        N  E +TAALE+ALKVVVTE A++LIV DLE +G+GK+G+EE+
Subjt:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEED
A0A5D3DZE4 Rubisco accumulation factor 14.3e-0465.12Show/hide
Query:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEED
        N  E +TAALE+ALKVVVTE A++LIV DLE +G+GK+G+EE+
Subjt:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEED
A0A6J1F451 rubisco accumulation factor 1.1, chloroplastic-like2.7e-0675Show/hide
Query:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEEDI
        N  EA+TAALEDALKV VTE A+SLIVRDLE EGEGK+ +EE+I
Subjt:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEEDI
A0A6J1HLU0 rubisco accumulation factor 1.1, chloroplastic-like4.5e-0675Show/hide
Query:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEEDI
        N  EA+TAAL DALKV VTE A+SLIVRDLE EGEGK+G EE+I
Subjt:  NQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEEDI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAGCCAGAGGCGCAGACGGCGGCGTTGGAGGACGCGTTGAAAGTGGTGGTGACGGAGGGGGCGAAGAGTCTGATTGTTAGGGATTTGGAGGGGGAAGGAGAGGG
GAAAGAGGGCATAGAAGAGGACATTGTTAAAAAAAAACAGAAGAAAGAAAAGAAAGGAGAAGAAGAGAAGAAGAAGAAAGAAGAAAAAAAAATATTCCGGCGGCCGCCGC
CGTCGCCGGCAGCCGGCGGCGACCGGCCACCGGAGCTGAAGAAGAAGGTGATGGGGGAAGGAAGAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAGCCAGAGGCGCAGACGGCGGCGTTGGAGGACGCGTTGAAAGTGGTGGTGACGGAGGGGGCGAAGAGTCTGATTGTTAGGGATTTGGAGGGGGAAGGAGAGGG
GAAAGAGGGCATAGAAGAGGACATTGTTAAAAAAAAACAGAAGAAAGAAAAGAAAGGAGAAGAAGAGAAGAAGAAGAAAGAAGAAAAAAAAATATTCCGGCGGCCGCCGC
CGTCGCCGGCAGCCGGCGGCGACCGGCCACCGGAGCTGAAGAAGAAGGTGATGGGGGAAGGAAGAAGATAA
Protein sequenceShow/hide protein sequence
MNQPEAQTAALEDALKVVVTEGAKSLIVRDLEGEGEGKEGIEEDIVKKKQKKEKKGEEEKKKKEEKKIFRRPPPSPAAGGDRPPELKKKVMGEGRR