; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026279 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026279
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold13:14458123..14464612
RNA-Seq ExpressionSpg026279
SyntenySpg026279
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3952870.1 hypothetical protein CMV_021626 [Castanea mollissima]4.6e-1028.71Show/hide
Query:  LGQGVAKLVAEKVGRITDEEGEMEARRVIQRKFIRLKVEINLTKALTRGLIVIN-EGVKKWVWIKYQRLPRFCSRCYIIGHTLPWCSIGKRLGEGRSGAS
        + + + K +  K+GR+   E +  A +  Q KF+R++VE+ + K L RG  V N EG + WV  +Y+RLP FC  C ++GH    C     L      A 
Subjt:  LGQGVAKLVAEKVGRITDEEGEMEARRVIQRKFIRLKVEINLTKALTRGLIVIN-EGVKKWVWIKYQRLPRFCSRCYIIGHTLPWCSIGKRLGEGRSGAS

Query:  PMFGEWLRAG-------------VSPVKQREDHASLWRCEERHQGRMGVNAESVPVTNFADSAGKDPGIDGGVSSIVPTEGTGIVEHVGQAAQESVAETE
          +GEWL+AG               PV ++E  +SL    E  +  +G   ES+P    +D AG++ G +  + +       G+V    +  +E ++   
Subjt:  PMFGEWLRAG-------------VSPVKQREDHASLWRCEERHQGRMGVNAESVPVTNFADSAGKDPGIDGGVSSIVPTEGTGIVEHVGQAAQESVAETE

Query:  AG
        +G
Subjt:  AG

KAF4346449.1 hypothetical protein G4B88_022248 [Cannabis sativa]6.0e-1034.46Show/hide
Query:  VAEKVGRITDEEGEMEARRVIQRKFIRLKVEINLTKALTRGLIVINE-GVKKWVWIKYQRLPRFCSRCYIIGHTLPWCSIGKR---LGEGRSGASPMFGE
        +A +VG+      +M  R V++  F+R +V +++ K L  G+ + +E G K W + KY+RLP FC +C  IGH    CS GKR   L +GRS   P+FG 
Subjt:  VAEKVGRITDEEGEMEARRVIQRKFIRLKVEINLTKALTRGLIVINE-GVKKWVWIKYQRLPRFCSRCYIIGHTLPWCSIGKR---LGEGRSGASPMFGE

Query:  WLRAG--------VSPVKQREDHASLWRCEERHQGRMGVNAESVPVTN
        WLR G        V   +  ++  S+ + ++    R G +  S  VTN
Subjt:  WLRAG--------VSPVKQREDHASLWRCEERHQGRMGVNAESVPVTN

KAF4404334.1 hypothetical protein G4B88_014790 [Cannabis sativa]6.0e-1040.37Show/hide
Query:  VAKLVAEKVGRITDEEGEMEARRVIQRKFIRLKVEINLTKALTRGLIVINE-GVKKWVWIKYQRLPRFCSRCYIIGHTLPWCSIGKR---LGEGRSGASP
        + + +A +VG+      +M  R V++  F+R +V ++L K L  G+ + +E G K W + KY+RLP FC +C  IGH    CS GKR   L +GRS   P
Subjt:  VAKLVAEKVGRITDEEGEMEARRVIQRKFIRLKVEINLTKALTRGLIVINE-GVKKWVWIKYQRLPRFCSRCYIIGHTLPWCSIGKR---LGEGRSGASP

Query:  MFGEWLRAG
        +FG WLR G
Subjt:  MFGEWLRAG

XP_027103245.1 uncharacterized protein LOC113724555 [Coffea arabica]9.3e-1130.33Show/hide
Query:  GSREVERQVDRDGMDICARPVSLIGLKRKCWAEGKSKEGSDHRMILLQPTSINSKFQKRFVYNRSWAKNSACMEAVREAWQHEKEGGQAYIVSEKIKGTR
        G  E++ ++DR     C   V  + +  K   E   KE SDH +++L  T +  + ++RF +++ WAK+    E ++ AW  E+ G   + V+ +IK  R
Subjt:  GSREVERQVDRDGMDICARPVSLIGLKRKCWAEGKSKEGSDHRMILLQPTSINSKFQKRFVYNRSWAKNSACMEAVREAWQHEKEGGQAYIVSEKIKGTR

Query:  VAILRWRRKAKANSNAEIQSVE
        +A++ W R  K N+ A+IQ ++
Subjt:  VAILRWRRKAKANSNAEIQSVE

XP_027122102.1 uncharacterized protein LOC113739055 [Coffea arabica]3.5e-1031.01Show/hide
Query:  GSREVERQVDRDGMDICARPVSLIGLKRKCWAEGKSKEGSDHRMILLQPTSINSKFQKRFVYNRSWAKNSACMEAVREAWQHEKEGGQAYIVSEKIKGTR
        G  EV+ ++DR     C   V  + +  K   E    E SDH ++++         ++RF +++ WAK+ A +  +R AW  E++G + Y V+ KI+  R
Subjt:  GSREVERQVDRDGMDICARPVSLIGLKRKCWAEGKSKEGSDHRMILLQPTSINSKFQKRFVYNRSWAKNSACMEAVREAWQHEKEGGQAYIVSEKIKGTR

Query:  VAILRWRRKAKANSNAEIQSVEGDDEVAR
        VA++ W R  K N+  +IQ ++   +VAR
Subjt:  VAILRWRRKAKANSNAEIQSVEGDDEVAR

TrEMBL top hitse value%identityAlignment
A0A2N9G189 CCHC-type domain-containing protein5.9e-1136.75Show/hide
Query:  QGVAKLVAEKVGRITDEEGEMEA--RRVIQRKFIRLKVEINLTKALTRG-LIVINEGVKKWVWIKYQRLPRFCSRCYIIGHTLPWCSIGKRLGEGRSGAS
        + + K V E + R   +  E++     +    ++R++V I++TK L RG ++V +EG   WV  +Y+ LP FC RC ++GH +  C  G+R GE  +  S
Subjt:  QGVAKLVAEKVGRITDEEGEMEA--RRVIQRKFIRLKVEINLTKALTRG-LIVINEGVKKWVWIKYQRLPRFCSRCYIIGHTLPWCSIGKRLGEGRSGAS

Query:  PMFGEWLRAGVSPVKQR
         M+G+WLRA   PV+QR
Subjt:  PMFGEWLRAGVSPVKQR

A0A6P6VLB2 uncharacterized protein LOC1137245554.5e-1130.33Show/hide
Query:  GSREVERQVDRDGMDICARPVSLIGLKRKCWAEGKSKEGSDHRMILLQPTSINSKFQKRFVYNRSWAKNSACMEAVREAWQHEKEGGQAYIVSEKIKGTR
        G  E++ ++DR     C   V  + +  K   E   KE SDH +++L  T +  + ++RF +++ WAK+    E ++ AW  E+ G   + V+ +IK  R
Subjt:  GSREVERQVDRDGMDICARPVSLIGLKRKCWAEGKSKEGSDHRMILLQPTSINSKFQKRFVYNRSWAKNSACMEAVREAWQHEKEGGQAYIVSEKIKGTR

Query:  VAILRWRRKAKANSNAEIQSVE
        +A++ W R  K N+ A+IQ ++
Subjt:  VAILRWRRKAKANSNAEIQSVE

A0A6P6X866 uncharacterized protein LOC1137390551.7e-1031.01Show/hide
Query:  GSREVERQVDRDGMDICARPVSLIGLKRKCWAEGKSKEGSDHRMILLQPTSINSKFQKRFVYNRSWAKNSACMEAVREAWQHEKEGGQAYIVSEKIKGTR
        G  EV+ ++DR     C   V  + +  K   E    E SDH ++++         ++RF +++ WAK+ A +  +R AW  E++G + Y V+ KI+  R
Subjt:  GSREVERQVDRDGMDICARPVSLIGLKRKCWAEGKSKEGSDHRMILLQPTSINSKFQKRFVYNRSWAKNSACMEAVREAWQHEKEGGQAYIVSEKIKGTR

Query:  VAILRWRRKAKANSNAEIQSVEGDDEVAR
        VA++ W R  K N+  +IQ ++   +VAR
Subjt:  VAILRWRRKAKANSNAEIQSVEGDDEVAR

A0A7J6DLE4 CCHC-type domain-containing protein2.9e-1034.46Show/hide
Query:  VAEKVGRITDEEGEMEARRVIQRKFIRLKVEINLTKALTRGLIVINE-GVKKWVWIKYQRLPRFCSRCYIIGHTLPWCSIGKR---LGEGRSGASPMFGE
        +A +VG+      +M  R V++  F+R +V +++ K L  G+ + +E G K W + KY+RLP FC +C  IGH    CS GKR   L +GRS   P+FG 
Subjt:  VAEKVGRITDEEGEMEARRVIQRKFIRLKVEINLTKALTRGLIVINE-GVKKWVWIKYQRLPRFCSRCYIIGHTLPWCSIGKR---LGEGRSGASPMFGE

Query:  WLRAG--------VSPVKQREDHASLWRCEERHQGRMGVNAESVPVTN
        WLR G        V   +  ++  S+ + ++    R G +  S  VTN
Subjt:  WLRAG--------VSPVKQREDHASLWRCEERHQGRMGVNAESVPVTN

A0A7J6I9R3 CCHC-type domain-containing protein2.9e-1040.37Show/hide
Query:  VAKLVAEKVGRITDEEGEMEARRVIQRKFIRLKVEINLTKALTRGLIVINE-GVKKWVWIKYQRLPRFCSRCYIIGHTLPWCSIGKR---LGEGRSGASP
        + + +A +VG+      +M  R V++  F+R +V ++L K L  G+ + +E G K W + KY+RLP FC +C  IGH    CS GKR   L +GRS   P
Subjt:  VAKLVAEKVGRITDEEGEMEARRVIQRKFIRLKVEINLTKALTRGLIVINE-GVKKWVWIKYQRLPRFCSRCYIIGHTLPWCSIGKR---LGEGRSGASP

Query:  MFGEWLRAG
        +FG WLR G
Subjt:  MFGEWLRAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGATGCCTGGCAATGCAAGGGGGTCAAATTCACTGAGATTGAAGAGAATGTGTTCTTATTCGACTTCTCAGATGCGGCATCAATGTTAGGGCAGGGTGTAGCGAA
GTTGGTAGCGGAGAAAGTAGGGAGGATAACCGATGAGGAAGGGGAAATGGAAGCACGGAGGGTGATCCAGCGGAAGTTTATACGACTGAAGGTGGAAATTAACCTAACGA
AGGCACTCACAAGAGGGTTGATAGTCATTAACGAGGGAGTGAAAAAATGGGTTTGGATTAAGTATCAGAGGTTGCCTAGGTTTTGCTCCAGATGTTATATCATTGGGCAT
ACGCTACCGTGGTGCAGCATTGGAAAACGTCTTGGGGAGGGTAGGTCCGGGGCTTCTCCCATGTTTGGTGAATGGTTGAGAGCCGGAGTGTCACCAGTGAAACAAAGGGA
GGACCATGCTAGCTTGTGGCGGTGCGAGGAACGACATCAGGGGAGAATGGGGGTGAACGCAGAATCGGTGCCTGTAACGAATTTTGCGGATTCTGCGGGCAAGGATCCAG
GGATCGATGGGGGTGTATCTTCTATTGTACCTACGGAAGGTACGGGGATTGTTGAGCATGTGGGACAGGCGGCCCAGGAATCTGTTGCTGAGACTGAGGCTGGGCCTAGT
GGGCCAGCGAAGCAGGCCACAGAAGGGGAAAGCCCACGGCGCAGAGGGTCAAGGGAAGTGGAAAGACAGGTTGACCGAGATGGAATGGACATCTGTGCGAGGCCAGTCTC
CTTAATTGGGCTGAAGAGGAAATGTTGGGCCGAAGGAAAATCTAAGGAGGGGTCTGACCACCGCATGATTTTGCTTCAACCCACGTCGATTAATTCCAAGTTCCAGAAGA
GATTTGTCTACAATCGAAGCTGGGCAAAAAATAGTGCGTGTATGGAAGCGGTCAGGGAGGCTTGGCAGCATGAGAAGGAAGGTGGCCAGGCATATATTGTTTCTGAGAAA
ATTAAAGGGACTCGGGTGGCGATACTTCGATGGAGGAGGAAGGCCAAGGCCAATTCAAATGCTGAAATTCAGAGTGTTGAAGGGGATGATGAAGTGGCTCGTATTGGGCT
ACGATACTTTGAAGAATTATTCAAGTCCTCCAACCCACCTGATTTTGACAAGGAATTCGCAAATTGGGAAAGGAAGGTAGACATTTGGCATGATCCGTGGCTTTCGCGGC
CTTACACTTTTAGGCCGATAAGGTGTCTTGATGATGAGTGGAGGAAGGTTGGTGATCTTATAGACAACAGTGGCCCAAGATGGATGGTGGAACAACTGAGGAAATGTCTT
GTGGAGGAGGATGTGAAGTTTGGCCCTACCCTCTCAATGGCACGAGAGGGTTTTCTGTTTGATGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGAACTGAATCATAA
GACAAGACCTAGAATTCTCTCTAGCCTCGCTCTTAGAGAAAGACTCCCACAAGTCTTTTGCCTCCTAGACTTAGAGACATACCGGTGTAACCTCTGTGGTTATTGTGTCA
ATCAAGAAGAAATTTCCAGCGATTATAAGACTAGGAGGCTGCTGCGTTTTCGATCGTTGGAGCGTCGTTGGCGAAGAAAGGTCAAGTCTACAACGAAGATTCTGCCTCCA
GACGCAACAGCGTCGGGACGCTACTCCAACAGCGTCTCGACGCTGTCTCAATACCACAGGCGCTCAGATAAGGAAAGTGCACAGCGTCGGGACGCTGCGATTATAGCGTC
TCGACGCTGTCACGATGGCGGCGCTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGATGCCTGGCAATGCAAGGGGGTCAAATTCACTGAGATTGAAGAGAATGTGTTCTTATTCGACTTCTCAGATGCGGCATCAATGTTAGGGCAGGGTGTAGCGAA
GTTGGTAGCGGAGAAAGTAGGGAGGATAACCGATGAGGAAGGGGAAATGGAAGCACGGAGGGTGATCCAGCGGAAGTTTATACGACTGAAGGTGGAAATTAACCTAACGA
AGGCACTCACAAGAGGGTTGATAGTCATTAACGAGGGAGTGAAAAAATGGGTTTGGATTAAGTATCAGAGGTTGCCTAGGTTTTGCTCCAGATGTTATATCATTGGGCAT
ACGCTACCGTGGTGCAGCATTGGAAAACGTCTTGGGGAGGGTAGGTCCGGGGCTTCTCCCATGTTTGGTGAATGGTTGAGAGCCGGAGTGTCACCAGTGAAACAAAGGGA
GGACCATGCTAGCTTGTGGCGGTGCGAGGAACGACATCAGGGGAGAATGGGGGTGAACGCAGAATCGGTGCCTGTAACGAATTTTGCGGATTCTGCGGGCAAGGATCCAG
GGATCGATGGGGGTGTATCTTCTATTGTACCTACGGAAGGTACGGGGATTGTTGAGCATGTGGGACAGGCGGCCCAGGAATCTGTTGCTGAGACTGAGGCTGGGCCTAGT
GGGCCAGCGAAGCAGGCCACAGAAGGGGAAAGCCCACGGCGCAGAGGGTCAAGGGAAGTGGAAAGACAGGTTGACCGAGATGGAATGGACATCTGTGCGAGGCCAGTCTC
CTTAATTGGGCTGAAGAGGAAATGTTGGGCCGAAGGAAAATCTAAGGAGGGGTCTGACCACCGCATGATTTTGCTTCAACCCACGTCGATTAATTCCAAGTTCCAGAAGA
GATTTGTCTACAATCGAAGCTGGGCAAAAAATAGTGCGTGTATGGAAGCGGTCAGGGAGGCTTGGCAGCATGAGAAGGAAGGTGGCCAGGCATATATTGTTTCTGAGAAA
ATTAAAGGGACTCGGGTGGCGATACTTCGATGGAGGAGGAAGGCCAAGGCCAATTCAAATGCTGAAATTCAGAGTGTTGAAGGGGATGATGAAGTGGCTCGTATTGGGCT
ACGATACTTTGAAGAATTATTCAAGTCCTCCAACCCACCTGATTTTGACAAGGAATTCGCAAATTGGGAAAGGAAGGTAGACATTTGGCATGATCCGTGGCTTTCGCGGC
CTTACACTTTTAGGCCGATAAGGTGTCTTGATGATGAGTGGAGGAAGGTTGGTGATCTTATAGACAACAGTGGCCCAAGATGGATGGTGGAACAACTGAGGAAATGTCTT
GTGGAGGAGGATGTGAAGTTTGGCCCTACCCTCTCAATGGCACGAGAGGGTTTTCTGTTTGATGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGAACTGAATCATAA
GACAAGACCTAGAATTCTCTCTAGCCTCGCTCTTAGAGAAAGACTCCCACAAGTCTTTTGCCTCCTAGACTTAGAGACATACCGGTGTAACCTCTGTGGTTATTGTGTCA
ATCAAGAAGAAATTTCCAGCGATTATAAGACTAGGAGGCTGCTGCGTTTTCGATCGTTGGAGCGTCGTTGGCGAAGAAAGGTCAAGTCTACAACGAAGATTCTGCCTCCA
GACGCAACAGCGTCGGGACGCTACTCCAACAGCGTCTCGACGCTGTCTCAATACCACAGGCGCTCAGATAAGGAAAGTGCACAGCGTCGGGACGCTGCGATTATAGCGTC
TCGACGCTGTCACGATGGCGGCGCTCGTTAG
Protein sequenceShow/hide protein sequence
MLDAWQCKGVKFTEIEENVFLFDFSDAASMLGQGVAKLVAEKVGRITDEEGEMEARRVIQRKFIRLKVEINLTKALTRGLIVINEGVKKWVWIKYQRLPRFCSRCYIIGH
TLPWCSIGKRLGEGRSGASPMFGEWLRAGVSPVKQREDHASLWRCEERHQGRMGVNAESVPVTNFADSAGKDPGIDGGVSSIVPTEGTGIVEHVGQAAQESVAETEAGPS
GPAKQATEGESPRRRGSREVERQVDRDGMDICARPVSLIGLKRKCWAEGKSKEGSDHRMILLQPTSINSKFQKRFVYNRSWAKNSACMEAVREAWQHEKEGGQAYIVSEK
IKGTRVAILRWRRKAKANSNAEIQSVEGDDEVARIGLRYFEELFKSSNPPDFDKEFANWERKVDIWHDPWLSRPYTFRPIRCLDDEWRKVGDLIDNSGPRWMVEQLRKCL
VEEDVKFGPTLSMAREGFLFDGWTTNRLFIRGELNHKTRPRILSSLALRERLPQVFCLLDLETYRCNLCGYCVNQEEISSDYKTRRLLRFRSLERRWRRKVKSTTKILPP
DATASGRYSNSVSTLSQYHRRSDKESAQRRDAAIIASRRCHDGGAR