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Spg026287 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026287
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionsomething about silencing protein 10
Genome locationscaffold13:14958383..14959417
RNA-Seq ExpressionSpg026287
SyntenySpg026287
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025385.1 Something about silencing protein 10 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-2496.92Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
        MGKRKSHKQ+KRNSKRR ADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE

XP_022960128.1 something about silencing protein 10 [Cucurbita moschata]3.5e-2496.92Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
        MGKRKSHKQ+KRNSKRR ADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE

XP_023004169.1 something about silencing protein 10 [Cucurbita maxima]3.5e-2496.92Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
        MGKRKSHKQ+KRNSKRR ADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE

XP_023515008.1 something about silencing protein 10 isoform X1 [Cucurbita pepo subsp. pepo]3.5e-2496.92Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
        MGKRKSHKQ+KRNSKRR ADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE

XP_023515010.1 something about silencing protein 10 isoform X2 [Cucurbita pepo subsp. pepo]3.5e-2496.92Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
        MGKRKSHKQ+KRNSKRR ADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE

TrEMBL top hitse value%identityAlignment
A0A1S3CBM7 something about silencing protein 10 isoform X26.6e-2187.69Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
        MGKRKS+KQDK+NSKRR A+DDAASEDMDDEIDAFHRQRDVIPLDINGD+ ESD+DAE PVFNLE
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE

A0A1S3CCS3 something about silencing protein 10 isoform X16.6e-2187.69Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
        MGKRKS+KQDK+NSKRR A+DDAASEDMDDEIDAFHRQRDVIPLDINGD+ ESD+DAE PVFNLE
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE

A0A5A7TE39 Something about silencing protein 10 isoform X16.6e-2186.36Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEV
        MGKRKS+KQ+K+NSKRR A+DDAASEDMDDEIDAFHRQRDVIPLDINGD+ ESD+DAE PVFNLEV
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEV

A0A6J1H7Y4 something about silencing protein 101.7e-2496.92Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
        MGKRKSHKQ+KRNSKRR ADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE

A0A6J1KVH0 something about silencing protein 101.7e-2496.92Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
        MGKRKSHKQ+KRNSKRR ADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G43650.1 Sas10/U3 ribonucleoprotein (Utp) family protein5.2e-1054.55Show/hide
Query:  KRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE
        KR+SK      D   +  DDEIDAFH+QRD++PLD+N D  ESDED   PVF+L+
Subjt:  KRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAAGAGAAAGAGCCATAAGCAAGACAAGAGGAACTCTAAGAGAAGAAATGCCGATGATGATGCTGCCTCTGAAGATATGGATGATGAAATTGATGCATTTCACAG
GCAGAGGGATGTTATTCCACTTGATATTAACGGTGACGCTCCAGAGTCAGATGAAGATGCTGAGCATCCTGTCTTTAATTTAGAGGTGAAAGTCCCGATTAAGGTTAGGT
TCTTTATTTGCCAAGTGCTTCATGGTAGAGTTAATACCTTCGATAGGCTCGTGAGAAGGAATTATCCTCTGATTGGCCCTTTTTGTTGCATTCTTTGTCGAAATGCAGAG
GAAGACTTGGATCATATTCTTTGGAGATATGATTTTTCCCGCACAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAAGAGAAAGAGCCATAAGCAAGACAAGAGGAACTCTAAGAGAAGAAATGCCGATGATGATGCTGCCTCTGAAGATATGGATGATGAAATTGATGCATTTCACAG
GCAGAGGGATGTTATTCCACTTGATATTAACGGTGACGCTCCAGAGTCAGATGAAGATGCTGAGCATCCTGTCTTTAATTTAGAGGTGAAAGTCCCGATTAAGGTTAGGT
TCTTTATTTGCCAAGTGCTTCATGGTAGAGTTAATACCTTCGATAGGCTCGTGAGAAGGAATTATCCTCTGATTGGCCCTTTTTGTTGCATTCTTTGTCGAAATGCAGAG
GAAGACTTGGATCATATTCTTTGGAGATATGATTTTTCCCGCACAGTTTGA
Protein sequenceShow/hide protein sequence
MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKVRFFICQVLHGRVNTFDRLVRRNYPLIGPFCCILCRNAE
EDLDHILWRYDFSRTV