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Spg026303 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026303
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAP2/ERF domain-containing transcription factor
Genome locationscaffold13:16594295..16595358
RNA-Seq ExpressionSpg026303
SyntenySpg026303
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650665.1 hypothetical protein Csa_011527 [Cucumis sativus]3.9e-3786.32Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK
        EKSYRGVR   WGKYA EIRDS RHGVRVW+GTFDS EA ALAYDQAAF MRG MAVLNFPVEMVRESLQDIEY LEEGCSP+VALKRKHS RRK
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK

XP_004151982.1 ethylene-response factor C3 [Cucumis sativus]3.9e-3786.32Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK
        EKSYRGVR   WGKYA EIRDS RHGVRVW+GTFDS EA ALAYDQAAF MRG MAVLNFPVEMVRESLQDIEY LEEGCSP+VALKRKHS RRK
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK

XP_008447432.1 PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo]1.5e-3684.21Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK
        EK+YRGVR   WGKYA EIRDS RHGVRVW+GTFDS EA ALAYDQAAF MRG MAVLNFPVEMVRESLQDIEY+LEEGCSP+VALK+KHS RRK
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK

XP_022146006.1 ethylene-responsive transcription factor 1B-like [Momordica charantia]8.7e-3785.26Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK
        EKSYRGVR   WGKYA EIRDS RHGVRVW+GTFDS EA ALAYDQAAF MRG MAVLNFPVEMVRESLQDI+Y+LEEGCSP+VALKRKHS RRK
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK

XP_038888342.1 ethylene-response factor C3-like [Benincasa hispida]8.7e-3785.26Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK
        EKSYRGVR   WGKYA EIRDS RHGVRVW+GTFDS EA ALAYDQAAF MRG MAVLNFPVEMVRESLQDI+Y+LEEGCSP+VALKRKHS RRK
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK

TrEMBL top hitse value%identityAlignment
A0A0A0L7G2 AP2/ERF domain-containing protein1.9e-3786.32Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK
        EKSYRGVR   WGKYA EIRDS RHGVRVW+GTFDS EA ALAYDQAAF MRG MAVLNFPVEMVRESLQDIEY LEEGCSP+VALKRKHS RRK
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK

A0A1S3BHE9 ethylene-responsive transcription factor 1B-like7.2e-3784.21Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK
        EK+YRGVR   WGKYA EIRDS RHGVRVW+GTFDS EA ALAYDQAAF MRG MAVLNFPVEMVRESLQDIEY+LEEGCSP+VALK+KHS RRK
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK

A0A5A7T5F2 Ethylene-responsive transcription factor 1B-like7.2e-3784.21Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK
        EK+YRGVR   WGKYA EIRDS RHGVRVW+GTFDS EA ALAYDQAAF MRG MAVLNFPVEMVRESLQDIEY+LEEGCSP+VALK+KHS RRK
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK

A0A6J1CY30 ethylene-responsive transcription factor 1B-like4.2e-3785.26Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK
        EKSYRGVR   WGKYA EIRDS RHGVRVW+GTFDS EA ALAYDQAAF MRG MAVLNFPVEMVRESLQDI+Y+LEEGCSP+VALKRKHS RRK
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK

A0A6J1HV48 ethylene-responsive transcription factor 1B-like1.2e-3684.21Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK
        EKSYRGVR   WGKYA EIRDS RHGVRVW+GTFDS EA ALAYDQAAF MRG +AVLNFPVEMVRESLQDI+Y+LEEGCSP+VALKRKHS RRK
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK

SwissProt top hitse value%identityAlignment
A0A3Q7I5Y9 Ethylene-response factor C33.7e-3064.21Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK
        +K+YRGVR   WGKYA EIRDS R+GVRVW+GTFD+ E  ALAYDQAAF MRG MA+LNFPVE+V+ESL +++ R +  CSP++ LK+++S RRK
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK

O04681 Pathogenesis-related genes transcriptional activator PTI53.8e-1966.18Show/hide
Query:  KSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESL
        K YRGVR   WGKYA EIRDS RHG RVW+GTF++ E  ALAYD+AAF MRG  A+LNFP E+V  S+
Subjt:  KSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESL

Q8LDC8 Ethylene-responsive transcription factor 1B2.0e-3168.42Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK
        EKSYRGVR   WGK+A EIRDS R+G+RVW+GTF+S E  ALAYDQAAF MRG  A+LNF  E V+ESL +I+Y  E+GCSP+VALKRKHS RR+
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK

Q8VYM0 Ethylene-responsive transcription factor 151.7e-2763.54Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIE-YRLEEGCSPMVALKRKHSPRRK
        E+SYRGVR   WGK+A EIRDS R+G+RVW+GTFD  E  ALAYDQAAF  +G +A LNFPVE+VRESL+ +E   L +G SP++ALKRKHS R +
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIE-YRLEEGCSPMVALKRKHSPRRK

Q9LND1 Ethylene-responsive transcription factor ERF0945.9e-2863.54Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIE-YRLEEGCSPMVALKRKHSPRRK
        EKSYRGVR   WGK+A EIRDS R G+RVW+GTFD+ EA ALAYDQAAF ++G +AVLNFP ++V ESL+ +E   L +G SP++ALKRKHS R +
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIE-YRLEEGCSPMVALKRKHSPRRK

Arabidopsis top hitse value%identityAlignment
AT1G06160.1 octadecanoid-responsive Arabidopsis AP2/ERF 594.2e-2963.54Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIE-YRLEEGCSPMVALKRKHSPRRK
        EKSYRGVR   WGK+A EIRDS R G+RVW+GTFD+ EA ALAYDQAAF ++G +AVLNFP ++V ESL+ +E   L +G SP++ALKRKHS R +
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIE-YRLEEGCSPMVALKRKHSPRRK

AT2G31230.1 ethylene-responsive element binding factor 151.2e-2863.54Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIE-YRLEEGCSPMVALKRKHSPRRK
        E+SYRGVR   WGK+A EIRDS R+G+RVW+GTFD  E  ALAYDQAAF  +G +A LNFPVE+VRESL+ +E   L +G SP++ALKRKHS R +
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIE-YRLEEGCSPMVALKRKHSPRRK

AT3G23220.1 Integrase-type DNA-binding superfamily protein1.9e-1866.67Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVE
        E  YRGVR   WGKYA EIRDS RHG RVW+GTF++ E  A AYD+AAF MRG+ A+LNFP E
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVE

AT3G23240.1 ethylene response factor 11.4e-3268.42Show/hide
Query:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK
        EKSYRGVR   WGK+A EIRDS R+G+RVW+GTF+S E  ALAYDQAAF MRG  A+LNF  E V+ESL +I+Y  E+GCSP+VALKRKHS RR+
Subjt:  EKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRK

AT5G43410.1 Integrase-type DNA-binding superfamily protein1.9e-1868.33Show/hide
Query:  YRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVE
        YRGVR   WGKYA EIRDS +HG RVW+GTFD+ E  A AYDQAA+ MRG+ A+LNFP E
Subjt:  YRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAGTTACAGAGGAGTGAGGTGGTGGTCGTGGGGGAAATACGCGACGGAGATTAGGGATTCAATGAGGCATGGAGTTAGGGTTTGGGTTGGGACTTTCGATAG
CGTTGAAGCTACCGCTTTAGCTTACGATCAAGCGGCATTTTTGATGAGAGGAGAAATGGCGGTGTTGAATTTTCCGGTGGAAATGGTGAGAGAATCACTTCAGGACATTG
AGTATCGACTAGAAGAAGGATGCTCGCCGATGGTGGCTTTGAAGAGAAAACACTCACCAAGAAGGAAAGAAGACTTGAAGATATGCAAATGGAAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAGTTACAGAGGAGTGAGGTGGTGGTCGTGGGGGAAATACGCGACGGAGATTAGGGATTCAATGAGGCATGGAGTTAGGGTTTGGGTTGGGACTTTCGATAG
CGTTGAAGCTACCGCTTTAGCTTACGATCAAGCGGCATTTTTGATGAGAGGAGAAATGGCGGTGTTGAATTTTCCGGTGGAAATGGTGAGAGAATCACTTCAGGACATTG
AGTATCGACTAGAAGAAGGATGCTCGCCGATGGTGGCTTTGAAGAGAAAACACTCACCAAGAAGGAAAGAAGACTTGAAGATATGCAAATGGAAAGCTTGA
Protein sequenceShow/hide protein sequence
MEKSYRGVRWWSWGKYATEIRDSMRHGVRVWVGTFDSVEATALAYDQAAFLMRGEMAVLNFPVEMVRESLQDIEYRLEEGCSPMVALKRKHSPRRKEDLKICKWKA