; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026343 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026343
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDExH-box ATP-dependent RNA helicase DExH9-like
Genome locationscaffold13:15448451..15452612
RNA-Seq ExpressionSpg026343
SyntenySpg026343
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
GO:0006401 - RNA catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR012961 - ATP-dependent RNA helicase Ski2, C-terminal
IPR025696 - rRNA-processing arch domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575215.1 DExH-box ATP-dependent RNA helicase DExH9, partial [Cucurbita argyrosperma subsp. sororia]2.2e-15495.56Show/hide
Query:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE
        V+   IS ISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEED+KIQSSSYRKA+RRTEALESLFDKHEVAKSALV+QKLKALHLKQE
Subjt:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE

Query:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE
        LTAKI+SIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEI++LLSCFVWQEKLQDAAKPREE
Subjt:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE

Query:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV
        LELLFIQLQDTARRVAK QLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQL LAAKSIGETELE+KFEEAV
Subjt:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV

Query:  SKIKRDIVFAASLYL
        SKIKRDIVFAASLYL
Subjt:  SKIKRDIVFAASLYL

KAG7013780.1 DExH-box ATP-dependent RNA helicase DExH9 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-15495.56Show/hide
Query:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE
        V+   IS ISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEED+KIQSSSYRKA+RRTEALESLFDKHEVAKSALV+QKLKALHLKQE
Subjt:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE

Query:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE
        LTAKI+SIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEI++LLSCFVWQEKLQDAAKPREE
Subjt:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE

Query:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV
        LELLFIQLQDTARRVAK QLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQL LAAKSIGETELE+KFEEAV
Subjt:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV

Query:  SKIKRDIVFAASLYL
        SKIKRDIVFAASLYL
Subjt:  SKIKRDIVFAASLYL

XP_023006494.1 DExH-box ATP-dependent RNA helicase DExH9-like [Cucurbita maxima]2.2e-15495.56Show/hide
Query:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE
        V+   IS ISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEED+KIQSSSYRKA+RRTEALESLFDKHEVAKSALV+QKLKALHLKQE
Subjt:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE

Query:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE
        LTAKI+SIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEI++LLSCFVWQEKLQDAAKPREE
Subjt:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE

Query:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV
        LELLFIQLQDTARRVAK QLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQL LAAKSIGETELE+KFEEAV
Subjt:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV

Query:  SKIKRDIVFAASLYL
        SKIKRDIVFAASLYL
Subjt:  SKIKRDIVFAASLYL

XP_023548429.1 DExH-box ATP-dependent RNA helicase DExH9-like [Cucurbita pepo subsp. pepo]2.2e-15495.56Show/hide
Query:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE
        V+   IS ISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEED+KIQSSSYRKA+RRTEALESLFDKHEVAKSALV+QKLKALHLKQE
Subjt:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE

Query:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE
        LTAKI+SIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEI++LLSCFVWQEKLQDAAKPREE
Subjt:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE

Query:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV
        LELLFIQLQDTARRVAK QLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQL LAAKSIGETELE+KFEEAV
Subjt:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV

Query:  SKIKRDIVFAASLYL
        SKIKRDIVFAASLYL
Subjt:  SKIKRDIVFAASLYL

XP_038874775.1 DExH-box ATP-dependent RNA helicase DExH9 isoform X2 [Benincasa hispida]3.7e-15495.24Show/hide
Query:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE
        V+   IS ISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEED+KIQSSSYRKA+RRTEALESLFDKHEVAKS LVEQKLKALHLKQE
Subjt:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE

Query:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE
        LTAKI+SIKKT+RSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEE+V+LLSCFVWQEKLQDAAKPREE
Subjt:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE

Query:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV
        LELLFIQLQDTARRVAKVQLECKVEIDVEGFV+SFRPDIMEAVY WAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELE+KFEEAV
Subjt:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV

Query:  SKIKRDIVFAASLYL
        SKIKRDIVFAASLYL
Subjt:  SKIKRDIVFAASLYL

TrEMBL top hitse value%identityAlignment
A0A1S3C6P7 DExH-box ATP-dependent RNA helicase DExH99.8e-15393.97Show/hide
Query:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE
        V+   IS I+TLASIR+LIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEED+KIQSSSYRKA+RRTEALESLFDKHEVA+S LVE+KLKALHLKQE
Subjt:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE

Query:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE
        LTAKI+SIKK +RSSS LAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIV+LLSCFVWQEKLQDAAKPREE
Subjt:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE

Query:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV
        LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILA+KSIGETELE+KFEEAV
Subjt:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV

Query:  SKIKRDIVFAASLYL
        SKIKRDIVFAASLYL
Subjt:  SKIKRDIVFAASLYL

A0A5D3CSJ2 DExH-box ATP-dependent RNA helicase DExH99.8e-15393.97Show/hide
Query:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE
        V+   IS I+TLASIR+LIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEED+KIQSSSYRKA+RRTEALESLFDKHEVA+S LVE+KLKALHLKQE
Subjt:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE

Query:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE
        LTAKI+SIKK +RSSS LAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIV+LLSCFVWQEKLQDAAKPREE
Subjt:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE

Query:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV
        LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILA+KSIGETELE+KFEEAV
Subjt:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV

Query:  SKIKRDIVFAASLYL
        SKIKRDIVFAASLYL
Subjt:  SKIKRDIVFAASLYL

A0A6J1D1Q3 DExH-box ATP-dependent RNA helicase DExH97.5e-15394.6Show/hide
Query:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE
        V+   IS ISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLD EED+KIQS SYRKAMRR EALESLFDKHEVAKS LVEQKLKALH+KQE
Subjt:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE

Query:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE
        LTAKI+SIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEE+VSLLSCFVWQEKLQDAAKPREE
Subjt:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE

Query:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV
        LELLFIQLQDTARRVAKVQLECKV+IDVEGFV SFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGET+L+SKFEEAV
Subjt:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV

Query:  SKIKRDIVFAASLYL
        SKIKRDIVFAASLYL
Subjt:  SKIKRDIVFAASLYL

A0A6J1H3H0 DExH-box ATP-dependent RNA helicase DExH9-like4.0e-15495.24Show/hide
Query:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE
        V+   IS I TLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEED+KIQSSSYRKA+RRTEALESLFDKHEVAKSALV+QKLKALHLKQE
Subjt:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE

Query:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE
        LTAKI+SIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEI++LLSCFVWQEKLQDAAKPREE
Subjt:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE

Query:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV
        LELLFIQLQDTARRVAK QLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQL LAAKSIGETELE+KFEEAV
Subjt:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV

Query:  SKIKRDIVFAASLYL
        SKIKRDIVFAASLYL
Subjt:  SKIKRDIVFAASLYL

A0A6J1L2B4 DExH-box ATP-dependent RNA helicase DExH9-like1.0e-15495.56Show/hide
Query:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE
        V+   IS ISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEED+KIQSSSYRKA+RRTEALESLFDKHEVAKSALV+QKLKALHLKQE
Subjt:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE

Query:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE
        LTAKI+SIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEI++LLSCFVWQEKLQDAAKPREE
Subjt:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE

Query:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV
        LELLFIQLQDTARRVAK QLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQL LAAKSIGETELE+KFEEAV
Subjt:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV

Query:  SKIKRDIVFAASLYL
        SKIKRDIVFAASLYL
Subjt:  SKIKRDIVFAASLYL

SwissProt top hitse value%identityAlignment
O14232 ATP-dependent RNA helicase mtr47.9e-6745.25Show/hide
Query:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE
        V+ + +S +  +A IR+ +PNDL     +    K +SEV  RFP+G+ LLDP E++ I+  ++ K M++   LES    + +   + +E+K      K  
Subjt:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE

Query:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQ-DAAKPRE
        L  ++K +KK +  + ++   DEL +RKRVLRRLG+ TSDDV+E+KG+VACEISS + L L+EL+FNG+F D+  E+  +LLSC V+QEK + +  + +E
Subjt:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQ-DAAKPRE

Query:  ELELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEA
        EL      LQ+ ARR+AKV  E K E++ E +V+SF+P +ME VYAWA G+ F +I ++T V+EGSLIR  RRLEE+++Q++ AAK IG T L+ K E+ 
Subjt:  ELELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEA

Query:  VSKIKRDIVFAASLYL
        ++ I RDIVF+ASLYL
Subjt:  VSKIKRDIVFAASLYL

P42285 Exosome RNA helicase MTR41.2e-7848.58Show/hide
Query:  VRVLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLK
        ++V+   + ++S ++S+R+ IP DL P++ R++ LK I EV  RFP G+PLLDP +D+ IQ    +K +++ EA E     H +     +E        K
Subjt:  VRVLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLK

Query:  QELTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPR
         ++   IKS K+ ++ +  +   DELK RKRVLRRLG+ TS DV+E+KG+VACEISSA+EL L+E+MFNG+F D+  E+  +LLSCFV+QE   +  K  
Subjt:  QELTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPR

Query:  EELELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEE
        E+L     Q+Q+ A+R+AKV  E K+EID E ++SSF+P +M+ VY WA G+ F  I ++T VFEGS+IR +RRLEE+L+Q+  AAK+IG TELE+KF E
Subjt:  EELELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEE

Query:  AVSKIKRDIVFAASLYL
         ++KIKRDIVFAASLYL
Subjt:  AVSKIKRDIVFAASLYL

Q9CZU3 Exosome RNA helicase MTR44.5e-7848.58Show/hide
Query:  VRVLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLK
        ++V+   + ++S ++++R+ IP DL P++ R++ LK I EV  RFP GVPLLDP +D+ IQ    +K +++ EA E     H +     +E        K
Subjt:  VRVLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLK

Query:  QELTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPR
         ++   IKS K+ ++ +  +   DELK RKRVLRRLG+ TS DV+E+KG+VACEISSA+EL L+E+MFNG+F D+  E+  +LLSCFV+QE   +  K  
Subjt:  QELTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPR

Query:  EELELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEE
        E+L     Q+Q+ A+R+AKV  E K+EID E ++SSF+P +M+ VY WA G+ F  I ++T VFEGS+IR +RRLEE+L+Q+  AAK+IG TELE+KF E
Subjt:  EELELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEE

Query:  AVSKIKRDIVFAASLYL
         ++KIKRDIVFAASLYL
Subjt:  AVSKIKRDIVFAASLYL

Q9XIF2 DExH-box ATP-dependent RNA helicase DExH93.0e-13078.41Show/hide
Query:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE
        V+   +S I +L+S  + IP DL+PLEAREN LKK+SE+LSR P G+P LDPE D+KI+SSSY+K +RR EALE+LF+KH++AKS L+ +KLK L +K+E
Subjt:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE

Query:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE
        L AKIKS+KKT+RSS+ALAFKDELKARKRVLRRLGYITSD+VVELKGKVACEISSA ELTL+ELMF+G+FKD KVEE+VSLLSCFVW+E+L DAAKPREE
Subjt:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE

Query:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV
        L+LLFIQLQDTARRVA+VQL+CKVEIDVE FV SFRPDIMEAVYAWAKGSKFYE+MEI +VFEGSLIRAIRR+EEVLQQLI+AAKSIGET+LE+K EEAV
Subjt:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV

Query:  SKIKRDIVFAASLYL
        SKIKRDIVFAASLYL
Subjt:  SKIKRDIVFAASLYL

Q9ZVW2 DExH-box ATP-dependent RNA helicase DExH102.3e-6643.4Show/hide
Query:  VRVLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLK
        + V+   + +IS L+ +RI +P+DL P+EAR++ L  + E+ SRFP G P L P +D+ IQ +     + + E +E     H + KS   +Q++K+   K
Subjt:  VRVLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLK

Query:  QELTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPR
         E+  +I+ +K  MR S    F+DELK R RVL++LG+I +D VV++KG+ AC I + +EL ++ELMFNG F D+   ++ +L SCF+  +K  +    R
Subjt:  QELTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPR

Query:  EELELLFIQLQDTARRVAKVQLECKVEIDVEGFV-SSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFE
         EL     QLQD+AR++A++Q ECK+EIDVE +V S+ RP +M+ +Y+W+KG+ F EI+++T +FEGS+IR+ RRL+E L QL  AA+++GE+ LESKF 
Subjt:  EELELLFIQLQDTARRVAKVQLECKVEIDVEGFV-SSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFE

Query:  EAVSKIKRDIVFAASLYL
         A   ++R I+FA SLYL
Subjt:  EAVSKIKRDIVFAASLYL

Arabidopsis top hitse value%identityAlignment
AT1G59760.1 RNA helicase, ATP-dependent, SK12/DOB1 protein2.1e-13178.41Show/hide
Query:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE
        V+   +S I +L+S  + IP DL+PLEAREN LKK+SE+LSR P G+P LDPE D+KI+SSSY+K +RR EALE+LF+KH++AKS L+ +KLK L +K+E
Subjt:  VLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQE

Query:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE
        L AKIKS+KKT+RSS+ALAFKDELKARKRVLRRLGYITSD+VVELKGKVACEISSA ELTL+ELMF+G+FKD KVEE+VSLLSCFVW+E+L DAAKPREE
Subjt:  LTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREE

Query:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV
        L+LLFIQLQDTARRVA+VQL+CKVEIDVE FV SFRPDIMEAVYAWAKGSKFYE+MEI +VFEGSLIRAIRR+EEVLQQLI+AAKSIGET+LE+K EEAV
Subjt:  LELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAV

Query:  SKIKRDIVFAASLYL
        SKIKRDIVFAASLYL
Subjt:  SKIKRDIVFAASLYL

AT2G06990.1 RNA helicase, ATP-dependent, SK12/DOB1 protein1.6e-6743.4Show/hide
Query:  VRVLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLK
        + V+   + +IS L+ +RI +P+DL P+EAR++ L  + E+ SRFP G P L P +D+ IQ +     + + E +E     H + KS   +Q++K+   K
Subjt:  VRVLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLK

Query:  QELTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPR
         E+  +I+ +K  MR S    F+DELK R RVL++LG+I +D VV++KG+ AC I + +EL ++ELMFNG F D+   ++ +L SCF+  +K  +    R
Subjt:  QELTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPR

Query:  EELELLFIQLQDTARRVAKVQLECKVEIDVEGFV-SSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFE
         EL     QLQD+AR++A++Q ECK+EIDVE +V S+ RP +M+ +Y+W+KG+ F EI+++T +FEGS+IR+ RRL+E L QL  AA+++GE+ LESKF 
Subjt:  EELELLFIQLQDTARRVAKVQLECKVEIDVEGFV-SSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFE

Query:  EAVSKIKRDIVFAASLYL
         A   ++R I+FA SLYL
Subjt:  EAVSKIKRDIVFAASLYL

AT3G46960.1 RNA helicase, ATP-dependent, SK12/DOB1 protein4.5e-3332.87Show/hide
Query:  ARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQELTAKIKSIKKTMRSSSALAFKDELKAR
        A   T++++ ++ S   K  P LDP +DLK++ +   +   +   L      ++      +E+ +K     ++    +K ++  M S  AL      + R
Subjt:  ARENTLKKISEVLSRFPKGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQELTAKIKSIKKTMRSSSALAFKDELKAR

Query:  KRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREELELLFIQLQDTARRVAKVQLECKVEID
          VL+ +G I  D VV++KG+VACE++S  EL  +  +F   F++++ EE V+++S FV+Q+K   A     +L     +L DTA R+ ++Q +  ++ID
Subjt:  KRVLRRLGYITSDDVVELKGKVACEISSANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREELELLFIQLQDTARRVAKVQLECKVEID

Query:  VEGFV-SSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAVSKIKRDIVFAASLYL
         E +   + +  ++E VY WAKG+ F EI E+T V EG ++R I RL+E  ++   AA  +G + L  K + A + IKRDIVFAASLY+
Subjt:  VEGFV-SSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAVSKIKRDIVFAASLYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATTTCTACTTTCTTAAACTTGAGCTGTTCACTTCCGGAGCCCTCGCTTGATTCTTTTCTTATAGTGCTCCGTTCCTCATTTTGCTTTTCCAGTATCGCGCTGTG
GCGTATTTCTTCCTTCGATGGAGAGCTCGTGCTTTCATGTGGCCCTTTTGGTTCCGACTCTTTCGTAATCATGGATGCTGGAGTTCGAGTCCTCCAGTATGGCATTTCGA
TTATCAGTACTTTAGCTAGTATTCGGATACTCATACCCAATGATCTTTTGCCGTTGGAAGCTCGAGAAAATACATTGAAGAAGATTTCTGAAGTTCTATCAAGATTTCCA
AAGGGAGTACCCCTTCTAGATCCAGAAGAGGACTTGAAAATTCAAAGTAGTTCGTACAGAAAGGCCATGCGTAGAACAGAGGCTTTGGAGAGCCTCTTTGACAAGCATGA
GGTGGCAAAATCAGCACTTGTTGAGCAGAAGCTCAAAGCATTACATTTGAAGCAAGAGTTGACGGCTAAGATCAAGTCAATTAAGAAAACAATGCGTTCTTCTTCTGCAT
TGGCTTTCAAAGATGAACTGAAGGCCAGGAAGCGAGTATTGCGGAGGCTTGGTTACATCACAAGTGATGATGTGGTGGAATTGAAAGGCAAAGTTGCTTGTGAAATCAGT
AGTGCAAATGAATTGACTCTTTCAGAGCTGATGTTCAATGGGGTTTTCAAGGACATAAAAGTGGAGGAAATTGTCTCTCTGCTTTCTTGTTTTGTGTGGCAAGAGAAACT
TCAGGATGCAGCAAAGCCTAGGGAAGAGCTTGAGCTGCTTTTCATTCAATTACAAGACACAGCTCGAAGGGTTGCTAAGGTTCAGCTTGAATGCAAGGTTGAAATTGACG
TGGAGGGCTTTGTGAGTTCATTTAGACCAGATATTATGGAGGCTGTGTATGCTTGGGCAAAAGGATCCAAATTCTATGAGATAATGGAAATAACACAGGTTTTTGAGGGA
AGCTTGATTAGAGCAATTAGACGATTGGAGGAAGTTCTGCAACAACTTATACTAGCAGCGAAGTCCATTGGTGAAACTGAACTTGAATCCAAATTTGAAGAGGCTGTTTC
CAAAATCAAGAGGGATATTGTCTTTGCTGCTTCTCTGTACTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCATTTCTACTTTCTTAAACTTGAGCTGTTCACTTCCGGAGCCCTCGCTTGATTCTTTTCTTATAGTGCTCCGTTCCTCATTTTGCTTTTCCAGTATCGCGCTGTG
GCGTATTTCTTCCTTCGATGGAGAGCTCGTGCTTTCATGTGGCCCTTTTGGTTCCGACTCTTTCGTAATCATGGATGCTGGAGTTCGAGTCCTCCAGTATGGCATTTCGA
TTATCAGTACTTTAGCTAGTATTCGGATACTCATACCCAATGATCTTTTGCCGTTGGAAGCTCGAGAAAATACATTGAAGAAGATTTCTGAAGTTCTATCAAGATTTCCA
AAGGGAGTACCCCTTCTAGATCCAGAAGAGGACTTGAAAATTCAAAGTAGTTCGTACAGAAAGGCCATGCGTAGAACAGAGGCTTTGGAGAGCCTCTTTGACAAGCATGA
GGTGGCAAAATCAGCACTTGTTGAGCAGAAGCTCAAAGCATTACATTTGAAGCAAGAGTTGACGGCTAAGATCAAGTCAATTAAGAAAACAATGCGTTCTTCTTCTGCAT
TGGCTTTCAAAGATGAACTGAAGGCCAGGAAGCGAGTATTGCGGAGGCTTGGTTACATCACAAGTGATGATGTGGTGGAATTGAAAGGCAAAGTTGCTTGTGAAATCAGT
AGTGCAAATGAATTGACTCTTTCAGAGCTGATGTTCAATGGGGTTTTCAAGGACATAAAAGTGGAGGAAATTGTCTCTCTGCTTTCTTGTTTTGTGTGGCAAGAGAAACT
TCAGGATGCAGCAAAGCCTAGGGAAGAGCTTGAGCTGCTTTTCATTCAATTACAAGACACAGCTCGAAGGGTTGCTAAGGTTCAGCTTGAATGCAAGGTTGAAATTGACG
TGGAGGGCTTTGTGAGTTCATTTAGACCAGATATTATGGAGGCTGTGTATGCTTGGGCAAAAGGATCCAAATTCTATGAGATAATGGAAATAACACAGGTTTTTGAGGGA
AGCTTGATTAGAGCAATTAGACGATTGGAGGAAGTTCTGCAACAACTTATACTAGCAGCGAAGTCCATTGGTGAAACTGAACTTGAATCCAAATTTGAAGAGGCTGTTTC
CAAAATCAAGAGGGATATTGTCTTTGCTGCTTCTCTGTACTTGTAG
Protein sequenceShow/hide protein sequence
MSISTFLNLSCSLPEPSLDSFLIVLRSSFCFSSIALWRISSFDGELVLSCGPFGSDSFVIMDAGVRVLQYGISIISTLASIRILIPNDLLPLEARENTLKKISEVLSRFP
KGVPLLDPEEDLKIQSSSYRKAMRRTEALESLFDKHEVAKSALVEQKLKALHLKQELTAKIKSIKKTMRSSSALAFKDELKARKRVLRRLGYITSDDVVELKGKVACEIS
SANELTLSELMFNGVFKDIKVEEIVSLLSCFVWQEKLQDAAKPREELELLFIQLQDTARRVAKVQLECKVEIDVEGFVSSFRPDIMEAVYAWAKGSKFYEIMEITQVFEG
SLIRAIRRLEEVLQQLILAAKSIGETELESKFEEAVSKIKRDIVFAASLYL