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Spg026360 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026360
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold13:15751364..15755079
RNA-Seq ExpressionSpg026360
SyntenySpg026360
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5443558.1 hypothetical protein F2P56_036105, partial [Juglans regia]3.9e-2842.75Show/hide
Query:  CSWSGESTNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIK-WESKIWRFTGIYSHPQAYQRYHTWQLLKCLHNQDDSAWVIGGDFNATLLYEE
        C +    T+  ++DC G+SGGL LLWK ++ V ++S++  HIDA I+  +   WRFTG+Y +P+   RY TW LL+ L++  D  W++GGDFN  L + E
Subjt:  CSWSGESTNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIK-WESKIWRFTGIYSHPQAYQRYHTWQLLKCLHNQDDSAWVIGGDFNATLLYEE

Query:  KEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSN
        K GG P  ++++E FR+++ +C L+DL F G  +TW N
Subjt:  KEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSN

KAF5449841.1 hypothetical protein F2P56_030246 [Juglans regia]1.1e-3048.92Show/hide
Query:  CSWSGESTNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIKWESKI--WRFTGIYSHPQAYQRYHTWQLLKCLHNQDDSAWVIGGDFNATLLYE
        C +     N   +DC G+SGGL LLWK EI V I S++ +HIDA I+ ES +  WRFTG+Y HP A  RY TW L++ L       W++GGDFN  L   
Subjt:  CSWSGESTNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIKWESKI--WRFTGIYSHPQAYQRYHTWQLLKCLHNQDDSAWVIGGDFNATLLYE

Query:  EKEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSN
        EK GG P   +++ENFR++M++C LQDL F G  FTW N
Subjt:  EKEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSN

KAG2711776.1 hypothetical protein I3760_04G092800 [Carya illinoinensis]4.2e-3043.98Show/hide
Query:  MMKHRRRLKISPAVSHENLVLECSWSGESTNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIK-WESKIWRFTGIYSHPQAYQRYHTWQLLKCL
        +M+ RRRL ISPA S+E+ +LE  W+ E T   S    G+SGGL L WKD I + I SY+  HI A+IK  +   W  TG+Y HP++ QR   W+LLK L
Subjt:  MMKHRRRLKISPAVSHENLVLECSWSGESTNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIK-WESKIWRFTGIYSHPQAYQRYHTWQLLKCL

Query:  HNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSNRKLDTG
         +  +  W++ GDFN  L + EK GG    +S+++ FR+++ +C L+DL + G  FTWSNR+ + G
Subjt:  HNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSNRKLDTG

TXG69190.1 hypothetical protein EZV62_004125 [Acer yangbiense]3.9e-2848.44Show/hide
Query:  LDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIKWES-KIWRFTGIYSHPQAYQRYHTWQLLKCLHNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRI
        +D KG SGGLCLLWK EIDV + SY+ FHID  +   + K+WR TG Y HP   QR H W LL+ L       W +GGDFN  +   EK GG    +  +
Subjt:  LDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIKWES-KIWRFTGIYSHPQAYQRYHTWQLLKCLHNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRI

Query:  ENFRSMMDECGLQDLDFVGDSFTWSNRK
         NF+  +++CGL+DL F+G  FTWSNR+
Subjt:  ENFRSMMDECGLQDLDFVGDSFTWSNRK

XP_021304035.1 uncharacterized protein LOC110430565 [Sorghum bicolor]8.7e-2844.12Show/hide
Query:  WSGESTNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIKWESKI-WRFTGIYSHPQAYQRYHTWQLLKCLHNQDDSAWVIGGDFNATLLYEEKE
        W  E  N+ ++D  G SGGL L W+  I+V ++S++ +HID+ IK    I WRFTGIY   +   + +TW++L+CL  Q +  W+  GDFN  L   EKE
Subjt:  WSGESTNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIKWESKI-WRFTGIYSHPQAYQRYHTWQLLKCLHNQDDSAWVIGGDFNATLLYEEKE

Query:  GGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSN
        GG P  +S ++ FR  +++C LQDL F GD FTW N
Subjt:  GGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSN

TrEMBL top hitse value%identityAlignment
A0A2N9E8U7 Reverse transcriptase domain-containing protein1.1e-2841.72Show/hide
Query:  RRLKISPAVSHENLVLEC--SW----SGESTNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIK-WESKIWRFTGIYSHPQAYQRYHTWQLLKC
        RRL+ SPA  +E+  LE   +W    S  S+ +  +  +G SGGL LLW D +++ I+SYT  HIDA I+   S++WRFTG Y HP++++   +W LLK 
Subjt:  RRLKISPAVSHENLVLEC--SW----SGESTNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIK-WESKIWRFTGIYSHPQAYQRYHTWQLLKC

Query:  LHNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSNRK
        L+  D   W+  GDFN  L  EE  G VP    ++++F  +++ CGL D+ F G  FTW NR+
Subjt:  LHNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSNRK

A0A2N9F6W6 Reverse transcriptase domain-containing protein2.5e-2840.49Show/hide
Query:  RRLKISPAVSHENLVLEC--SW----SGESTNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIK-WESKIWRFTGIYSHPQAYQRYHTWQLLKC
        RRLK+SPA  +E + LE   +W    S  S+ +  +  +G SGGL LLW D +++ I++YT  HIDA I+   S++WRFTG Y HP++++   +W LL  
Subjt:  RRLKISPAVSHENLVLEC--SW----SGESTNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIK-WESKIWRFTGIYSHPQAYQRYHTWQLLKC

Query:  LHNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSNRK
        L+  D   W+  GDFN  L  +E+ G VP    ++++F  +++ CGL D+ F G  FTW NR+
Subjt:  LHNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSNRK

A0A2N9FVE9 Reverse transcriptase domain-containing protein2.6e-3042.94Show/hide
Query:  RRLKISPAVSHENLVLECSWSGE------STNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIK-WESKIWRFTGIYSHPQAYQRYHTWQLLKC
        RRL+ SPA  +E+L LE S + E      S+ +  +  +G SGGL LLW D +++ I+SYT  HIDA I+   S+ WRFTG Y HP++++   +W LLK 
Subjt:  RRLKISPAVSHENLVLECSWSGE------STNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIK-WESKIWRFTGIYSHPQAYQRYHTWQLLKC

Query:  LHNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSNRK
        LH  D   W+  GDFN  L  EE+ G VP    ++++F  +++ CGL D+ F G  FTW NR+
Subjt:  LHNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSNRK

A0A5B6U728 Reverse transcriptase1.6e-2736.36Show/hide
Query:  RRRLKISPAVSHENLVLECSWSGESTNIQSL----------------DCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASI--KWESKIWRFTGIYSHPQA
        ++R +  P   +ENL LEC W GE T+                    D KG  GGLCL WKD+  V ++S++  HID  +  + E + WRFTG Y  P  
Subjt:  RRRLKISPAVSHENLVLECSWSGESTNIQSL----------------DCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASI--KWESKIWRFTGIYSHPQA

Query:  YQRYHTWQLLKCLHNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSNRKL
         ++  +W LL+ L  Q D  W++ GDFN  +   EK+GG+P  + R+E FR+++++C L D+ + G+ FTW    L
Subjt:  YQRYHTWQLLKCLHNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSNRKL

A0A5C7IIT4 Uncharacterized protein1.9e-2848.44Show/hide
Query:  LDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIKWES-KIWRFTGIYSHPQAYQRYHTWQLLKCLHNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRI
        +D KG SGGLCLLWK EIDV + SY+ FHID  +   + K+WR TG Y HP   QR H W LL+ L       W +GGDFN  +   EK GG    +  +
Subjt:  LDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIKWES-KIWRFTGIYSHPQAYQRYHTWQLLKCLHNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRI

Query:  ENFRSMMDECGLQDLDFVGDSFTWSNRK
         NF+  +++CGL+DL F+G  FTWSNR+
Subjt:  ENFRSMMDECGLQDLDFVGDSFTWSNRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAACATCGGCGGAGGCTGAAAATCAGCCCTGCCGTGAGCCATGAAAACCTTGTGTTGGAATGTTCGTGGTCTGGGGAATCCACGAACATTCAGAGCTTGGATTG
TAAAGGCAAAAGTGGGGGTTTATGCTTGTTGTGGAAGGACGAGATTGATGTTCACATTCGCTCATACACTTTCTTTCATATCGATGCCTCCATAAAGTGGGAATCTAAAA
TTTGGCGATTTACTGGTATATACAGTCACCCTCAAGCTTATCAGAGATATCATACATGGCAACTACTCAAATGCTTGCATAATCAAGATGATTCGGCTTGGGTCATTGGG
GGTGATTTTAATGCCACATTGTTATATGAGGAGAAAGAAGGTGGAGTGCCAACTCGCGACTCTCGAATTGAGAATTTTCGTTCGATGATGGATGAATGTGGATTACAAGA
CTTAGACTTTGTGGGTGATTCCTTCACATGGTCTAATAGAAAATTGGATACAGGGAAGCGCCACCGTGAGTCGCTGCTGGTCGGAGGAGCTGTTGAGGCGCGTCTCACCG
CTATTAATACCGCAAGTGCACGAGTCGCAAGCCTGGAAATAGGACAGCGTCGCGACGCTGTGACGTCACTCAACTTGCTGGCCAAGAAATGGGACAGCGTCGCGATGCTG
TCCCCACAACGTCTCGACGCTGAGCTCGCCGGAGAGACGAGATCGCCGCCTGAAGATCGCCTGAAGCCGCGCGTGAAACCCGAACCAAGGCGCCGCCGCCTCTTGCCGTC
GCTGCTTGCTGTTGCCAGAGGGACCACGCTGCCGGAGCAAGAGGAAGAAGAGCCGCCGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAACATCGGCGGAGGCTGAAAATCAGCCCTGCCGTGAGCCATGAAAACCTTGTGTTGGAATGTTCGTGGTCTGGGGAATCCACGAACATTCAGAGCTTGGATTG
TAAAGGCAAAAGTGGGGGTTTATGCTTGTTGTGGAAGGACGAGATTGATGTTCACATTCGCTCATACACTTTCTTTCATATCGATGCCTCCATAAAGTGGGAATCTAAAA
TTTGGCGATTTACTGGTATATACAGTCACCCTCAAGCTTATCAGAGATATCATACATGGCAACTACTCAAATGCTTGCATAATCAAGATGATTCGGCTTGGGTCATTGGG
GGTGATTTTAATGCCACATTGTTATATGAGGAGAAAGAAGGTGGAGTGCCAACTCGCGACTCTCGAATTGAGAATTTTCGTTCGATGATGGATGAATGTGGATTACAAGA
CTTAGACTTTGTGGGTGATTCCTTCACATGGTCTAATAGAAAATTGGATACAGGGAAGCGCCACCGTGAGTCGCTGCTGGTCGGAGGAGCTGTTGAGGCGCGTCTCACCG
CTATTAATACCGCAAGTGCACGAGTCGCAAGCCTGGAAATAGGACAGCGTCGCGACGCTGTGACGTCACTCAACTTGCTGGCCAAGAAATGGGACAGCGTCGCGATGCTG
TCCCCACAACGTCTCGACGCTGAGCTCGCCGGAGAGACGAGATCGCCGCCTGAAGATCGCCTGAAGCCGCGCGTGAAACCCGAACCAAGGCGCCGCCGCCTCTTGCCGTC
GCTGCTTGCTGTTGCCAGAGGGACCACGCTGCCGGAGCAAGAGGAAGAAGAGCCGCCGGAATAA
Protein sequenceShow/hide protein sequence
MMKHRRRLKISPAVSHENLVLECSWSGESTNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIKWESKIWRFTGIYSHPQAYQRYHTWQLLKCLHNQDDSAWVIG
GDFNATLLYEEKEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSNRKLDTGKRHRESLLVGGAVEARLTAINTASARVASLEIGQRRDAVTSLNLLAKKWDSVAML
SPQRLDAELAGETRSPPEDRLKPRVKPEPRRRRLLPSLLAVARGTTLPEQEEEEPPE