; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026387 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026387
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationscaffold13:15325033..15329631
RNA-Seq ExpressionSpg026387
SyntenySpg026387
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030483481.1 uncharacterized protein LOC115700065 [Cannabis sativa]5.1e-1540.37Show/hide
Query:  LKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIK
        L++   SS S+    WW   W+L  P KIK F WR FH  +P A +L R H+  D  CS+C +  ES  HALF C  A+AVW       +   +V M+  
Subjt:  LKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIK

Query:  DKWLHLSTI
        D  ++LSTI
Subjt:  DKWLHLSTI

XP_030494705.1 uncharacterized protein LOC115710484 [Cannabis sativa]3.3e-1442.71Show/hide
Query:  SSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIKD
        SSS  D  +KWW  LW L  P KIKHF+WR++H  +PT+ NL+  ++    NCS C    ++  HAL  CSRAR +W   ++ D        DIKD
Subjt:  SSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIKD

XP_030502765.1 uncharacterized protein LOC115717936 [Cannabis sativa]1.3e-1335.71Show/hide
Query:  LLKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDI
        L + + ++S S +E  WWS  W++  P K++ FVW+ FH  +P A  L+R H+     C++C    ES  HALF C RA+ VW    ++ +         
Subjt:  LLKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDI

Query:  KDKWLHLSTITT
         D  LHLST+ T
Subjt:  KDKWLHLSTITT

XP_030502823.1 uncharacterized protein LOC115717993 [Cannabis sativa]3.3e-1442.34Show/hide
Query:  LKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIK
        L++  +SS S     WW  LW L  P KIK FVWR+F++ +P A  L +  V  D  CS+C++  ES  HALF C  ARAVW   N   +   S  M   
Subjt:  LKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIK

Query:  DKWLHLSTITT
        D  +HLS+I T
Subjt:  DKWLHLSTITT

XP_030508852.1 uncharacterized protein LOC115723496 [Cannabis sativa]4.3e-1437.96Show/hide
Query:  LKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIK
        L  +  S+CS+    WWS  W+L  P K++ FVW+ FH  +P A  L+R H+     C++C    E+ +HALF C RA+AVW   N S +          
Subjt:  LKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIK

Query:  DKWLHLST
        D  L LST
Subjt:  DKWLHLST

TrEMBL top hitse value%identityAlignment
A0A803NJ60 Uncharacterized protein3.8e-1632.18Show/hide
Query:  LKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIK
        L++   SS S+    WW   W+L    KIK FVW  FH  IP A +L R H+  D  C++C +  ES  H LF C  ARAVW   N       +  M+  
Subjt:  LKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIK

Query:  DKWLHLSTITTIKRQNRKGH-PGQEISQMIAQGEEYF---------MHVDVAYDLANQCCSIGVVLRNRYGQLL
        D   HLS     + + R    P  + S ++   E  +         M+VD   D  N    +G V+RN  G ++
Subjt:  DKWLHLSTITTIKRQNRKGH-PGQEISQMIAQGEEYF---------MHVDVAYDLANQCCSIGVVLRNRYGQLL

A0A803P119 Uncharacterized protein7.2e-1545.12Show/hide
Query:  LKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVW
        ++++ S S S+L  KWWS  W LN P K+K F WR  H  +P A NL++ H+  D  CS C    ES NHA F C +A+ VW
Subjt:  LKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVW

A0A803PIN0 Uncharacterized protein4.2e-1539.45Show/hide
Query:  LKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIK
        L++   SS S+    WW   W+L  P KIK F WR FH  +P A +L R H+  D  CS+C +  ES  HALF C  A+AVW       +   +  M+  
Subjt:  LKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIK

Query:  DKWLHLSTI
        D  +HLST+
Subjt:  DKWLHLSTI

A0A803PM52 Uncharacterized protein1.6e-1442.34Show/hide
Query:  LKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIK
        L++  +SS S     WW  LW L  P KIK FVWR+F++ +P A  L +  V  D  CS+C++  ES  HALF C  ARAVW   N   +   S  M   
Subjt:  LKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIK

Query:  DKWLHLSTITT
        D  +HLS+I T
Subjt:  DKWLHLSTITT

A0A803QID8 Uncharacterized protein5.5e-1541.75Show/hide
Query:  SSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIKDKWLHL
        SS S+    WW   W+L  P KIK F WR FH  +P A +L R H+  D  CS+C +  ES  HALF C  A+AVW       +   +V M+  D  ++L
Subjt:  SSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIKDKWLHL

Query:  STI
        STI
Subjt:  STI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein1.9e-0726.8Show/hide
Query:  LWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIKDKWLHLSTITTIKRQN
        +W+L+   KIKHF+WR     + T   L   ++  D  C  C    E+ +H +F+C   ++VW   NI     W      +D    L  ++  +  N
Subjt:  LWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIKDKWLHLSTITTIKRQN

AT3G09510.1 Ribonuclease H-like superfamily protein2.9e-0836.92Show/hide
Query:  SRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVW
        +R+W L    K+KHF+WR+  + + T   L    + +D +C  C++  ES NHALF C  A   W
Subjt:  SRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVW

AT3G25270.1 Ribonuclease H-like superfamily protein1.4e-0733.85Show/hide
Query:  SRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVW
        +++W+L    KIKHF+W+     + T  NL R H+     C  C +  E+  H  F C  A+ VW
Subjt:  SRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTTGAAGAATGAGGCATCCTCATCGTGTTCTGATTTGGAGCGAAAATGGTGGTCCAGACTGTGGAGATTAAATCGTCCATTGAAAATAAAGCATTTTGTCTGGAG
ATCATTTCATAAATGCATTCCAACTGCTATCAATCTGTGGCGTCACCATGTTCCGGTTGATGGGAATTGCTCGTTGTGTTACAAAGGGCCCGAATCTAAAAATCATGCTC
TTTTTCACTGTTCTAGGGCAAGGGCAGTATGGATAGGAATGAATATCAGCGATGAGGTTGGTTGGAGTGTGGATATGGATATTAAAGACAAATGGTTACACCTCAGCACT
ATCACCACTATAAAGCGGCAGAATCGCAAGGGTCATCCAGGTCAGGAAATTAGTCAGATGATTGCCCAAGGTGAGGAATATTTTATGCATGTTGATGTTGCTTACGATTT
GGCTAATCAGTGTTGTAGCATTGGTGTGGTGCTTCGTAATCGTTATGGGCAGTTGCTGTTAGCATCGCATCAGGGGTCAACAATGATAGGTGTGCAGTGGATTGTGCTAC
GATCATATGGGATATTGAGCGTCTGCGTGATTCAAAATTCCAGCAACTCCTTTGTTGATCTACGCTGGATAAAGTTCCACGAAACACCACCACAAGAGTTTCACCAATAT
TCTCTTAGAGATGACGATGAGTGGTTTGTGGGAACCAAAAATTCTAAGGGAATTGGGAAGGGAGAAAAAACTCTGGAGCTTTTCTTTGTGATTTTCTCTGGAATACCCAA
GAGAATAAGAGAGAATGGGGATTCGTCAAAAGGCCACACCAAACGTTCAACTGAGGAAGAGGAGGATCTAACGGATGTTAAGCAACCTCTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTTGAAGAATGAGGCATCCTCATCGTGTTCTGATTTGGAGCGAAAATGGTGGTCCAGACTGTGGAGATTAAATCGTCCATTGAAAATAAAGCATTTTGTCTGGAG
ATCATTTCATAAATGCATTCCAACTGCTATCAATCTGTGGCGTCACCATGTTCCGGTTGATGGGAATTGCTCGTTGTGTTACAAAGGGCCCGAATCTAAAAATCATGCTC
TTTTTCACTGTTCTAGGGCAAGGGCAGTATGGATAGGAATGAATATCAGCGATGAGGTTGGTTGGAGTGTGGATATGGATATTAAAGACAAATGGTTACACCTCAGCACT
ATCACCACTATAAAGCGGCAGAATCGCAAGGGTCATCCAGGTCAGGAAATTAGTCAGATGATTGCCCAAGGTGAGGAATATTTTATGCATGTTGATGTTGCTTACGATTT
GGCTAATCAGTGTTGTAGCATTGGTGTGGTGCTTCGTAATCGTTATGGGCAGTTGCTGTTAGCATCGCATCAGGGGTCAACAATGATAGGTGTGCAGTGGATTGTGCTAC
GATCATATGGGATATTGAGCGTCTGCGTGATTCAAAATTCCAGCAACTCCTTTGTTGATCTACGCTGGATAAAGTTCCACGAAACACCACCACAAGAGTTTCACCAATAT
TCTCTTAGAGATGACGATGAGTGGTTTGTGGGAACCAAAAATTCTAAGGGAATTGGGAAGGGAGAAAAAACTCTGGAGCTTTTCTTTGTGATTTTCTCTGGAATACCCAA
GAGAATAAGAGAGAATGGGGATTCGTCAAAAGGCCACACCAAACGTTCAACTGAGGAAGAGGAGGATCTAACGGATGTTAAGCAACCTCTTCCTTGA
Protein sequenceShow/hide protein sequence
MLLKNEASSSCSDLERKWWSRLWRLNRPLKIKHFVWRSFHKCIPTAINLWRHHVPVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEVGWSVDMDIKDKWLHLST
ITTIKRQNRKGHPGQEISQMIAQGEEYFMHVDVAYDLANQCCSIGVVLRNRYGQLLLASHQGSTMIGVQWIVLRSYGILSVCVIQNSSNSFVDLRWIKFHETPPQEFHQY
SLRDDDEWFVGTKNSKGIGKGEKTLELFFVIFSGIPKRIRENGDSSKGHTKRSTEEEEDLTDVKQPLP