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Spg026406 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026406
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionsomething about silencing protein 10
Genome locationscaffold13:15088079..15094631
RNA-Seq ExpressionSpg026406
SyntenySpg026406
Gene Ontology termsNA
InterPro domainsIPR007146 - Sas10/Utp3/C1D


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592973.1 Something about silencing protein 10, partial [Cucurbita argyrosperma subsp. sororia]1.5e-7369.26Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV
        MGKRKSHKQ+KRNSKRR ADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE            G  +   +E              
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV

Query:  DDDDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLF--GVEGK---ANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLED
        +D+DDD++D+ DTGFAAKIARQQKFLREKFGGV+DEMHEDEDEDMEE++    G +GK   A+     I   +DDESLAEEEEEVIRLQKEKAKTFSLED
Subjt:  DDDDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLF--GVEGK---ANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLED

Query:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
        FG++D+SDRELTLEEISA+G+D KTS R+EA +DM+ATYQEI K
Subjt:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
XP_022960128.1 something about silencing protein 10 [Cucurbita moschata]6.3e-7569.67Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV
        MGKRKSHKQ+KRNSKRR ADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE            G  +   +E              
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV

Query:  DDDDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLF--GVEGK---ANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLED
        +D+DDD++D+ DTGFAAKIARQQKFLREKFGGV+DEMHEDEDEDMEE++    G +GK   A+     I   +DDESLAEEEEEVIRLQKEKAKTFSLED
Subjt:  DDDDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLF--GVEGK---ANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLED

Query:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
        FG++D+SDRELTLEEISA+G+D KTS R+EAP+DM+ATYQEI K
Subjt:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
XP_023004169.1 something about silencing protein 10 [Cucurbita maxima]6.9e-7469.26Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV
        MGKRKSHKQ+KRNSKRR ADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNL                E V++E              
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV

Query:  DDDDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLF--GVEGK---ANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLED
        +D+DDD++D+ DTGFAAKIARQQKFLREKFGGV+DEMHEDEDEDMEE++    G +GK   A+     I   +DDESLAEEEEEVIRLQKEKAKTFSLED
Subjt:  DDDDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLF--GVEGK---ANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLED

Query:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
        FG++D+SDRELTLEEISA+G+D KTS R+EAP+D +ATYQEI K
Subjt:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
XP_023515008.1 something about silencing protein 10 isoform X1 [Cucurbita pepo subsp. pepo]1.6e-7570.08Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV
        MGKRKSHKQ+KRNSKRR ADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE  V  ++   +    E  +E+              
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV

Query:  DDDDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLF--GVEGK---ANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLED
        +D+DDD++D+ DTGFAAKIARQQKFLREKFGGV+DEMHEDEDEDMEE++    G +GK   A+     I   +DDESLAEEEEEVIRLQKEKAKTFSLED
Subjt:  DDDDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLF--GVEGK---ANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLED

Query:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
        FG++D+SDRELTLEEISA+G+D KTS R+EAP+DM+ATYQEI K
Subjt:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
XP_023515010.1 something about silencing protein 10 isoform X2 [Cucurbita pepo subsp. pepo]1.1e-7469.67Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV
        MGKRKSHKQ+KRNSKRR ADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE            G  +   +E              
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV

Query:  DDDDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLF--GVEGK---ANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLED
        +D+DDD++D+ DTGFAAKIARQQKFLREKFGGV+DEMHEDEDEDMEE++    G +GK   A+     I   +DDESLAEEEEEVIRLQKEKAKTFSLED
Subjt:  DDDDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLF--GVEGK---ANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLED

Query:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
        FG++D+SDRELTLEEISA+G+D KTS R+EAP+DM+ATYQEI K
Subjt:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
TrEMBL top hitse value%identityAlignment
A0A1S3CBM7 something about silencing protein 10 isoform X21.7e-7066.8Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV
        MGKRKS+KQDK+NSKRR A+DDAASEDMDDEIDAFHRQRDVIPLDINGD+ ESD+DAE PVFNLE                                 G+
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV

Query:  DD-DDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLFGVEGKANTMML----IILILNDDESLAEEEEEVIRLQKEKAKTFSLED
        DD D++D++D+ DTG AAKIARQQKFLREKFGGVEDEMHEDEDEDMEE++      K+           +  +DDESLAEEEEEVIRLQKEKAKTFSLED
Subjt:  DD-DDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLFGVEGKANTMML----IILILNDDESLAEEEEEVIRLQKEKAKTFSLED

Query:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
        FGLED+ DRELTLEEI+A+GVDAKTSAR EA +DMDATYQEITK
Subjt:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
A0A1S3CCS3 something about silencing protein 10 isoform X11.7e-7066.8Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV
        MGKRKS+KQDK+NSKRR A+DDAASEDMDDEIDAFHRQRDVIPLDINGD+ ESD+DAE PVFNLE                                 G+
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV

Query:  DD-DDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLFGVEGKANTMML----IILILNDDESLAEEEEEVIRLQKEKAKTFSLED
        DD D++D++D+ DTG AAKIARQQKFLREKFGGVEDEMHEDEDEDMEE++      K+           +  +DDESLAEEEEEVIRLQKEKAKTFSLED
Subjt:  DD-DDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLFGVEGKANTMML----IILILNDDESLAEEEEEVIRLQKEKAKTFSLED

Query:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
        FGLED+ DRELTLEEI+A+GVDAKTSAR EA +DMDATYQEITK
Subjt:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
A0A5D3DMP9 Something about silencing protein 10 isoform X16.3e-7367.21Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCY---FRC
        MGKRKS+KQ+K+NSKRR A+DDAASEDMDDEIDAFHRQRDVIPLDINGD+ ESD+DAE PVFNLE+   +  H  N   + + +E + + L         
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCY---FRC

Query:  QGVDD-DDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLFGVEGKANTMML----IILILNDDESLAEEEEEVIRLQKEKAKTFS
         G+DD D++D++D+ DTG AAKIARQQKFLREKFGGVEDEMHEDEDEDMEE++      K+           +  +DDESLAEEEEEVIRLQKEKAKTFS
Subjt:  QGVDD-DDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLFGVEGKANTMML----IILILNDDESLAEEEEEVIRLQKEKAKTFS

Query:  LEDFGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
        LEDFGLED+ DRELTLEEI+A+GVDAKTSAR EA +DMDATYQEITK
Subjt:  LEDFGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
A0A6J1H7Y4 something about silencing protein 103.0e-7569.67Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV
        MGKRKSHKQ+KRNSKRR ADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLE            G  +   +E              
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV

Query:  DDDDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLF--GVEGK---ANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLED
        +D+DDD++D+ DTGFAAKIARQQKFLREKFGGV+DEMHEDEDEDMEE++    G +GK   A+     I   +DDESLAEEEEEVIRLQKEKAKTFSLED
Subjt:  DDDDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLF--GVEGK---ANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLED

Query:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
        FG++D+SDRELTLEEISA+G+D KTS R+EAP+DM+ATYQEI K
Subjt:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
A0A6J1KVH0 something about silencing protein 103.4e-7469.26Show/hide
Query:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV
        MGKRKSHKQ+KRNSKRR ADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNL                E V++E              
Subjt:  MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGV

Query:  DDDDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLF--GVEGK---ANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLED
        +D+DDD++D+ DTGFAAKIARQQKFLREKFGGV+DEMHEDEDEDMEE++    G +GK   A+     I   +DDESLAEEEEEVIRLQKEKAKTFSLED
Subjt:  DDDDDDDQDVHDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLF--GVEGK---ANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLED

Query:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
        FG++D+SDRELTLEEISA+G+D KTS R+EAP+D +ATYQEI K
Subjt:  FGLEDDSDRELTLEEISARGVDAKTSARDEAPEDMDATYQEITK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G43650.1 Sas10/U3 ribonucleoprotein (Utp) family protein1.1e-2938.93Show/hide
Query:  KRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGVDDDDDDDQDV
        KR+SK      D   +  DDEIDAFH+QRD++PLD+N D  ESDED   PVF+L                                 QGVDD+ ++D+D 
Subjt:  KRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGVDDDDDDDQDV

Query:  HD-----TGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKR-----LFGVEGKANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLEDFGLED
         D      G  AK+ RQ+K+LR KFG  +DEM +D+ +  E+KR       G+    + +   IL  +DDE +  EEEEVIRL+ E+  + +  D GL+D
Subjt:  HD-----TGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKR-----LFGVEGKANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLEDFGLED

Query:  ----DSDRELTLEEISARGVDAKTSARDEAPE-DMDATYQEITK
            DSDRELT+EEIS +G  A  S  D+  + D D   +EI K
Subjt:  ----DSDRELTLEEISARGVDAKTSARDEAPE-DMDATYQEITK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAAGAGAAAGAGCCATAAGCAAGACAAGAGGAACTCTAAGAGAAGAAATGCCGATGATGATGCTGCCTCTGAAGATATGGATGATGAAATTGATGCATTTCACAG
GCAGAGGGATGTTATTCCACTTGATATTAACGGTGACGCTCCAGAGTCAGATGAAGATGCTGAGCATCCTGTCTTTAATTTAGAGGTGAAAGTCCCGATTAAGGAACATG
GTGCTAATTATGGGTATATGGAGATGGTTAATGAGGAATCTTCCCTCATTCTGTTTTGTTACTTTAGATGCCAAGGCGTTGATGATGACGACGACGACGATCAAGATGTC
CATGATACTGGTTTTGCCGCAAAAATTGCTAGGCAACAGAAGTTCTTGCGGGAAAAGTTTGGTGGAGTGGAAGATGAAATGCACGAGGATGAAGATGAAGACATGGAAGA
AAAAAGACTGTTTGGGGTGGAAGGAAAAGCAAATACTATGATGCTGATAATCTTGATTTTGAATGATGATGAGTCCCTTGCAGAAGAGGAGGAAGAGGTCATTAGATTGC
AGAAGGAGAAAGCAAAAACTTTCTCACTGGAAGATTTTGGCCTTGAAGATGATAGTGATAGGGAATTAACTCTAGAGGAAATATCTGCAAGAGGAGTTGATGCAAAAACT
TCAGCAAGAGATGAAGCTCCCGAGGATATGGATGCTACATATCAAGAGATTACAAAGACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAAGAGAAAGAGCCATAAGCAAGACAAGAGGAACTCTAAGAGAAGAAATGCCGATGATGATGCTGCCTCTGAAGATATGGATGATGAAATTGATGCATTTCACAG
GCAGAGGGATGTTATTCCACTTGATATTAACGGTGACGCTCCAGAGTCAGATGAAGATGCTGAGCATCCTGTCTTTAATTTAGAGGTGAAAGTCCCGATTAAGGAACATG
GTGCTAATTATGGGTATATGGAGATGGTTAATGAGGAATCTTCCCTCATTCTGTTTTGTTACTTTAGATGCCAAGGCGTTGATGATGACGACGACGACGATCAAGATGTC
CATGATACTGGTTTTGCCGCAAAAATTGCTAGGCAACAGAAGTTCTTGCGGGAAAAGTTTGGTGGAGTGGAAGATGAAATGCACGAGGATGAAGATGAAGACATGGAAGA
AAAAAGACTGTTTGGGGTGGAAGGAAAAGCAAATACTATGATGCTGATAATCTTGATTTTGAATGATGATGAGTCCCTTGCAGAAGAGGAGGAAGAGGTCATTAGATTGC
AGAAGGAGAAAGCAAAAACTTTCTCACTGGAAGATTTTGGCCTTGAAGATGATAGTGATAGGGAATTAACTCTAGAGGAAATATCTGCAAGAGGAGTTGATGCAAAAACT
TCAGCAAGAGATGAAGCTCCCGAGGATATGGATGCTACATATCAAGAGATTACAAAGACGTGA
Protein sequenceShow/hide protein sequence
MGKRKSHKQDKRNSKRRNADDDAASEDMDDEIDAFHRQRDVIPLDINGDAPESDEDAEHPVFNLEVKVPIKEHGANYGYMEMVNEESSLILFCYFRCQGVDDDDDDDQDV
HDTGFAAKIARQQKFLREKFGGVEDEMHEDEDEDMEEKRLFGVEGKANTMMLIILILNDDESLAEEEEEVIRLQKEKAKTFSLEDFGLEDDSDRELTLEEISARGVDAKT
SARDEAPEDMDATYQEITKT