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Spg026412 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026412
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold13:19142363..19143909
RNA-Seq ExpressionSpg026412
SyntenySpg026412
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A5D3BSA6 Retrotrans_gag domain-containing protein3.3e-0443.02Show/hide
Query:  PRGNRPSLQARELAKTVI----SQTELCQG------------CTPCSAIQQGQHVS----LEEDDVCWLHAISMTKLAGSLGGGVT
        PRGNR SLQ  EL KTVI    + T LC                P SA   G +      + EDDVCWLH +   K AG  GGGVT
Subjt:  PRGNRPSLQARELAKTVI----SQTELCQG------------CTPCSAIQQGQHVS----LEEDDVCWLHAISMTKLAGSLGGGVT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTGTGTTCGGGGGATTTCTGGACCAATCCATTGGGAATCTCACATTCATTCCTTCCGGCCAAGAGGAAATAGGCCGAGTCTACAGGCCAGGGAACTAGCCAAGAC
TGTTATTTCCCAAACGGAGTTATGTCAGGGTTGCACCCCATGTTCAGCGATTCAGCAGGGTCAACATGTATCGTTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCT
CCATGACTAAGCTAGCAGGTAGTTTGGGAGGGGGTGTGACACGTCGGGTTAGCGCTCTAGGGGTATCTTGGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTGTGTTCGGGGGATTTCTGGACCAATCCATTGGGAATCTCACATTCATTCCTTCCGGCCAAGAGGAAATAGGCCGAGTCTACAGGCCAGGGAACTAGCCAAGAC
TGTTATTTCCCAAACGGAGTTATGTCAGGGTTGCACCCCATGTTCAGCGATTCAGCAGGGTCAACATGTATCGTTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCT
CCATGACTAAGCTAGCAGGTAGTTTGGGAGGGGGTGTGACACGTCGGGTTAGCGCTCTAGGGGTATCTTGGTCTTAA
Protein sequenceShow/hide protein sequence
MFCVRGISGPIHWESHIHSFRPRGNRPSLQARELAKTVISQTELCQGCTPCSAIQQGQHVSLEEDDVCWLHAISMTKLAGSLGGGVTRRVSALGVSWS