; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026424 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026424
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold13:16920922..16927347
RNA-Seq ExpressionSpg026424
SyntenySpg026424
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047672.1 uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa]1.3e-2845.31Show/hide
Query:  PASSSETVAS-PGDLSSFSIKDLFLVKPKVVEDEKCSPVLRYVPLSRRKKGESPFTECPKSIKK---KLLKEGYSL---PTTRKGLGYKSPEPVRITRKG
        P  S+ET  S   + S+ + K + L+     E+    P+LRYVPLSR KKGESPF E P+ +K    ++LKE +++     T+KGLGYKSPEP+RITRKG
Subjt:  PASSSETVAS-PGDLSSFSIKDLFLVKPKVVEDEKCSPVLRYVPLSRRKKGESPFTECPKSIKK---KLLKEGYSL---PTTRKGLGYKSPEPVRITRKG

Query:  KAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGREESTLSTPDITLLP
        K KV D NHITV+EVD  + +E   QR S F RI P VARA VF+R+ + E + +  Q T++  R S F+RL++   +EE  +    +T  P
Subjt:  KAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGREESTLSTPDITLLP

KAA0055957.1 uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa]1.2e-2940.17Show/hide
Query:  KPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------------------------------------------KKLLKEGYSLPTTRKGLG
        K  ++ DEK S  P+LRYVPLSRRKKGESPF E P+ +K                                           KKLL+EG+ +P +RKGLG
Subjt:  KPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------------------------------------------KKLLKEGYSLPTTRKGLG

Query:  YKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGREESTLSTP-
        YKSPEP+RITRKGK KV D NHITV+EVD  +E+E  +QR S F RI P VARA VF+R+ + E + +  Q T++  R S F+RL++    E+    T  
Subjt:  YKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGREESTLSTP-

Query:  ----------DITLLPREETKKSSLLRRL
                   IT     +T ++ ++ RL
Subjt:  ----------DITLLPREETKKSSLLRRL

TYK28162.1 uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa]1.3e-2838.49Show/hide
Query:  KPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-----------------------------------------------------KKLLKEGY
        K  ++ DEK S  P+LRYVPLSRRKKGESPF E P+ +K                                                     KKLL+EG+
Subjt:  KPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-----------------------------------------------------KKLLKEGY

Query:  SLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIG
         +P +RKGLGYKSPEP+RITRKGK KV D NHITV+EVD  +E+E  +QR S F RI P VARA VF+R+ + E E +  Q T++  + S F+RL++   
Subjt:  SLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIG

Query:  REESTLSTP-----------DITLLPREETKKSSLLRRL
         E+    T             IT     +T ++ ++ RL
Subjt:  REESTLSTP-----------DITLLPREETKKSSLLRRL

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.3e-2840.61Show/hide
Query:  KPKVVEDEKC--SPVLRYVPLSRRKKGESPFTECPKSIK-------------------------------------------------------------
        K  +++DE    +PVLRYVPLSRRKKGESPF E PK +K                                                             
Subjt:  KPKVVEDEKC--SPVLRYVPLSRRKKGESPFTECPKSIK-------------------------------------------------------------

Query:  ----------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETE
                        KKLL+EG+S+P +RKGLGYKSPEP+RIT+KGK KV DINHIT+EE D++  +E  +QR SVF RIRP VAR  VF+R+ + E E
Subjt:  ----------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETE

Query:  EESAQPTNSSTRSSVFRRLSMFIGREEST
         E  Q   S  R SVFRRL+    +EEST
Subjt:  EESAQPTNSSTRSSVFRRLSMFIGREEST

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.9e-1152.22Show/hide
Query:  AVANRISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNEK
        A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+Q  +
Subjt:  AVANRISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNEK

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.2e-0532.73Show/hide
Query:  KSKSKVTHGNSPRLFRDSKRNVKSQRKKGKKKSRRSKPVVEKSEDFFCPPPPITLAEYFPRRFLDDSQGEALEIVTCHIVDMVEDDDVPASSSETVASPG
        K +  +      R +++ +R  K+Q+ K KKK+ + K V  +  +F  P   +TLA++ P+ FL D Q E  E+V CH ++  E++ +P  S E      
Subjt:  KSKSKVTHGNSPRLFRDSKRNVKSQRKKGKKKSRRSKPVVEKSEDFFCPPPPITLAEYFPRRFLDDSQGEALEIVTCHIVDMVEDDDVPASSSETVASPG

Query:  DLSSFSIKDL
        DLS F+++DL
Subjt:  DLSSFSIKDL

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.3e-2848.48Show/hide
Query:  KPKVVEDEKCSP--VLRYVPLSRRKKGESPFTECPKSIK-------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVEEVDD
        K  ++ DEK S   +LRYVPLSRR+KGESPF + P+ +K             KKLL+EG+ +P +RKG GYKSPEP+ I RK K KV D NHITV EVD 
Subjt:  KPKVVEDEKCSP--VLRYVPLSRRKKGESPFTECPKSIK-------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVEEVDD

Query:  SKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGREEST
         +E+E   QR S F +IRP V R +VF+R+ V +TE +  Q T+S  + S  +RL+M   +E+ T
Subjt:  SKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGREEST

TrEMBL top hitse value%identityAlignment
A0A5A7TPR5 RNase H domain-containing protein6.5e-2948.48Show/hide
Query:  KPKVVEDEKCSP--VLRYVPLSRRKKGESPFTECPKSIK-------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVEEVDD
        K  ++ DEK S   +LRYVPLSRR+KGESPF + P+ +K             KKLL+EG+ +P +RKG GYKSPEP+ I RK K KV D NHITV EVD 
Subjt:  KPKVVEDEKCSP--VLRYVPLSRRKKGESPFTECPKSIK-------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVEEVDD

Query:  SKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGREEST
         +E+E   QR S F +IRP V R +VF+R+ V +TE +  Q T+S  + S  +RL+M   +E+ T
Subjt:  SKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGREEST

A0A5A7UMY2 Reverse transcriptase domain-containing protein5.9e-3040.17Show/hide
Query:  KPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------------------------------------------KKLLKEGYSLPTTRKGLG
        K  ++ DEK S  P+LRYVPLSRRKKGESPF E P+ +K                                           KKLL+EG+ +P +RKGLG
Subjt:  KPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------------------------------------------KKLLKEGYSLPTTRKGLG

Query:  YKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGREESTLSTP-
        YKSPEP+RITRKGK KV D NHITV+EVD  +E+E  +QR S F RI P VARA VF+R+ + E + +  Q T++  R S F+RL++    E+    T  
Subjt:  YKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGREESTLSTP-

Query:  ----------DITLLPREETKKSSLLRRL
                   IT     +T ++ ++ RL
Subjt:  ----------DITLLPREETKKSSLLRRL

A0A5D3BY54 Ty3-gypsy retrotransposon protein8.0e-2735.64Show/hide
Query:  EIVTCHIVDMVEDDDV---PASSSETVASPGDL-SSFSIKDLFLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK----------------
        E+V+  +  + ++D++     +S E+  S G   S  S       K  +V DEK S  P+LRYVPLSRRKKGESPF E P+ +K                
Subjt:  EIVTCHIVDMVEDDDV---PASSSETVASPGDL-SSFSIKDLFLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK----------------

Query:  -------------------------------------------------------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKAKVADIN
                                                                     KKLL+EG+++P +RKGLGYK PEP+RITRKGK KV D N
Subjt:  -------------------------------------------------------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKAKVADIN

Query:  HITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGREESTL
        HITV+EVD  +E+E   QR S F R+ P VARA VF+R+ + E E +  Q T+S  R S F+RL+M    E+ +L
Subjt:  HITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGREESTL

A0A5D3BY54 Ty3-gypsy retrotransposon protein1.0e-1048.31Show/hide
Query:  VANRISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNEK
        VA  I K + ES K  + +K+NPL+++   +S + K   +PDVMSVMMAD+  +  MAEMERK+N LMKAV+ERD EI  L+ Q++  +
Subjt:  VANRISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNEK

A0A5D3C8N8 Ribonuclease H6.5e-2945.31Show/hide
Query:  PASSSETVAS-PGDLSSFSIKDLFLVKPKVVEDEKCSPVLRYVPLSRRKKGESPFTECPKSIKK---KLLKEGYSL---PTTRKGLGYKSPEPVRITRKG
        P  S+ET  S   + S+ + K + L+     E+    P+LRYVPLSR KKGESPF E P+ +K    ++LKE +++     T+KGLGYKSPEP+RITRKG
Subjt:  PASSSETVAS-PGDLSSFSIKDLFLVKPKVVEDEKCSPVLRYVPLSRRKKGESPFTECPKSIKK---KLLKEGYSL---PTTRKGLGYKSPEPVRITRKG

Query:  KAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGREESTLSTPDITLLP
        K KV D NHITV+EVD  + +E   QR S F RI P VARA VF+R+ + E + +  Q T++  R S F+RL++   +EE  +    +T  P
Subjt:  KAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGREESTLSTPDITLLP

A0A5D3DXC7 Reverse transcriptase domain-containing protein6.5e-2938.49Show/hide
Query:  KPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-----------------------------------------------------KKLLKEGY
        K  ++ DEK S  P+LRYVPLSRRKKGESPF E P+ +K                                                     KKLL+EG+
Subjt:  KPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-----------------------------------------------------KKLLKEGY

Query:  SLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIG
         +P +RKGLGYKSPEP+RITRKGK KV D NHITV+EVD  +E+E  +QR S F RI P VARA VF+R+ + E E +  Q T++  + S F+RL++   
Subjt:  SLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIG

Query:  REESTLSTP-----------DITLLPREETKKSSLLRRL
         E+    T             IT     +T ++ ++ RL
Subjt:  REESTLSTP-----------DITLLPREETKKSSLLRRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGACGAACTGTTCGTTGAGGAGCAATGTGCTGAGACGTTCTTGGGCTTCAACAAGCGTGCGGTTGCATCTGGGTCGTGGGCCGTTAATGAACGTGAACGTGGGTC
AGTTGGTTTCTTCGTGGGCCATTGTAGCGTGCGGTTTCATTCAACGGTTGTGGTCGGTCTGGTCTGGGCAGTTGAGGCATGGGAGGATCATACTCCTCTTGCTGTTGCAA
ACAGGATCTCAAAGCTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAACCCGCTGTTCGAATCTGTCGTTCCAACATCTAAGCAGCCAAAGGATGCACTA
AATCCTGATGTGATGTCTGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAATCTCTTGATGAAGGCAGTTGATGAAAGAGATCT
GGAGATTGCCTATTTGAAGAACCAGCTGCAAAACGAGAAACGGCTGAGTCTAGCCAGACCCCTGATGAGAACGAAGGCTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAA
GCAAAGTTACGCACGGAAACAGTCCCCGCCTATTTCGAGATAGTAAAAGAAATGTTAAGTCTCAAAGGAAGAAGGGAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCGTG
GAGAAAAGTGAAGATTTCTTTTGCCCTCCACCACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAAGCACTTGAAATCGTCACGTG
TCACATTGTGGACATGGTGGAAGATGATGATGTCCCTGCTAGTTCCTCGGAAACGGTGGCAAGTCCAGGAGACTTATCCTCCTTCAGCATAAAGGACTTATTCCTTGTGA
AACCTAAAGTTGTAGAGGATGAGAAGTGTTCACCTGTCCTACGATACGTCCCTTTATCCCGGCGTAAAAAGGGTGAATCACCTTTCACTGAATGTCCAAAAAGCATAAAG
AAGAAACTTCTAAAGGAAGGCTATAGTCTGCCTACGACGAGAAAAGGACTTGGATATAAGTCGCCCGAGCCAGTTCGCATAACAAGAAAAGGGAAGGCGAAAGTGGCAGA
CATAAACCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAGAAGAGAGCATCGACCAACGAGCTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTCAG
TCTTTCAGAGGATAATTGTGAATGAAACAGAGGAAGAAAGTGCACAACCTACCAATAGCTCCACTCGATCTTCAGTTTTTCGAAGGTTAAGTATGTTCATTGGGAGAGAA
GAGAGTACACTTTCAACTCCGGATATCACGCTGTTACCACGAGAAGAGACAAAAAAGAGCAGTCTGCTTCGTCGACTTCTCACCGACTTCAATATGAAGATGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGACGAACTGTTCGTTGAGGAGCAATGTGCTGAGACGTTCTTGGGCTTCAACAAGCGTGCGGTTGCATCTGGGTCGTGGGCCGTTAATGAACGTGAACGTGGGTC
AGTTGGTTTCTTCGTGGGCCATTGTAGCGTGCGGTTTCATTCAACGGTTGTGGTCGGTCTGGTCTGGGCAGTTGAGGCATGGGAGGATCATACTCCTCTTGCTGTTGCAA
ACAGGATCTCAAAGCTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAACCCGCTGTTCGAATCTGTCGTTCCAACATCTAAGCAGCCAAAGGATGCACTA
AATCCTGATGTGATGTCTGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAATCTCTTGATGAAGGCAGTTGATGAAAGAGATCT
GGAGATTGCCTATTTGAAGAACCAGCTGCAAAACGAGAAACGGCTGAGTCTAGCCAGACCCCTGATGAGAACGAAGGCTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAA
GCAAAGTTACGCACGGAAACAGTCCCCGCCTATTTCGAGATAGTAAAAGAAATGTTAAGTCTCAAAGGAAGAAGGGAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCGTG
GAGAAAAGTGAAGATTTCTTTTGCCCTCCACCACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAAGCACTTGAAATCGTCACGTG
TCACATTGTGGACATGGTGGAAGATGATGATGTCCCTGCTAGTTCCTCGGAAACGGTGGCAAGTCCAGGAGACTTATCCTCCTTCAGCATAAAGGACTTATTCCTTGTGA
AACCTAAAGTTGTAGAGGATGAGAAGTGTTCACCTGTCCTACGATACGTCCCTTTATCCCGGCGTAAAAAGGGTGAATCACCTTTCACTGAATGTCCAAAAAGCATAAAG
AAGAAACTTCTAAAGGAAGGCTATAGTCTGCCTACGACGAGAAAAGGACTTGGATATAAGTCGCCCGAGCCAGTTCGCATAACAAGAAAAGGGAAGGCGAAAGTGGCAGA
CATAAACCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAGAAGAGAGCATCGACCAACGAGCTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTCAG
TCTTTCAGAGGATAATTGTGAATGAAACAGAGGAAGAAAGTGCACAACCTACCAATAGCTCCACTCGATCTTCAGTTTTTCGAAGGTTAAGTATGTTCATTGGGAGAGAA
GAGAGTACACTTTCAACTCCGGATATCACGCTGTTACCACGAGAAGAGACAAAAAAGAGCAGTCTGCTTCGTCGACTTCTCACCGACTTCAATATGAAGATGCAATGA
Protein sequenceShow/hide protein sequence
MVDELFVEEQCAETFLGFNKRAVASGSWAVNERERGSVGFFVGHCSVRFHSTVVVGLVWAVEAWEDHTPLAVANRISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDAL
NPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNEKRLSLARPLMRTKAGPLSFVAKSKSKVTHGNSPRLFRDSKRNVKSQRKKGKKKSRRSKPVV
EKSEDFFCPPPPITLAEYFPRRFLDDSQGEALEIVTCHIVDMVEDDDVPASSSETVASPGDLSSFSIKDLFLVKPKVVEDEKCSPVLRYVPLSRRKKGESPFTECPKSIK
KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESIDQRASVFRRIRPPVARASVFQRIIVNETEEESAQPTNSSTRSSVFRRLSMFIGRE
ESTLSTPDITLLPREETKKSSLLRRLLTDFNMKMQ