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Spg026435 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026435
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNucleolar protein 58-like
Genome locationscaffold13:19301179..19302574
RNA-Seq ExpressionSpg026435
SyntenySpg026435
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049837.1 hypothetical protein E6C27_scaffold1591G00330 [Cucumis melo var. makuwa]2.4e-0629.75Show/hide
Query:  KNLFPEVFKDINFQEKMEIMRKRDFLNEKEFSNRAGTLQDFETVVPLVREFYAGLREESMSMAV---VRDKMLKEALKMVANKGVQWKESQTKVKTLVPS
        K +FP    D    + +++  KR    E+ ++   G + DF   +  + E + GL    +  A+   ++++ L++ LK +A    +W    T+V +L P 
Subjt:  KNLFPEVFKDINFQEKMEIMRKRDFLNEKEFSNRAGTLQDFETVVPLVREFYAGLREESMSMAV---VRDKMLKEALKMVANKGVQWKESQTKVKTLVPS

Query:  DLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMKGL---------ERVKIVLG
        +L  E  +WL F+K ++MP  HD+TIS+ER++L+Y+IM+ L         E +K+ LG
Subjt:  DLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMKGL---------ERVKIVLG

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]4.0e-0639.58Show/hide
Query:  LVREFYAGLREESMSMAVVRDKM------LKEALKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMK
        +V+ FY G  +     A+V+++       ++EAL+ VA    +W  +  K   L   +L  E +VWL FIK +LMP  HD+TIS ER+MLLY IM+
Subjt:  LVREFYAGLREESMSMAVVRDKM------LKEALKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMK

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.4e-0639.51Show/hide
Query:  EESMSMAVVRDKMLKEALKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMKG
        E S  +  + +  L   L+ VA  G +W  S     T + S L P   VW HF+K+RL+P TH  T+S ERV+LLY+++ G
Subjt:  EESMSMAVVRDKMLKEALKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMKG

TYG52543.1 hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]2.4e-0638.32Show/hide
Query:  LVREFYAGLREESMSMAVVRDK------MLKEALKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIM--KGL
        LVREFYA L  +  +  +VR K       L++ L +V N G QW        +     LKP   VW +F++   MPI+H STIS+E ++LLY I+  K +
Subjt:  LVREFYAGLREESMSMAVVRDK------MLKEALKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIM--KGL

Query:  ERVKIVL
           KI+L
Subjt:  ERVKIVL

XP_031266005.1 uncharacterized protein LOC116124425, partial [Pistacia vera]6.9e-0637.76Show/hide
Query:  TVVPLVREFYAGLREESMSMAVVRDKMLKEA------LKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNI
        TV PLVREFYA L E       V+ +  +        L ++A  G  W  S+ + KTL  + L P   +W ++I  RLMP +H ST++ E+ +LLY+I
Subjt:  TVVPLVREFYAGLREESMSMAVVRDKMLKEA------LKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNI

TrEMBL top hitse value%identityAlignment
A0A2P5BNT0 Uncharacterized protein (Fragment)4.3e-0638.27Show/hide
Query:  EESMSMAVVRDKMLKEALKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMKG
        E S  +  + +  L   L+ VA  G +W  S   V T + S L P   +W HF+K+RL+P TH   +S ERV+LLY+++ G
Subjt:  EESMSMAVVRDKMLKEALKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMKG

A0A2P5CPE8 Uncharacterized protein6.7e-0739.51Show/hide
Query:  EESMSMAVVRDKMLKEALKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMKG
        E S  +  + +  L   L+ VA  G +W  S     T + S L P   VW HF+K+RL+P TH  T+S ERV+LLY+++ G
Subjt:  EESMSMAVVRDKMLKEALKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMKG

A0A5A7U670 Uncharacterized protein1.1e-0629.75Show/hide
Query:  KNLFPEVFKDINFQEKMEIMRKRDFLNEKEFSNRAGTLQDFETVVPLVREFYAGLREESMSMAV---VRDKMLKEALKMVANKGVQWKESQTKVKTLVPS
        K +FP    D    + +++  KR    E+ ++   G + DF   +  + E + GL    +  A+   ++++ L++ LK +A    +W    T+V +L P 
Subjt:  KNLFPEVFKDINFQEKMEIMRKRDFLNEKEFSNRAGTLQDFETVVPLVREFYAGLREESMSMAV---VRDKMLKEALKMVANKGVQWKESQTKVKTLVPS

Query:  DLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMKGL---------ERVKIVLG
        +L  E  +WL F+K ++MP  HD+TIS+ER++L+Y+IM+ L         E +K+ LG
Subjt:  DLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMKGL---------ERVKIVLG

A0A5D2B8V0 Uncharacterized protein1.1e-0638.32Show/hide
Query:  LVREFYAGLREESMSMAVVRDK------MLKEALKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIM--KGL
        LVREFYA L  +  +  +VR K       L++ L +V N G QW        +     LKP   VW +F++   MPI+H STIS+E ++LLY I+  K +
Subjt:  LVREFYAGLREESMSMAVVRDK------MLKEALKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIM--KGL

Query:  ERVKIVL
           KI+L
Subjt:  ERVKIVL

A0A5D3DVQ6 Uncharacterized protein1.9e-0639.58Show/hide
Query:  LVREFYAGLREESMSMAVVRDKM------LKEALKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMK
        +V+ FY G  +     A+V+++       ++EAL+ VA    +W  +  K   L   +L  E +VWL FIK +LMP  HD+TIS ER+MLLY IM+
Subjt:  LVREFYAGLREESMSMAVVRDKM------LKEALKMVANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTGAACAACTGCAAGAAGTTGAAGAAGATGCCCTTCAAGGCCATTGAAAATCGACAAGCTGATGAGGCTATTGCTCCGTTGTTCGAATATGATGTTAGAGGACC
TCCACCAGCTGCTGATAGCACCTCTTCAGGAGAGAAAAAGAATGAAGAGGGAATTGAAGAAGAAGAGGTCGAGACCTCTAGTGATAGCAAAACAGAAACAAATTCTGAAA
TTGAGGAATTGGACGATGATCAAGTAACAATTTCTACAGCTTTGAGGAAGAAAATAAGAAGAGAATTGAAAGCCGAGAGGAGGACAAAGAATAAGAATGACCCTATTTTT
GCCAAGGGGCCAAGGGCAAGGTCCATGGACGCCTCTCCTGCACCTTCGACAACCTCCACACTTGTCAAAGCAAAGACCAAATTGCCTAAGGCTCCAACACCAAAGAATCT
GTTCCCTGAAGTCTTCAAGGATATTAATTTCCAAGAGAAGATGGAGATTATGAGGAAAAGAGACTTCCTGAACGAGAAGGAATTCTCAAACAGAGCAGGAACTTTGCAAG
ATTTTGAGACCGTGGTGCCTCTAGTTCGAGAGTTTTATGCTGGTTTGAGGGAAGAGAGCATGAGCATGGCGGTGGTGAGAGATAAGATGTTGAAAGAAGCATTGAAAATG
GTGGCCAACAAGGGAGTTCAATGGAAGGAGTCTCAAACAAAGGTTAAGACACTAGTGCCAAGTGATCTCAAGCCAGAACCGGCAGTGTGGCTTCACTTCATCAAGAATAG
ACTGATGCCCATAACCCACGACAGTACTATTTCAGTAGAGAGGGTGATGCTTCTCTACAACATCATGAAAGGGTTGGAGAGAGTGAAGATAGTTCTGGGAAAAGATGAGG
AACATCACTTTTTCAGACCCACCATTGACTTACCTCTGATTGGGAAGCTCCAACAGAACAACGCTCAAAGGAAGGACAAGGCTTCCACATCCCACGCTACTCCATCCACG
GGGTTGAATCCTGTTTCACCTCCTCAGCACACTCCTATTTCAGGGCCTACACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTGAACAACTGCAAGAAGTTGAAGAAGATGCCCTTCAAGGCCATTGAAAATCGACAAGCTGATGAGGCTATTGCTCCGTTGTTCGAATATGATGTTAGAGGACC
TCCACCAGCTGCTGATAGCACCTCTTCAGGAGAGAAAAAGAATGAAGAGGGAATTGAAGAAGAAGAGGTCGAGACCTCTAGTGATAGCAAAACAGAAACAAATTCTGAAA
TTGAGGAATTGGACGATGATCAAGTAACAATTTCTACAGCTTTGAGGAAGAAAATAAGAAGAGAATTGAAAGCCGAGAGGAGGACAAAGAATAAGAATGACCCTATTTTT
GCCAAGGGGCCAAGGGCAAGGTCCATGGACGCCTCTCCTGCACCTTCGACAACCTCCACACTTGTCAAAGCAAAGACCAAATTGCCTAAGGCTCCAACACCAAAGAATCT
GTTCCCTGAAGTCTTCAAGGATATTAATTTCCAAGAGAAGATGGAGATTATGAGGAAAAGAGACTTCCTGAACGAGAAGGAATTCTCAAACAGAGCAGGAACTTTGCAAG
ATTTTGAGACCGTGGTGCCTCTAGTTCGAGAGTTTTATGCTGGTTTGAGGGAAGAGAGCATGAGCATGGCGGTGGTGAGAGATAAGATGTTGAAAGAAGCATTGAAAATG
GTGGCCAACAAGGGAGTTCAATGGAAGGAGTCTCAAACAAAGGTTAAGACACTAGTGCCAAGTGATCTCAAGCCAGAACCGGCAGTGTGGCTTCACTTCATCAAGAATAG
ACTGATGCCCATAACCCACGACAGTACTATTTCAGTAGAGAGGGTGATGCTTCTCTACAACATCATGAAAGGGTTGGAGAGAGTGAAGATAGTTCTGGGAAAAGATGAGG
AACATCACTTTTTCAGACCCACCATTGACTTACCTCTGATTGGGAAGCTCCAACAGAACAACGCTCAAAGGAAGGACAAGGCTTCCACATCCCACGCTACTCCATCCACG
GGGTTGAATCCTGTTTCACCTCCTCAGCACACTCCTATTTCAGGGCCTACACCATAA
Protein sequenceShow/hide protein sequence
MKLNNCKKLKKMPFKAIENRQADEAIAPLFEYDVRGPPPAADSTSSGEKKNEEGIEEEEVETSSDSKTETNSEIEELDDDQVTISTALRKKIRRELKAERRTKNKNDPIF
AKGPRARSMDASPAPSTTSTLVKAKTKLPKAPTPKNLFPEVFKDINFQEKMEIMRKRDFLNEKEFSNRAGTLQDFETVVPLVREFYAGLREESMSMAVVRDKMLKEALKM
VANKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPITHDSTISVERVMLLYNIMKGLERVKIVLGKDEEHHFFRPTIDLPLIGKLQQNNAQRKDKASTSHATPST
GLNPVSPPQHTPISGPTP