CuGenDBv2

Gene ID	Spg026478
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ABC transporter B family member 26, chloroplastic isoform X2
Genome location	scaffold13:17836207..17843664
RNA-Seq Expression	Spg026478
Synteny	Spg026478
Gene Ontology terms	GO:0055085 - transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003677 - DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domains	IPR001739 - Methyl-CpG DNA binding IPR011527 - ABC transporter type 1, transmembrane domain IPR016177 - DNA-binding domain superfamily IPR036640 - ABC transporter type 1, transmembrane domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6573712.1 ABC transporter B family member 26, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

8.4e-41

68.75

Show/hide

Query:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC
        + + VKRTRETLY A LLQDISFFDSETVGDLTS LGADC+QVSRVIGNDLNLILRNILQ              LGLCTLIIC TLGAIML+Y       
Subjt:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC

Query:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
                          RY KKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
Subjt:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG

KAG7012789.1 ABC transporter B family member 26, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

8.4e-41

68.75

Show/hide

Query:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC
        + + VKRTRETLY A LLQDISFFDSETVGDLTS LGADC+QVSRVIGNDLNLILRNILQ              LGLCTLIIC TLGAIML+Y       
Subjt:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC

Query:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
                          RY KKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
Subjt:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG

XP_022945847.1 ABC transporter B family member 26, chloroplastic isoform X1 [Cucurbita moschata]

9.9e-42

69.38

Show/hide

Query:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC
        + + VKRTRETLY A LLQDISFFDSETVGDLTS LGADC+QVSRVIGNDLNLILRNILQ              LGLCTLIICFTLGAIML+Y       
Subjt:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC

Query:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
                          RY KKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
Subjt:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG

XP_022945848.1 ABC transporter B family member 26, chloroplastic isoform X2 [Cucurbita moschata]

9.9e-42

69.38

Show/hide

Query:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC
        + + VKRTRETLY A LLQDISFFDSETVGDLTS LGADC+QVSRVIGNDLNLILRNILQ              LGLCTLIICFTLGAIML+Y       
Subjt:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC

Query:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
                          RY KKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
Subjt:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG

XP_023541464.1 ABC transporter B family member 26, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]

8.4e-41

68.75

Show/hide

Query:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC
        + + VKRTRETLY A LLQDISFFDSETVGDLTS LGADC+QVSRVIGNDLNLILRNILQ              LGLCTLIIC TLGAIML+Y       
Subjt:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC

Query:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
                          RY KKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
Subjt:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SWM5 ABC transporter B family member 26

2.0e-40

67.5

Show/hide

Query:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC
        + + VKRTRETLY A LLQDISFFD+ETVGDLTS LGADC+QVSRVIGNDLNLILRNILQ              LGLCTL+IC TLGAIML+Y       
Subjt:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC

Query:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
                          RY KKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
Subjt:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG

A0A6J1G219 ABC transporter B family member 26, chloroplastic isoform X1

4.8e-42

69.38

Show/hide

Query:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC
        + + VKRTRETLY A LLQDISFFDSETVGDLTS LGADC+QVSRVIGNDLNLILRNILQ              LGLCTLIICFTLGAIML+Y       
Subjt:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC

Query:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
                          RY KKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
Subjt:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG

A0A6J1G250 ABC transporter B family member 26, chloroplastic isoform X2

4.8e-42

69.38

Show/hide

Query:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC
        + + VKRTRETLY A LLQDISFFDSETVGDLTS LGADC+QVSRVIGNDLNLILRNILQ              LGLCTLIICFTLGAIML+Y       
Subjt:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC

Query:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
                          RY KKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
Subjt:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG

A0A6J1HT83 ABC transporter B family member 26, chloroplastic isoform X1

1.2e-40

68.12

Show/hide

Query:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC
        + + VKRTRETLY A LLQDISFFDSETVGDLTS LGADC+QVSRVIGNDLNLILRNILQ              LGLCTLIIC TLGAIML+Y       
Subjt:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC

Query:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
                          +Y KKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
Subjt:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG

A0A6J1HUU3 ABC transporter B family member 26, chloroplastic isoform X2

1.2e-40

68.12

Show/hide

Query:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC
        + + VKRTRETLY A LLQDISFFDSETVGDLTS LGADC+QVSRVIGNDLNLILRNILQ              LGLCTLIIC TLGAIML+Y       
Subjt:  DFVEVKRTRETLYYA-LLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC

Query:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
                          +Y KKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG
Subjt:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELG

SwissProt top hits

e value

%identity

Alignment

Q8RY46 ABC transporter B family member 26, chloroplastic

1.8e-33

53.8

Show/hide

Query:  DFVEVKRTRETLYYALL-QDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC
        + + VKR RETLY  LL QDISFFDS+TVGDLTS LG+DC+QVSRVIGNDLN+I RN+LQ              LGLCTL+IC  L A+M +Y       
Subjt:  DFVEVKRTRETLYYALL-QDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC

Query:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEE
                           Y KK AK++Q++TAS+N+VAQET SL+RTVRVYGTEK+E
Subjt:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEE

Q9JJ59 ABC-type oligopeptide transporter ABCB9

3.7e-07

32.37

Show/hide

Query:  RTRETLYYALL-QDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQSLGLCTLIICFTLGAIMLLYDRYLCICVILLAIAISNILMHVLQHR
        R R  L+ +L+ Q+ SFFD    GDL S L +D   VS ++  ++N+ LRN ++  G+  ++  F+L   + L   ++   +I++   +SNI       +
Subjt:  RTRETLYYALL-QDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQSLGLCTLIICFTLGAIMLLYDRYLCICVILLAIAISNILMHVLQHR

Query:  YLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEE
        Y K+ +K VQ   A ++  A+ET+S ++TVR +  E+EE
Subjt:  YLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEE

Q9LTJ8 Methyl-CpG-binding domain-containing protein 13

1.1e-08

45.21

Show/hide

Query:  IEHYKDEDLLPGWIKEIKIRERAD-GIRKDPFYIDPKSRYIFHSKKGVLRYLETGEIIKHAFKPKEKGDNDQE
        +E    + L  GWIK+++I  R+    R+DPF+IDPKS YIF S K   RY+ETG I  +A K KE    D +
Subjt:  IEHYKDEDLLPGWIKEIKIRERAD-GIRKDPFYIDPKSRYIFHSKKGVLRYLETGEIIKHAFKPKEKGDNDQE

Q9MBG8 Defective in cullin neddylation protein AAR3

6.9e-14

55.22

Show/hide

Query:  ISVDFSEFSRFYEFVFFVCRENGQKNINQIPSFGLVIKLSVGRAVRAWRLVLDWRFLLLNEWCDFVE
        + VDF+EF+ FY+FVFF+CRENGQKNI            ++ RA+ AW+LVL  RF LLN WCDF+E
Subjt:  ISVDFSEFSRFYEFVFFVCRENGQKNINQIPSFGLVIKLSVGRAVRAWRLVLDWRFLLLNEWCDFVE

Q9NP78 ABC-type oligopeptide transporter ABCB9

2.2e-07

32.37

Show/hide

Query:  RTRETLYYALL-QDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQSLGLCTLIICFTLGAIMLLYDRYLCICVILLAIAISNILMHVLQHR
        R R  L+ +L+ Q+ SFFD    GDL S L +D   VS ++  ++N+ LRN ++  G+  ++  F+L   + L   ++   +I++   +SNI       +
Subjt:  RTRETLYYALL-QDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQSLGLCTLIICFTLGAIMLLYDRYLCICVILLAIAISNILMHVLQHR

Query:  YLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEE
        Y K+ +K VQ+  A +++ A+ET+S ++TVR +  E+EE
Subjt:  YLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEE

Arabidopsis top hits

e value

%identity

Alignment

AT1G70610.1 transporter associated with antigen processing protein 1

1.2e-34

53.8

Show/hide

Query:  DFVEVKRTRETLYYALL-QDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC
        + + VKR RETLY  LL QDISFFDS+TVGDLTS LG+DC+QVSRVIGNDLN+I RN+LQ              LGLCTL+IC  L A+M +Y       
Subjt:  DFVEVKRTRETLYYALL-QDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQS-------------LGLCTLIICFTLGAIMLLYDRYLCIC

Query:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEE
                           Y KK AK++Q++TAS+N+VAQET SL+RTVRVYGTEK+E
Subjt:  VILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEE

AT3G28970.1 Domain of unknown function (DUF298)

4.9e-15

55.22

Show/hide

Query:  ISVDFSEFSRFYEFVFFVCRENGQKNINQIPSFGLVIKLSVGRAVRAWRLVLDWRFLLLNEWCDFVE
        + VDF+EF+ FY+FVFF+CRENGQKNI            ++ RA+ AW+LVL  RF LLN WCDF+E
Subjt:  ISVDFSEFSRFYEFVFFVCRENGQKNINQIPSFGLVIKLSVGRAVRAWRLVLDWRFLLLNEWCDFVE

AT5G52230.1 methyl-CPG-binding domain protein 13

8.1e-10

45.21

Show/hide

Query:  IEHYKDEDLLPGWIKEIKIRERAD-GIRKDPFYIDPKSRYIFHSKKGVLRYLETGEIIKHAFKPKEKGDNDQE
        +E    + L  GWIK+++I  R+    R+DPF+IDPKS YIF S K   RY+ETG I  +A K KE    D +
Subjt:  IEHYKDEDLLPGWIKEIKIRERAD-GIRKDPFYIDPKSRYIFHSKKGVLRYLETGEIIKHAFKPKEKGDNDQE

AT5G52230.2 methyl-CPG-binding domain protein 13

8.1e-10

45.21

Show/hide

Query:  IEHYKDEDLLPGWIKEIKIRERAD-GIRKDPFYIDPKSRYIFHSKKGVLRYLETGEIIKHAFKPKEKGDNDQE
        +E    + L  GWIK+++I  R+    R+DPF+IDPKS YIF S K   RY+ETG I  +A K KE    D +
Subjt:  IEHYKDEDLLPGWIKEIKIRERAD-GIRKDPFYIDPKSRYIFHSKKGVLRYLETGEIIKHAFKPKEKGDNDQE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATTAGAAGCGGGCCCCACTTCGACAAAGACGATGGGAGTGCTGGGCGGGCCCTACTACATCGTAGAGCTAGTAAACGTTGGTTGTACTGGGTGTGCCCTACACTACG
TAGATCTGTCATGTTAGTAGAAATCGAGCTCCCGGTGCCTGATAACTACCAAAGTCTGTTTTCTGCTAAAAGCTTCCAGATCAAGCTCCAGTATGTGGGTGGAGTTGTAC
ATTGTGAGTCATGCCACCACGTACCAGTCTTCAATGTGAACGTTACCAGTCTTCAATGTGAACGTTACAATCTTATGAACCTGGACACCAATTTAATGTTGGGACTTGGT
TTTATTGAGCATTATAAAGATGAAGATTTGCTGCCTGGATGGATAAAGGAGATCAAGATTAGAGAAAGAGCAGATGGCATCAGGAAAGATCCCTTTTACATAGATCCAAA
ATCGAGATATATATTCCACTCCAAGAAGGGTGTTTTACGCTATCTCGAGACTGGAGAGATCATTAAACATGCATTTAAACCAAAGGAAAAGGGTGATAATGACCAAGAGT
TGATTAGTGAAAAAATATCAGTAGACTTCTCTGAATTTTCACGCTTCTACGAGTTTGTTTTCTTTGTGTGCCGTGAAAATGGTCAAAAGAATATCAATCAGATTCCTTCT
TTTGGCTTGGTCATAAAATTATCCGTTGGTAGGGCGGTTAGAGCATGGAGATTAGTTTTGGATTGGAGATTTCTGTTACTTAATGAGTGGTGTGACTTTGTTGAGGTCAA
GAGAACGAGAGAAACACTTTATTATGCACTTCTACAGGATATATCATTTTTTGACAGTGAAACTGTTGGTGACCTTACAAGTGGGCTTGGAGCTGATTGCAAGCAAGTGT
CGAGAGTCATTGGAAATGATCTTAATTTGATATTACGCAACATTCTCCAGTCTCTTGGTTTATGCACACTGATCATATGCTTCACTTTAGGAGCTATTATGCTATTGTAC
GACCGTTATCTCTGTATTTGTGTGATTTTGTTAGCAATTGCTATAAGTAATATCCTAATGCATGTCCTTCAACATAGATATCTGAAGAAGGCAGCAAAGATTGTCCAAGA
TGTCACTGCTTCTTCCAATGACGTTGCACAAGAAACATTGTCTTTGATCAGAACAGTTCGTGTTTATGGAACCGAGAAGGAGGAACTTGGAAGTGGTAGTTTAGTTTATG
ACATGGTAGTTTTTCTTCAAAGAAGTAAAGTTTATAGTATCGTGGTTTGTACTAACCCACCACTAAATTTTGCAGGTGATGAAGATTACTACGAATTGGGTGATGCTGAG
GCGGAGGTCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MIRSGPHFDKDDGSAGRALLHRRASKRWLYWVCPTLRRSVMLVEIELPVPDNYQSLFSAKSFQIKLQYVGGVVHCESCHHVPVFNVNVTSLQCERYNLMNLDTNLMLGLG
FIEHYKDEDLLPGWIKEIKIRERADGIRKDPFYIDPKSRYIFHSKKGVLRYLETGEIIKHAFKPKEKGDNDQELISEKISVDFSEFSRFYEFVFFVCRENGQKNINQIPS
FGLVIKLSVGRAVRAWRLVLDWRFLLLNEWCDFVEVKRTRETLYYALLQDISFFDSETVGDLTSGLGADCKQVSRVIGNDLNLILRNILQSLGLCTLIICFTLGAIMLLY
DRYLCICVILLAIAISNILMHVLQHRYLKKAAKIVQDVTASSNDVAQETLSLIRTVRVYGTEKEELGSGSLVYDMVVFLQRSKVYSIVVCTNPPLNFAGDEDYYELGDAE
AEV

Spg026478 (gene) of Sponge gourd (cylindrica) v1 genome