; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026526 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026526
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription initiation factor TFIID subunit 11
Genome locationscaffold8:2123504..2127638
RNA-Seq ExpressionSpg026526
SyntenySpg026526
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0051123 - RNA polymerase II preinitiation complex assembly (biological process)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR006809 - TAFII28-like protein domain
IPR009072 - Histone-fold
IPR045127 - Transcription initiation factor TFIID subunit 11-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596814.1 Transcription initiation factor TFIID subunit 11, partial [Cucurbita argyrosperma subsp. sororia]1.3e-9390.22Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPKPAAATT-HSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEEN
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTN  AATA A + LDLHD D +PK AAA   +S IPSASTTS+ VSSSSNVSAAPKTKEDD+EEEEEN
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPKPAAATT-HSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEEN

Query:  VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPC
        VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE ARVVMTERNDSG IRPC
Subjt:  VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPC

Query:  HLREAYRRLKLEGKVPRKSVSRLFR
        HLREAYRRLKLEGK+PRKSV RLFR
Subjt:  HLREAYRRLKLEGKVPRKSVSRLFR

KAG7028341.1 Transcription initiation factor TFIID subunit 11 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-9490.67Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPK-PAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEEN
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTN  AATA A + LDLHD D +PK  AAA T+S IPSASTTS+ VSSSSNVSAAPKTKEDD+EEEEEN
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPK-PAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEEN

Query:  VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPC
        VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE ARVVMTERNDSG IRPC
Subjt:  VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPC

Query:  HLREAYRRLKLEGKVPRKSVSRLFR
        HLREAYRRLKLEGK+PRKSV RLFR
Subjt:  HLREAYRRLKLEGKVPRKSVSRLFR

XP_022940909.1 transcription initiation factor TFIID subunit 11 [Cucurbita moschata]5.6e-9489.33Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPK-PAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEEN
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTN AA     ++ LDLHD D +PK  AAA T+S IPSASTTS+ VSSSSNVSAAPKTKEDD+EEEEEN
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPK-PAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEEN

Query:  VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPC
        VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE ARVVMTERNDSG IRPC
Subjt:  VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPC

Query:  HLREAYRRLKLEGKVPRKSVSRLFR
        HLREAYRRLKLEGK+PRKSV RLFR
Subjt:  HLREAYRRLKLEGKVPRKSVSRLFR

XP_023005534.1 transcription initiation factor TFIID subunit 11 [Cucurbita maxima]4.3e-9489.38Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPK--PAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEE
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTN  AATA A + +DLHD D DPK   AAA T+S +PSASTTS+ VSSSSN+SAAPKTKEDD+EEEEE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPK--PAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEE

Query:  NVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRP
        NVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE ARVVMTERNDSG IRP
Subjt:  NVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRP

Query:  CHLREAYRRLKLEGKVPRKSVSRLFR
        CHLREAYRRLKLEGK+PRKSV RLFR
Subjt:  CHLREAYRRLKLEGKVPRKSVSRLFR

XP_023538856.1 transcription initiation factor TFIID subunit 11 [Cucurbita pepo subsp. pepo]5.6e-9489.87Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPKPAAA---TTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEE
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTN  AATA A + LDLHD D +PK AAA    T+S IPSASTTS+ VSSSSNVSAAPKTKEDD+EEEE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPKPAAA---TTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEE

Query:  ENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIR
        ENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE ARVVMTERNDSG IR
Subjt:  ENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIR

Query:  PCHLREAYRRLKLEGKVPRKSVSRLFR
        PCHLREAYRRLKLEGK+PRKSV RLFR
Subjt:  PCHLREAYRRLKLEGKVPRKSVSRLFR

TrEMBL top hitse value%identityAlignment
A0A0A0L5S4 TAFII28 domain-containing protein4.8e-9187.5Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPKPAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEENV
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEI T  A + A A    DL D D DPK A+  THS  P ASTTSM VSSSS+VS APKTKEDDEEEEEENV
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPKPAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEENV

Query:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPCH
        EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE ARVVMTERND+GPIRPCH
Subjt:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPCH

Query:  LREAYRRLKLEGKVPRKSVSRLFR
        LREAYRRLKLEGK+PRKSV RLFR
Subjt:  LREAYRRLKLEGKVPRKSVSRLFR

A0A5D3D798 Transcription initiation factor TFIID subunit 112.8e-9187.95Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPKPAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEENV
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEI T  A   A A    DL D D DPK A+  THS  P  STTSM VSSSS+VSAAPKTKEDDEEEEEENV
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPKPAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEENV

Query:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPCH
        EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE ARVVMTERNDSGPIRPCH
Subjt:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPCH

Query:  LREAYRRLKLEGKVPRKSVSRLFR
        LREAYRRLKLEGK+PRKSV RLFR
Subjt:  LREAYRRLKLEGKVPRKSVSRLFR

A0A6J1DFN0 transcription initiation factor TFIID subunit 112.3e-9387.34Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPK-----PAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEE
        MKQSKDPFEAAFEEQEESPPNSPSAAD +EIQTN A     AS+ LD HD D DPK      AA  THS IPSA TTSM VSSSSNVSAAPKTK+DDEEE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPK-----PAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEE

Query:  EEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGP
        EEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE ARVVMTERND+GP
Subjt:  EEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGP

Query:  IRPCHLREAYRRLKLEGKVPRKSVSRLFR
        IRPCHLREAYRRLKLEGK+PRKSV RLFR
Subjt:  IRPCHLREAYRRLKLEGKVPRKSVSRLFR

A0A6J1FLN4 transcription initiation factor TFIID subunit 112.7e-9489.33Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPK-PAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEEN
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTN AA     ++ LDLHD D +PK  AAA T+S IPSASTTS+ VSSSSNVSAAPKTKEDD+EEEEEN
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPK-PAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEEN

Query:  VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPC
        VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE ARVVMTERNDSG IRPC
Subjt:  VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPC

Query:  HLREAYRRLKLEGKVPRKSVSRLFR
        HLREAYRRLKLEGK+PRKSV RLFR
Subjt:  HLREAYRRLKLEGKVPRKSVSRLFR

A0A6J1KZI1 transcription initiation factor TFIID subunit 112.1e-9489.38Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPK--PAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEE
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTN  AATA A + +DLHD D DPK   AAA T+S +PSASTTS+ VSSSSN+SAAPKTKEDD+EEEEE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPK--PAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEE

Query:  NVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRP
        NVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE ARVVMTERNDSG IRP
Subjt:  NVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRP

Query:  CHLREAYRRLKLEGKVPRKSVSRLFR
        CHLREAYRRLKLEGK+PRKSV RLFR
Subjt:  CHLREAYRRLKLEGKVPRKSVSRLFR

SwissProt top hitse value%identityAlignment
F4HR03 Transcription initiation factor TFIID subunit 11b3.8e-3747.11Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPKPAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEENV
        MK SKDPFEAA EEQEESP  +    +  E                                                     A  K K     E +   
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPKPAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEENV

Query:  EVELAKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPC
        EVE  K  +  DP   A KMQ ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVE ARVVM ER +SGPIRPC
Subjt:  EVELAKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPC

Query:  HLREAYRRLKLEGKVPRKSVSRLFR
        H+RE+YRRLKL+GKVP++SV RLFR
Subjt:  HLREAYRRLKLEGKVPRKSVSRLFR

Q15544 Transcription initiation factor TFIID subunit 116.2e-1940.91Show/hide
Query:  DSDADPKPAAA---TTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKAN
        D+D D K AAA      S   S  TT     SS    AA K K D +E++E+  +V         D D++ KMQ ++S F+EEQ++RYE +RR+ F KA 
Subjt:  DSDADPKPAAA---TTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKAN

Query:  MKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPCHLREAYRRLKLEGKVPRKSVSRL
        +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  +  P++P H+REA RRLK +G++P     ++
Subjt:  MKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPCHLREAYRRLKLEGKVPRKSVSRL

Q5RA91 Transcription initiation factor TFIID subunit 111.6e-1941.48Show/hide
Query:  DSDADPKPAAA---TTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKAN
        D+DAD K AAA      S   S  TT     SS    AA K K D +E++E+  +V         D D++ KMQ ++S F+EEQ++RYE +RR+ F KA 
Subjt:  DSDADPKPAAA---TTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKAN

Query:  MKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPCHLREAYRRLKLEGKVPRKSVSRL
        +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  +  P++P H+REA RRLK +G++P     ++
Subjt:  MKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPCHLREAYRRLKLEGKVPRKSVSRL

Q99JX1 Transcription initiation factor TFIID subunit 113.1e-1835.81Show/hide
Query:  ESPPNSPSAADDLEIQTNAAAATATASNVLDL-----HDSDADPKPAAATTHSNIPSASTTSMIVSSSSNVS----AAPKTKEDDEEEEEENVEVELAKF
        ESP +      + E +T A      A++   +      D DAD K AAA   S + S   + +  +   N S    AA K K D ++++E+  +V     
Subjt:  ESPPNSPSAADDLEIQTNAAAATATASNVLDL-----HDSDADPKPAAATTHSNIPSASTTSMIVSSSSNVS----AAPKTKEDDEEEEEENVEVELAKF

Query:  PSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPCHLREAYRR
            D D++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  ++ P++P H+REA RR
Subjt:  PSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPCHLREAYRR

Query:  LKLEGKVPRKSVSRL
        LK +G++P     ++
Subjt:  LKLEGKVPRKSVSRL

Q9M565 Transcription initiation factor TFIID subunit 118.5e-5355.75Show/hide
Query:  MKQSKDPFEAAF-EEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDS-DADPKPAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEE
        MK SKDPFEAA  EEQEESPP SP                 +    +++  + D D +P            + TS++V+ + N     K K++D+EEEEE
Subjt:  MKQSKDPFEAAF-EEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDS-DADPKPAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEE

Query:  NVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRP
        N++VEL K+P+S DP KMAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVE ARVVM ER +SGPIRP
Subjt:  NVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRP

Query:  CHLREAYRRLKLEGKVPRKSVSRLFR
        CH+RE+YRRLKLEGKVP++SV RLFR
Subjt:  CHLREAYRRLKLEGKVPRKSVSRLFR

Arabidopsis top hitse value%identityAlignment
AT1G20000.1 TBP-associated factor 11B2.7e-3847.11Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPKPAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEENV
        MK SKDPFEAA EEQEESP  +    +  E                                                     A  K K     E +   
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPKPAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEENV

Query:  EVELAKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPC
        EVE  K  +  DP   A KMQ ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVE ARVVM ER +SGPIRPC
Subjt:  EVELAKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPC

Query:  HLREAYRRLKLEGKVPRKSVSRLFR
        H+RE+YRRLKL+GKVP++SV RLFR
Subjt:  HLREAYRRLKLEGKVPRKSVSRLFR

AT4G20280.1 TBP-associated factor 116.1e-5455.75Show/hide
Query:  MKQSKDPFEAAF-EEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDS-DADPKPAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEE
        MK SKDPFEAA  EEQEESPP SP                 +    +++  + D D +P            + TS++V+ + N     K K++D+EEEEE
Subjt:  MKQSKDPFEAAF-EEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDS-DADPKPAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEE

Query:  NVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRP
        N++VEL K+P+S DP KMAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVE ARVVM ER +SGPIRP
Subjt:  NVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRP

Query:  CHLREAYRRLKLEGKVPRKSVSRLFR
        CH+RE+YRRLKLEGKVP++SV RLFR
Subjt:  CHLREAYRRLKLEGKVPRKSVSRLFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAATCGAAGGACCCATTTGAAGCGGCGTTTGAGGAGCAGGAAGAGTCGCCGCCGAACTCCCCTTCCGCAGCCGACGATCTCGAAATTCAGACCAATGCAGCCGC
AGCCACCGCCACCGCCTCCAATGTTCTTGATTTGCATGACAGTGATGCTGATCCAAAACCTGCCGCTGCCACCACACATTCCAACATTCCTTCTGCATCCACCACTTCTA
TGATCGTTTCCTCTTCCTCCAATGTCTCTGCAGCCCCCAAAACCAAAGAAGACGACGAGGAAGAAGAGGAAGAGAATGTGGAAGTTGAGCTCGCCAAATTCCCCTCAAGC
GGTGATCCAGATAAGATGGCGAAGATGCAAGCCATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATAT
GAAAAGGCTATTAGCAAGCATCTCAGGAACACAGAAAATTTCTGTACCGATGACGATCGTAGTGTCTGGGATCGCAAAGATGTTCGTTGGTGAACTCGTAGAAATGGCAC
GAGTTGTTATGACGGAGCGGAATGATTCTGGACCTATCAGGCCGTGCCATCTCCGAGAAGCATATAGAAGACTAAAGCTTGAAGGTAAGGTTCCAAGGAAATCAGTGTCT
AGGCTCTTTCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAATCGAAGGACCCATTTGAAGCGGCGTTTGAGGAGCAGGAAGAGTCGCCGCCGAACTCCCCTTCCGCAGCCGACGATCTCGAAATTCAGACCAATGCAGCCGC
AGCCACCGCCACCGCCTCCAATGTTCTTGATTTGCATGACAGTGATGCTGATCCAAAACCTGCCGCTGCCACCACACATTCCAACATTCCTTCTGCATCCACCACTTCTA
TGATCGTTTCCTCTTCCTCCAATGTCTCTGCAGCCCCCAAAACCAAAGAAGACGACGAGGAAGAAGAGGAAGAGAATGTGGAAGTTGAGCTCGCCAAATTCCCCTCAAGC
GGTGATCCAGATAAGATGGCGAAGATGCAAGCCATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATAT
GAAAAGGCTATTAGCAAGCATCTCAGGAACACAGAAAATTTCTGTACCGATGACGATCGTAGTGTCTGGGATCGCAAAGATGTTCGTTGGTGAACTCGTAGAAATGGCAC
GAGTTGTTATGACGGAGCGGAATGATTCTGGACCTATCAGGCCGTGCCATCTCCGAGAAGCATATAGAAGACTAAAGCTTGAAGGTAAGGTTCCAAGGAAATCAGTGTCT
AGGCTCTTTCGCTGA
Protein sequenceShow/hide protein sequence
MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNAAAATATASNVLDLHDSDADPKPAAATTHSNIPSASTTSMIVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSS
GDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVEMARVVMTERNDSGPIRPCHLREAYRRLKLEGKVPRKSVS
RLFR