; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026606 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026606
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase RNF126-like
Genome locationscaffold6:18472936..18473673
RNA-Seq ExpressionSpg026606
SyntenySpg026606
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605222.1 E3 ubiquitin-protein ligase AMFR, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3644.78Show/hide
Query:  FSTNSCLQYSIRTTGNSSGNQILKLRLGHCSRLIS-----GFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKI
        F+  S L+YS+R   N   +Q+L+LRLG+ SRLIS     G P+ IL++TPST M +ALFPL LRE E+ +    H  +VE + SFN  S   + I +KI
Subjt:  FSTNSCLQYSIRTTGNSSGNQILKLRLGHCSRLIS-----GFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKI

Query:  ASVAA--------GGFSVEADIDYVMMFWME------GEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYD--ELESGNGEEMT
         S             F + ADIDY+ MFWME      G G+  EE  ++EE G  A E                GIG E+ CSVCY+  E E G  +E+ 
Subjt:  ASVAA--------GGFSVEADIDYVMMFWME------GEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYD--ELESGNGEEMT

Query:  KMPCGHVYHKPCILTWLQRSNSCPNCRSKL
        K+PCGH +HK CILTW QRSNSCP CR+KL
Subjt:  KMPCGHVYHKPCILTWLQRSNSCPNCRSKL

XP_022947841.1 NEP1-interacting protein-like 1 [Cucurbita moschata]1.5e-3644.78Show/hide
Query:  FSTNSCLQYSIRTTGNSSGNQILKLRLGHCSRLIS-----GFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKI
        F+  S L+YS+R   N   +Q+L+LRLG+ SRLIS     G P+ IL++TPST M +ALFPL LRE E+ +    H  +VE + SFN  S   + I +KI
Subjt:  FSTNSCLQYSIRTTGNSSGNQILKLRLGHCSRLIS-----GFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKI

Query:  ASVAA--------GGFSVEADIDYVMMFWME------GEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYD--ELESGNGEEMT
         S             F + ADIDY+ MFWME      G G+  EE  ++EE G  A E                GIG E+ CSVCY+  E E G  +E+ 
Subjt:  ASVAA--------GGFSVEADIDYVMMFWME------GEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYD--ELESGNGEEMT

Query:  KMPCGHVYHKPCILTWLQRSNSCPNCRSKL
        K+PCGH +HK CILTW QRSNSCP CR+KL
Subjt:  KMPCGHVYHKPCILTWLQRSNSCPNCRSKL

XP_023539471.1 uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo]1.4e-3742.92Show/hide
Query:  NQILKLRLGHCSRLI-----SGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIAS----VAAGG----FSVE
        +Q+L++R+ H +RL+     SG+P  I+ +T  T M +A FPL LRE E+ +   A+  + EFL S+N  +++ + I  +IAS    +A G     F + 
Subjt:  NQILKLRLGHCSRLI-----SGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIAS----VAAGG----FSVE

Query:  ADIDYVMMFWMEGEGIGEEEIPMVEE---------------------GGRGAPEWAIERLMEQKFDGIGIGIGKE-DSCSVCYDELESGNGEEMTKMPCG
        A+IDY+ MFW++   I  EE    EE                     G RGAPE AIERL ++KFDG G   G++  +CSVCYDE++ G GEE++++PCG
Subjt:  ADIDYVMMFWMEGEGIGEEEIPMVEE---------------------GGRGAPEWAIERLMEQKFDGIGIGIGKE-DSCSVCYDELESGNGEEMTKMPCG

Query:  HVYHKPCILTWLQRSNSCPNCRSKLQ
        HVYHK C+LTWLQR+NSCP CR KL+
Subjt:  HVYHKPCILTWLQRSNSCPNCRSKLQ

XP_023539480.1 E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo]3.0e-4046.26Show/hide
Query:  NQILKLRLGHCSRLI-----SGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIAS----VAAGG----FSVE
        +Q+L++R+GH SRL+     SG+P  I+ +T  T M +A FPL LRE E+ +   A+ +  EFL S+N  +++ + I  +IAS    +A G     F + 
Subjt:  NQILKLRLGHCSRLI-----SGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIAS----VAAGG----FSVE

Query:  ADIDYVMMFWMEGEGIGEEEIPMVEE---------GGRGAPEWAIERLMEQKFDGIGIGIGKE-DSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWL
        A+IDY+ MFWM+      EE    EE         G RGAPE AIERL ++KFDG G   G++  +CSVCYDE++ G GEE++++PCGHVYHK C+LTWL
Subjt:  ADIDYVMMFWMEGEGIGEEEIPMVEE---------GGRGAPEWAIERLMEQKFDGIGIGIGKE-DSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWL

Query:  QRSNSCPNCRSKLQ
        QR+NSCP CR+KL+
Subjt:  QRSNSCPNCRSKLQ

XP_038876917.1 E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida]1.7e-3545.42Show/hide
Query:  FSTNSCLQYSIRTTGNSSGNQILKLRLGHCSRLISG------FPHQILQQTPSTLMGEALFPLC-LREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFE
        FST S + Y    T NS  +Q+L++R G CSRLIS        P +ILQQT ST +GEALFP   +R+  EE      F V  FL SFN  SSV  ++  
Subjt:  FSTNSCLQYSIRTTGNSSGNQILKLRLGHCSRLISG------FPHQILQQTPSTLMGEALFPLC-LREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFE

Query:  KIASVAA------GGFSVEADIDYVMMFWMEGEG-------IGEEEIPMVEEGG------RGAPEWAIERLMEQKFDGIGIGIGKED----SCSVCYDEL
        KI S A       G F +EA+IDY+  FWME          IGEE   +  E G       GAPE AIER+ +QKFDG      KE+     C VC ++L
Subjt:  KIASVAA------GGFSVEADIDYVMMFWMEGEG-------IGEEEIPMVEEGG------RGAPEWAIERLMEQKFDGIGIGIGKED----SCSVCYDEL

Query:  ESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKLQ
        +   G E++++PCGHVYHK CILTWL+RSN+CP CR  L+
Subjt:  ESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKLQ

TrEMBL top hitse value%identityAlignment
A0A6J1G7L1 NEP1-interacting protein-like 17.5e-3744.78Show/hide
Query:  FSTNSCLQYSIRTTGNSSGNQILKLRLGHCSRLIS-----GFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKI
        F+  S L+YS+R   N   +Q+L+LRLG+ SRLIS     G P+ IL++TPST M +ALFPL LRE E+ +    H  +VE + SFN  S   + I +KI
Subjt:  FSTNSCLQYSIRTTGNSSGNQILKLRLGHCSRLIS-----GFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKI

Query:  ASVAA--------GGFSVEADIDYVMMFWME------GEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYD--ELESGNGEEMT
         S             F + ADIDY+ MFWME      G G+  EE  ++EE G  A E                GIG E+ CSVCY+  E E G  +E+ 
Subjt:  ASVAA--------GGFSVEADIDYVMMFWME------GEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYD--ELESGNGEEMT

Query:  KMPCGHVYHKPCILTWLQRSNSCPNCRSKL
        K+PCGH +HK CILTW QRSNSCP CR+KL
Subjt:  KMPCGHVYHKPCILTWLQRSNSCPNCRSKL

A0A6J1G7Z5 E3 ubiquitin-protein ligase RNF126-like7.7e-3443.78Show/hide
Query:  QYSIRTTGNSS------GNQILKLRLGHCSRLISGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIAS----
        Q SI++T N +        Q+L+LRLG+ + LIS    QILQQTP+T MG+ALFP  LR+ +    FL++  V++FL SF+   +  D+I+E+I+S    
Subjt:  QYSIRTTGNSS------GNQILKLRLGHCSRLISGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIAS----

Query:  VAAG----GFSVEADIDYVMMFWMEGEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYDELESGNGEEMTKMPCGHVYHKPCIL
        +AAG     F +  ++D + M W++ +    EE    E    GAP  AIERL  Q+FDG+     +E  CSVC + L+    EE++++PCGHVYHK CIL
Subjt:  VAAG----GFSVEADIDYVMMFWMEGEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYDELESGNGEEMTKMPCGHVYHKPCIL

Query:  TWLQRSNSCPNCRSKLQ
         WLQ SNSCP CR+KL+
Subjt:  TWLQRSNSCPNCRSKLQ

A0A6J1G809 probable E3 ubiquitin-protein ligase RHA4A2.9e-3344.25Show/hide
Query:  FSTNSCLQYSIRTTGNSSGN--------QILKLRLGHCSRLISGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIF
        F  +   Q S RT  NS+G         Q ++LRLGH S LIS    QILQQTPST MG+ALFP  LR+      FL+   V+ FL SF+   +V ++IF
Subjt:  FSTNSCLQYSIRTTGNSSGN--------QILKLRLGHCSRLISGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIF

Query:  EKIAS----VAAG----GFSVEADIDYVMMFWMEGEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYDELESGNGEEMTKMPCG
         +I+S    +AAG     F +  D+D + M W++ +    EE         GAP  AIERL  Q+FD  G+   +E  CSVC + L+    EE++++PCG
Subjt:  EKIAS----VAAG----GFSVEADIDYVMMFWMEGEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYDELESGNGEEMTKMPCG

Query:  HVYHKPCILTWLQRSNSCPNCRSKLQ
        HVYHK CIL WLQ SNSCP CR+KL+
Subjt:  HVYHKPCILTWLQRSNSCPNCRSKLQ

A0A6J1KYV1 E3 ubiquitin-protein ligase RNF126-like1.6e-3445.62Show/hide
Query:  QYSIRTTGN---SSGN---QILKLRLGHCSRLISGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIAS----
        Q SI++T N   +SG    Q+L+LRLGH + LIS    QILQQTPST +G+ALFP  LR+ +    FL++  V++FL SF+   +  D+I+E+I+S    
Subjt:  QYSIRTTGN---SSGN---QILKLRLGHCSRLISGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEKIAS----

Query:  VAAG----GFSVEADIDYVMMFWMEGEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYDELESGNGEEMTKMPCGHVYHKPCIL
        +AAG     F +  ++D   M W++ +    EE    E    GAP  AIERL  QKFDG+     +E  CSVC + L+    EE++++PCGHVYHK CIL
Subjt:  VAAG----GFSVEADIDYVMMFWMEGEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYDELESGNGEEMTKMPCGHVYHKPCIL

Query:  TWLQRSNSCPNCRSKLQ
         WLQ SNSCP CR+KL+
Subjt:  TWLQRSNSCPNCRSKLQ

A0A6J1L387 RING-H2 finger protein ATL16-like1.6e-3443.3Show/hide
Query:  FSTNSCLQYSIR--TTGNSSGN----QILKLRLGHCSRLISGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEK
        F  +   Q+SIR  TTG  + +    Q ++LRLGH S LIS    QILQQ+PST +GE+LFP  LR+ E    FL ++ V+ FL SF+   +  D+I+++
Subjt:  FSTNSCLQYSIR--TTGNSSGN----QILKLRLGHCSRLISGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVVEFLCSFNFRSSVGDVIFEK

Query:  IASVAAG--------GFSVEADIDYVMMFWMEGEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYDELESGNGEEMTKMPCGHV
        I+S A           F +  D+D + M W++ +    EE         GAP  AIERL  QKFDG+     +E  CSVC + L     EE++++PCGHV
Subjt:  IASVAAG--------GFSVEADIDYVMMFWMEGEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYDELESGNGEEMTKMPCGHV

Query:  YHKPCILTWLQRSNSCPNCRSKLQ
        YHK CIL WLQ SNSCP CR+KL+
Subjt:  YHKPCILTWLQRSNSCPNCRSKLQ

SwissProt top hitse value%identityAlignment
O22197 Probable E3 ubiquitin-protein ligase RHC1A6.3e-0950Show/hide
Query:  EDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL
        + +C VC DE E G+  E  +MPC H+YH  CI+ WL + NSCP CR +L
Subjt:  EDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL

P0CH30 E3 ubiquitin-protein ligase RING13.7e-0951.02Show/hide
Query:  DSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL
        + C+VC D+ E G   E  +MPC H+YHK C+L WL+  NSCP CR +L
Subjt:  DSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL

Q8LPN7 E3 ubiquitin-protein ligase RING1-like8.3e-0948.98Show/hide
Query:  DSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL
        + C+VC DE E  +G ++ +MPC HV+H+ C+L WL+  NSCP CR +L
Subjt:  DSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL

Q8NG27 E3 ubiquitin-protein ligase Praja-13.1e-0846Show/hide
Query:  IGKEDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCR
        +G+E  C +C  E     GE  T++PC H +HKPC+  WLQ+S +CP CR
Subjt:  IGKEDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCR

Q9Y7K6 Uncharacterized RING finger protein C2A9.04c2.4e-0839.58Show/hide
Query:  SCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL
        +C +CYD++   + ++ TKMPCGH++ K C+  WL+   +CP CR ++
Subjt:  SCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL

Arabidopsis top hitse value%identityAlignment
AT2G40830.1 RING-H2 finger C1A4.5e-1050Show/hide
Query:  EDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL
        + +C VC DE E G+  E  +MPC H+YH  CI+ WL + NSCP CR +L
Subjt:  EDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL

AT2G40830.2 RING-H2 finger C1A4.5e-1050Show/hide
Query:  EDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL
        + +C VC DE E G+  E  +MPC H+YH  CI+ WL + NSCP CR +L
Subjt:  EDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL

AT2G40830.3 RING-H2 finger C1A4.5e-1050Show/hide
Query:  EDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL
        + +C VC DE E G+  E  +MPC H+YH  CI+ WL + NSCP CR +L
Subjt:  EDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL

AT3G10815.1 RING/U-box superfamily protein4.5e-1047.17Show/hide
Query:  IGKEDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL
        +G +  C VC D+ E G+  +  KMPC H+YH  CIL WL + N+CP CR +L
Subjt:  IGKEDSCSVCYDELESGNGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL

AT4G12210.1 RING/U-box superfamily protein6.9e-1148Show/hide
Query:  DSCSVCYDELESG-NGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL
        +SCS+C + L SG    ++T+M C HV+H PC+L W  R N+CP CR++L
Subjt:  DSCSVCYDELESG-NGEEMTKMPCGHVYHKPCILTWLQRSNSCPNCRSKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACACCGCTCCCGCCTCCCCCCGTGCAAAATCAAAACTCTGTTTATCGATTCTCTGTTTTTGGGTTTGATCAGAGACAGACTCAGAGCCACCATGTCTTTCTTCTC
CACGAATTCATGCCTCCAATACTCTATCCGCACCACTGGAAACAGCAGCGGCAATCAAATTCTGAAACTCCGATTAGGGCATTGTAGCCGCCTGATTTCTGGATTTCCAC
ACCAAATCTTGCAGCAAACTCCGTCGACTCTGATGGGGGAGGCTCTGTTTCCTCTCTGTTTGAGGGAGCGTGAAGAAGAAATGCGGTTCCTGGCCCACTTTCGCGTGGTT
GAGTTTCTGTGTTCGTTCAACTTCCGTAGCTCCGTCGGCGACGTTATCTTTGAGAAGATTGCCTCCGTTGCGGCGGGCGGCTTCAGCGTAGAGGCGGACATCGACTACGT
GATGATGTTTTGGATGGAGGGAGAGGGCATCGGAGAGGAGGAGATTCCGATGGTTGAAGAAGGTGGAAGAGGGGCGCCAGAGTGGGCGATTGAGAGACTGATGGAGCAGA
AATTTGATGGGATTGGGATTGGGATTGGGAAGGAGGATAGTTGCAGTGTGTGCTATGATGAACTAGAGAGCGGGAACGGAGAGGAGATGACGAAGATGCCTTGTGGACAC
GTGTATCACAAACCCTGCATTTTGACCTGGCTTCAAAGGAGCAACTCCTGCCCTAATTGTCGAAGCAAATTACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACACCGCTCCCGCCTCCCCCCGTGCAAAATCAAAACTCTGTTTATCGATTCTCTGTTTTTGGGTTTGATCAGAGACAGACTCAGAGCCACCATGTCTTTCTTCTC
CACGAATTCATGCCTCCAATACTCTATCCGCACCACTGGAAACAGCAGCGGCAATCAAATTCTGAAACTCCGATTAGGGCATTGTAGCCGCCTGATTTCTGGATTTCCAC
ACCAAATCTTGCAGCAAACTCCGTCGACTCTGATGGGGGAGGCTCTGTTTCCTCTCTGTTTGAGGGAGCGTGAAGAAGAAATGCGGTTCCTGGCCCACTTTCGCGTGGTT
GAGTTTCTGTGTTCGTTCAACTTCCGTAGCTCCGTCGGCGACGTTATCTTTGAGAAGATTGCCTCCGTTGCGGCGGGCGGCTTCAGCGTAGAGGCGGACATCGACTACGT
GATGATGTTTTGGATGGAGGGAGAGGGCATCGGAGAGGAGGAGATTCCGATGGTTGAAGAAGGTGGAAGAGGGGCGCCAGAGTGGGCGATTGAGAGACTGATGGAGCAGA
AATTTGATGGGATTGGGATTGGGATTGGGAAGGAGGATAGTTGCAGTGTGTGCTATGATGAACTAGAGAGCGGGAACGGAGAGGAGATGACGAAGATGCCTTGTGGACAC
GTGTATCACAAACCCTGCATTTTGACCTGGCTTCAAAGGAGCAACTCCTGCCCTAATTGTCGAAGCAAATTACAATAA
Protein sequenceShow/hide protein sequence
MRHRSRLPPCKIKTLFIDSLFLGLIRDRLRATMSFFSTNSCLQYSIRTTGNSSGNQILKLRLGHCSRLISGFPHQILQQTPSTLMGEALFPLCLREREEEMRFLAHFRVV
EFLCSFNFRSSVGDVIFEKIASVAAGGFSVEADIDYVMMFWMEGEGIGEEEIPMVEEGGRGAPEWAIERLMEQKFDGIGIGIGKEDSCSVCYDELESGNGEEMTKMPCGH
VYHKPCILTWLQRSNSCPNCRSKLQ