; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026613 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026613
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING-type domain-containing protein
Genome locationscaffold6:17791150..17794922
RNA-Seq ExpressionSpg026613
SyntenySpg026613
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013762.1 hypothetical protein SDJN02_23929 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-4055.05Show/hide
Query:  LGSCKCCAEAMEVVGAQARANVCSSGLS--ILQMGRRNIVAPCASRPMWQKMLHGCIFSLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLN
        L S   C      +  Q     CS+G       M ++N VA   +R  +Q +            NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLN
Subjt:  LGSCKCCAEAMEVVGAQARANVCSSGLS--ILQMGRRNIVAPCASRPMWQKMLHGCIFSLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLN

Query:  STLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGAD
        STLE +GKDLKEL +E     DEVKK                       EEL+KST++CKRLH RSMALAKE+AAFKLVSE+DLDEE V KLSSLGSGAD
Subjt:  STLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGAD

Query:  NKDTIDILRKSLVLCNRS
        NKDTIDILRKSLVL NRS
Subjt:  NKDTIDILRKSLVLCNRS

XP_022147224.1 uncharacterized protein LOC111016223 [Momordica charantia]4.0e-4053.92Show/hide
Query:  LGSCKCCAEAMEVVGAQARANVCSSGLSILQMGRRNIVAPCASRPMWQKMLHGCIF-SLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNS
        L S   C      +  Q     CSS       G++    P   +    K +    F S+ +  NDS+L++KP DWVERDPE LR EVKRLEM KVSVLNS
Subjt:  LGSCKCCAEAMEVVGAQARANVCSSGLSILQMGRRNIVAPCASRPMWQKMLHGCIF-SLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNS

Query:  TLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADN
         LE +GKDLK+L++E     DEVKK                       EELDKST++CKRLH RSMALAKE+AAFKLV+ELDLDEE VLKLSSLGSGADN
Subjt:  TLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADN

Query:  KDTIDILRKSLVLCNRS
        KDTIDILRKSLV+ NRS
Subjt:  KDTIDILRKSLVLCNRS

XP_023006548.1 uncharacterized protein LOC111499239 isoform X1 [Cucurbita maxima]1.0e-4055.05Show/hide
Query:  LGSCKCCAEAMEVVGAQARANVCSSGLS--ILQMGRRNIVAPCASRPMWQKMLHGCIFSLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLN
        L S   C      +  Q     CS+G       M ++N VA   +R  +Q +            NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLN
Subjt:  LGSCKCCAEAMEVVGAQARANVCSSGLS--ILQMGRRNIVAPCASRPMWQKMLHGCIFSLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLN

Query:  STLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGAD
        STLE +GKDLKEL +E     DEVKK                       EEL+KST++CKRLH RSMALAKE+AAFKLVSE+DLDEE V KLSSLGSGAD
Subjt:  STLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGAD

Query:  NKDTIDILRKSLVLCNRS
        NKDTIDILRKSLVL NRS
Subjt:  NKDTIDILRKSLVLCNRS

XP_023006549.1 uncharacterized protein LOC111499239 isoform X2 [Cucurbita maxima]1.0e-4069.48Show/hide
Query:  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHV
        NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLNSTLE +GKDLKEL +E     DEVKK                       EEL+KST++CKRLH 
Subjt:  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHV

Query:  RSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRS
        RSMALAKE+AAFKLVSE+DLDEE V KLSSLGSGADNKDTIDILRKSLVL NRS
Subjt:  RSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRS

XP_038906710.1 uncharacterized protein LOC120092637 [Benincasa hispida]6.1e-4154.17Show/hide
Query:  LGSCKCCAEAMEVVGAQARANVCSSGLSILQMGRRNIVAPCASRPMWQKMLHGCIFSLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNST
        L S   C      +  Q     CS+       G++    P   +    K +    F      NDSML+KKP DWVE+DPELLRSEVKRLEM KVSVLNST
Subjt:  LGSCKCCAEAMEVVGAQARANVCSSGLSILQMGRRNIVAPCASRPMWQKMLHGCIFSLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNST

Query:  LEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADNK
        LE +GKDLKEL++E     DE+KK                       EEL+KST++CKRLH RSMALAKE+AAFKLVSE+DLDEE VLKLSSLG GADNK
Subjt:  LEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADNK

Query:  DTIDILRKSLVLCNRS
        D IDILRKSLVL NRS
Subjt:  DTIDILRKSLVLCNRS

TrEMBL top hitse value%identityAlignment
A0A6J1D0D3 uncharacterized protein LOC1110162231.9e-4053.92Show/hide
Query:  LGSCKCCAEAMEVVGAQARANVCSSGLSILQMGRRNIVAPCASRPMWQKMLHGCIF-SLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNS
        L S   C      +  Q     CSS       G++    P   +    K +    F S+ +  NDS+L++KP DWVERDPE LR EVKRLEM KVSVLNS
Subjt:  LGSCKCCAEAMEVVGAQARANVCSSGLSILQMGRRNIVAPCASRPMWQKMLHGCIF-SLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNS

Query:  TLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADN
         LE +GKDLK+L++E     DEVKK                       EELDKST++CKRLH RSMALAKE+AAFKLV+ELDLDEE VLKLSSLGSGADN
Subjt:  TLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADN

Query:  KDTIDILRKSLVLCNRS
        KDTIDILRKSLV+ NRS
Subjt:  KDTIDILRKSLVLCNRS

A0A6J1H2X0 uncharacterized protein LOC111459984 isoform X22.5e-4068.83Show/hide
Query:  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHV
        NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLNSTLE +GKDLKEL +E     DEVKK                       EEL+KST++C+RLH 
Subjt:  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHV

Query:  RSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRS
        RSMALAKE+AAFKLVSE+DLDEE V KLSSLGSGADNKDTIDILRKSLVL NRS
Subjt:  RSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRS

A0A6J1H385 uncharacterized protein LOC111459984 isoform X12.5e-4054.59Show/hide
Query:  LGSCKCCAEAMEVVGAQARANVCSSGLS--ILQMGRRNIVAPCASRPMWQKMLHGCIFSLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLN
        L S   C      +  Q     CS+G       M ++N VA   +R  +Q +            NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLN
Subjt:  LGSCKCCAEAMEVVGAQARANVCSSGLS--ILQMGRRNIVAPCASRPMWQKMLHGCIFSLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLN

Query:  STLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGAD
        STLE +GKDLKEL +E     DEVKK                       EEL+KST++C+RLH RSMALAKE+AAFKLVSE+DLDEE V KLSSLGSGAD
Subjt:  STLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGAD

Query:  NKDTIDILRKSLVLCNRS
        NKDTIDILRKSLVL NRS
Subjt:  NKDTIDILRKSLVLCNRS

A0A6J1L0F5 uncharacterized protein LOC111499239 isoform X25.1e-4169.48Show/hide
Query:  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHV
        NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLNSTLE +GKDLKEL +E     DEVKK                       EEL+KST++CKRLH 
Subjt:  NDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHV

Query:  RSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRS
        RSMALAKE+AAFKLVSE+DLDEE V KLSSLGSGADNKDTIDILRKSLVL NRS
Subjt:  RSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRS

A0A6J1L583 uncharacterized protein LOC111499239 isoform X15.1e-4155.05Show/hide
Query:  LGSCKCCAEAMEVVGAQARANVCSSGLS--ILQMGRRNIVAPCASRPMWQKMLHGCIFSLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLN
        L S   C      +  Q     CS+G       M ++N VA   +R  +Q +            NDSML+KKP DWVE+DPELLRSEV+RLEM KV+VLN
Subjt:  LGSCKCCAEAMEVVGAQARANVCSSGLS--ILQMGRRNIVAPCASRPMWQKMLHGCIFSLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLN

Query:  STLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGAD
        STLE +GKDLKEL +E     DEVKK                       EEL+KST++CKRLH RSMALAKE+AAFKLVSE+DLDEE V KLSSLGSGAD
Subjt:  STLEQRGKDLKELNKE-----DEVKK-----------------------EELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGAD

Query:  NKDTIDILRKSLVLCNRS
        NKDTIDILRKSLVL NRS
Subjt:  NKDTIDILRKSLVLCNRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G01270.1 RING/U-box superfamily protein2.3e-1743.87Show/hide
Query:  QNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELN----------KEDEVKK------------------EELDKSTIDCKRLH
        Q DS+ S K    +E DP LLR EVKRLE  KV  L S LE + K+  E++          KED+VK+                  EE  +    C +L 
Subjt:  QNDSMLSKKPTDWVERDPELLRSEVKRLEMKKVSVLNSTLEQRGKDLKELN----------KEDEVKK------------------EELDKSTIDCKRLH

Query:  VRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRS
         R++ALAKE+A+ KLVS+L L+E+ VLKL+ LG+ A  KDTID L KSLV+ NRS
Subjt:  VRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTGCCTGCGAGTCGCCCTGGGAGCGATCACTCTAAGGAGGACTTATCCATCGCACCAGCATGACACTGCCGCCGGAGATCCCATCAAACCGCCGTTGCACCTCAG
CCACGCCGAAGATCCCGTCCAACCGCCGCCGCGCCTCAGCCACCCGCACACGCCGCGAGAAACACCAACATCGCCGCCCTTTCTCGGTGAGTTTTCTCTCCCGTTTCAAT
CTCTGACTCTCTCTTTCTCTCTCGACACTATTTCCCTCTCCCGTAGCTCTCTTCCTTCGTCTTGTCCGGCGCACGCACTAACTTGGGCGACAGCGGCTCGTCGACGATTC
TACACGCGAACATACAGACGACGTGGGTTCGTCCTCGCGTTTCCAGCAACGTTGGGCTCTTGTAAGTGTTGTGCAGAGGCTATGGAGGTCGTGGGTGCTCAGGCTCGCGC
GAATGTTTGCAGTAGTGGTTTGAGTATTCTTCAAATGGGAAGAAGAAATATAGTTGCCCCATGTGCAAGCAGACCTATGTGGCAAAAGATGTTGCATGGCTGTATTTTCA
GTTTGTGGGAGATGCAAAATGATTCGATGCTTTCTAAGAAACCGACCGATTGGGTTGAGAGAGATCCGGAGTTGTTGAGAAGTGAGGTGAAGAGGCTGGAGATGAAGAAG
GTCTCGGTGCTTAATTCAACATTGGAGCAACGAGGGAAGGATCTCAAAGAGCTCAATAAGGAGGATGAAGTGAAGAAGGAAGAACTCGATAAATCAACTATTGACTGCAA
AAGGTTGCATGTAAGAAGTATGGCTTTGGCTAAAGAGATTGCAGCTTTCAAGTTGGTATCTGAACTGGATCTTGATGAAGAAGGGGTTCTAAAGCTTTCTTCATTGGGGA
GTGGAGCAGATAATAAAGATACAATTGACATTCTAAGGAAATCCTTAGTTCTGTGTAATAGGTCAGTTATCTCAATGTCACCTATGGAAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCTGCCTGCGAGTCGCCCTGGGAGCGATCACTCTAAGGAGGACTTATCCATCGCACCAGCATGACACTGCCGCCGGAGATCCCATCAAACCGCCGTTGCACCTCAG
CCACGCCGAAGATCCCGTCCAACCGCCGCCGCGCCTCAGCCACCCGCACACGCCGCGAGAAACACCAACATCGCCGCCCTTTCTCGGTGAGTTTTCTCTCCCGTTTCAAT
CTCTGACTCTCTCTTTCTCTCTCGACACTATTTCCCTCTCCCGTAGCTCTCTTCCTTCGTCTTGTCCGGCGCACGCACTAACTTGGGCGACAGCGGCTCGTCGACGATTC
TACACGCGAACATACAGACGACGTGGGTTCGTCCTCGCGTTTCCAGCAACGTTGGGCTCTTGTAAGTGTTGTGCAGAGGCTATGGAGGTCGTGGGTGCTCAGGCTCGCGC
GAATGTTTGCAGTAGTGGTTTGAGTATTCTTCAAATGGGAAGAAGAAATATAGTTGCCCCATGTGCAAGCAGACCTATGTGGCAAAAGATGTTGCATGGCTGTATTTTCA
GTTTGTGGGAGATGCAAAATGATTCGATGCTTTCTAAGAAACCGACCGATTGGGTTGAGAGAGATCCGGAGTTGTTGAGAAGTGAGGTGAAGAGGCTGGAGATGAAGAAG
GTCTCGGTGCTTAATTCAACATTGGAGCAACGAGGGAAGGATCTCAAAGAGCTCAATAAGGAGGATGAAGTGAAGAAGGAAGAACTCGATAAATCAACTATTGACTGCAA
AAGGTTGCATGTAAGAAGTATGGCTTTGGCTAAAGAGATTGCAGCTTTCAAGTTGGTATCTGAACTGGATCTTGATGAAGAAGGGGTTCTAAAGCTTTCTTCATTGGGGA
GTGGAGCAGATAATAAAGATACAATTGACATTCTAAGGAAATCCTTAGTTCTGTGTAATAGGTCAGTTATCTCAATGTCACCTATGGAAATCTGA
Protein sequenceShow/hide protein sequence
MRCLRVALGAITLRRTYPSHQHDTAAGDPIKPPLHLSHAEDPVQPPPRLSHPHTPRETPTSPPFLGEFSLPFQSLTLSFSLDTISLSRSSLPSSCPAHALTWATAARRRF
YTRTYRRRGFVLAFPATLGSCKCCAEAMEVVGAQARANVCSSGLSILQMGRRNIVAPCASRPMWQKMLHGCIFSLWEMQNDSMLSKKPTDWVERDPELLRSEVKRLEMKK
VSVLNSTLEQRGKDLKELNKEDEVKKEELDKSTIDCKRLHVRSMALAKEIAAFKLVSELDLDEEGVLKLSSLGSGADNKDTIDILRKSLVLCNRSVISMSPMEI