; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026624 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026624
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold6:18116947..18121700
RNA-Seq ExpressionSpg026624
SyntenySpg026624
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ05554.1 hypothetical protein Acr_17g0011260 [Actinidia rufa]4.9e-1051.67Show/hide
Query:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEF
        ME +N + +  PR++K+NP RR+KN+YC FH DHG++T++C QLK++ID LI+  YL++F
Subjt:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEF

MQL77781.1 hypothetical protein [Colocasia esculenta]8.4e-1034.21Show/hide
Query:  EIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPTDKDEESEAKGGKKIEEEEINQLMKRQR
        EIRN   L  P++++S+P +RD+N+YC FHRDHGH T  C QLKDEI+ LI+  YL  F  + E      RP  +D   E     +   +EIN +     
Subjt:  EIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPTDKDEESEAKGGKKIEEEEINQLMKRQR

Query:  IKPYWGKGYEDEETHVSVIDLPPTELKQLSDGKRRTPKRPCTAHEGPTRFSP
        +     +   D    V V+D P             +  RP      PTR  P
Subjt:  IKPYWGKGYEDEETHVSVIDLPPTELKQLSDGKRRTPKRPCTAHEGPTRFSP

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]2.2e-1039.32Show/hide
Query:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPTDKDEESEAKGGKKIEEEEINQLMKRQ
        MEI++  LL  P ++K+ P +R K QY LFHRDHGH+T++C  LK+E++ LIR+ YLKE+      D K  +  + D  S  +        EI  +M+ Q
Subjt:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPTDKDEESEAKGGKKIEEEEINQLMKRQ

Query:  RIKPYWGKGYEDEETHV
          K  +    EDE TH+
Subjt:  RIKPYWGKGYEDEETHV

XP_024029047.1 uncharacterized protein LOC112093867 [Morus notabilis]2.2e-1045.95Show/hide
Query:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPT
        M+I++ N+L  P  +K +P++RDK++YC FH+DHGH T +C QLK +I+ALI+   L+EF  +  A +K   PT
Subjt:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPT

XP_024029279.1 uncharacterized protein LOC112093925 [Morus notabilis]8.4e-1042.5Show/hide
Query:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPTDKDEES
        M+I++ NLL  P  +K +P++RDK++YC FH+DHGH T +C QLK +I+ALI+   L+EF  +  A ++   PT  ++++
Subjt:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPTDKDEES

TrEMBL top hitse value%identityAlignment
A0A6J1C8I1 uncharacterized protein LOC1110092926.9e-1048.53Show/hide
Query:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQ
        MEI++  LL  P ++K+ P +R K +YCLFH DHGH+T++C  LK+E++ LIR  YLKE+    +A Q
Subjt:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQ

A0A6J1DF96 uncharacterized protein LOC1110195443.4e-0940.96Show/hide
Query:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPTDKDEESEAK
        MEI++  L   P ++K++P++R K +YCLFHRDHGH+T +C  LK+E++  I   YLKE+      D K  + ++ D +S A+
Subjt:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPTDKDEESEAK

A0A6J1DP33 uncharacterized protein LOC1110228861.1e-1039.32Show/hide
Query:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPTDKDEESEAKGGKKIEEEEINQLMKRQ
        MEI++  LL  P ++K+ P +R K QY LFHRDHGH+T++C  LK+E++ LIR+ YLKE+      D K  +  + D  S  +        EI  +M+ Q
Subjt:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPTDKDEESEAKGGKKIEEEEINQLMKRQ

Query:  RIKPYWGKGYEDEETHV
          K  +    EDE TH+
Subjt:  RIKPYWGKGYEDEETHV

A0A6J1DWY0 uncharacterized protein LOC1110252931.2e-0941.76Show/hide
Query:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPTDKDEESEAKGGKKIEEE
        MEI++  LL  P ++K++  +R K +YCLFHRDHGH+T++C  LK+E++ LIR  YLKE+  + +A Q          E     G  IE E
Subjt:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPTDKDEESEAKGGKKIEEE

A0A7J0G436 Uncharacterized protein2.4e-1051.67Show/hide
Query:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEF
        ME +N + +  PR++K+NP RR+KN+YC FH DHG++T++C QLK++ID LI+  YL++F
Subjt:  MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTCGGAACACAAACCTCCTAAATGTACCAAGACAGCTGAAGTCCAACCCAGACAGAAGAGACAAGAACCAGTATTGCCTCTTTCATCGAGATCATGGGCACTC
AACCAAAAATTGTATCCAACTGAAGGATGAGATTGATGCACTGATTCGGAACGAGTATCTGAAGGAGTTCACCATTAAGGCCGAGGCCGACCAGAAATGGCTGAGGCCGA
CTGATAAGGATGAAGAATCAGAAGCAAAAGGTGGGAAAAAGATTGAAGAGGAAGAAATCAATCAACTCATGAAGCGACAAAGGATTAAACCATATTGGGGAAAGGGCTAC
GAGGATGAGGAAACCCATGTCTCCGTGATTGACCTGCCACCCACGGAGCTGAAGCAATTGAGCGACGGCAAAAGGAGAACCCCGAAACGCCCATGCACGGCACACGAAGG
ACCCACGAGATTCTCGCCGGCGGTCATGAACGTCGAACCCAACGCTCAACCTCCATCTTCTTCGACAATGCCGACCACGTCGAGGGAGATTCCGAGTTCGTCTACACCGA
GAAGATTCACGCGCGCCACTGCCGTCCGCCAAACCCAAAAACCCGCCGCTCAACAGTTTAGAAAACGCTCATGGGAGTGGTTTGCAATGATTCGGGAGATGGGAGCTCAG
AGACGTGCTGCTCTTGAAGAGGAAGCGAATAGGCGAGATGAAGAAGAAGCCGCTTGGAAGCTCTCGACAAGAAGGAACTTCATCGGTGCAAAGAAGAGGAGTCCCAAGAA
AAATGTGCCCGAAAAGCCGCTTGTGATTGGGCCCCTTAATACCACAAGAATACCTCCGGATGTGTTCAAAGATATAATCCGCCAAGCAGTGGCAAAGGCTCTTGTGATTG
CTGAAGGGTATAAGGCTAAACAAGATGCTTTGAAAGATATTGAAGCTGAGAGAGAGATGGAGAACCAACAAATGATGGAGGAAGATGATTTTGCAAAGAAAAGAGATGGG
GAAGAAAGCAAAGAGAAAAGAAGGAGAGAAGAAGAGCAAGAGGCCGAGAGGGTCAGATTAGCTGAAGAGGAAGAAAGAAGGTTAGGTGAAAGCCTCAAGAGGGCAGCCAT
TGAATTGCAACTCCTCAAGGAAAAAGAGAAGAGAAGAAGTAGAAGAAGAGGCCCAACAGGGGCAACTGAAGAAATTTTAGAAAAAGAAAAAGAAAGAAAAGTAGAGGATG
AAGGCCAGAATGTGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCCGAGGCCACCATGGAGCAGCCTGCTGATGAGGTTCTCGAAACTCTATTCAAAGATGATCCA
CCAGCAGCTGATAACACCTCTTCAGGAGAGAAGAGGGACGAAGAAGAAAAGGAAGACAAGGAGGTCGTGACCTCCAGTGACTCAGAGACAGTGACTCAGAGATCAAGGAG
TTGGATGATGACCAAGTTCCTATCTCTGCGACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTCGGAACACAAACCTCCTAAATGTACCAAGACAGCTGAAGTCCAACCCAGACAGAAGAGACAAGAACCAGTATTGCCTCTTTCATCGAGATCATGGGCACTC
AACCAAAAATTGTATCCAACTGAAGGATGAGATTGATGCACTGATTCGGAACGAGTATCTGAAGGAGTTCACCATTAAGGCCGAGGCCGACCAGAAATGGCTGAGGCCGA
CTGATAAGGATGAAGAATCAGAAGCAAAAGGTGGGAAAAAGATTGAAGAGGAAGAAATCAATCAACTCATGAAGCGACAAAGGATTAAACCATATTGGGGAAAGGGCTAC
GAGGATGAGGAAACCCATGTCTCCGTGATTGACCTGCCACCCACGGAGCTGAAGCAATTGAGCGACGGCAAAAGGAGAACCCCGAAACGCCCATGCACGGCACACGAAGG
ACCCACGAGATTCTCGCCGGCGGTCATGAACGTCGAACCCAACGCTCAACCTCCATCTTCTTCGACAATGCCGACCACGTCGAGGGAGATTCCGAGTTCGTCTACACCGA
GAAGATTCACGCGCGCCACTGCCGTCCGCCAAACCCAAAAACCCGCCGCTCAACAGTTTAGAAAACGCTCATGGGAGTGGTTTGCAATGATTCGGGAGATGGGAGCTCAG
AGACGTGCTGCTCTTGAAGAGGAAGCGAATAGGCGAGATGAAGAAGAAGCCGCTTGGAAGCTCTCGACAAGAAGGAACTTCATCGGTGCAAAGAAGAGGAGTCCCAAGAA
AAATGTGCCCGAAAAGCCGCTTGTGATTGGGCCCCTTAATACCACAAGAATACCTCCGGATGTGTTCAAAGATATAATCCGCCAAGCAGTGGCAAAGGCTCTTGTGATTG
CTGAAGGGTATAAGGCTAAACAAGATGCTTTGAAAGATATTGAAGCTGAGAGAGAGATGGAGAACCAACAAATGATGGAGGAAGATGATTTTGCAAAGAAAAGAGATGGG
GAAGAAAGCAAAGAGAAAAGAAGGAGAGAAGAAGAGCAAGAGGCCGAGAGGGTCAGATTAGCTGAAGAGGAAGAAAGAAGGTTAGGTGAAAGCCTCAAGAGGGCAGCCAT
TGAATTGCAACTCCTCAAGGAAAAAGAGAAGAGAAGAAGTAGAAGAAGAGGCCCAACAGGGGCAACTGAAGAAATTTTAGAAAAAGAAAAAGAAAGAAAAGTAGAGGATG
AAGGCCAGAATGTGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCCGAGGCCACCATGGAGCAGCCTGCTGATGAGGTTCTCGAAACTCTATTCAAAGATGATCCA
CCAGCAGCTGATAACACCTCTTCAGGAGAGAAGAGGGACGAAGAAGAAAAGGAAGACAAGGAGGTCGTGACCTCCAGTGACTCAGAGACAGTGACTCAGAGATCAAGGAG
TTGGATGATGACCAAGTTCCTATCTCTGCGACATTGA
Protein sequenceShow/hide protein sequence
MEIRNTNLLNVPRQLKSNPDRRDKNQYCLFHRDHGHSTKNCIQLKDEIDALIRNEYLKEFTIKAEADQKWLRPTDKDEESEAKGGKKIEEEEINQLMKRQRIKPYWGKGY
EDEETHVSVIDLPPTELKQLSDGKRRTPKRPCTAHEGPTRFSPAVMNVEPNAQPPSSSTMPTTSREIPSSSTPRRFTRATAVRQTQKPAAQQFRKRSWEWFAMIREMGAQ
RRAALEEEANRRDEEEAAWKLSTRRNFIGAKKRSPKKNVPEKPLVIGPLNTTRIPPDVFKDIIRQAVAKALVIAEGYKAKQDALKDIEAEREMENQQMMEEDDFAKKRDG
EESKEKRRREEEQEAERVRLAEEEERRLGESLKRAAIELQLLKEKEKRRSRRRGPTGATEEILEKEKERKVEDEGQNVTASGPHSEEGLAEATMEQPADEVLETLFKDDP
PAADNTSSGEKRDEEEKEDKEVVTSSDSETVTQRSRSWMMTKFLSLRH