CuGenDBv2

Gene ID	Spg026636
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Genome location	scaffold6:18204075..18204713
RNA-Seq Expression	Spg026636
Synteny	Spg026636
Gene Ontology terms	GO:0010258 - NADH dehydrogenase complex (plastoquinone) assembly (biological process) GO:0009570 - chloroplast stroma (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025435.1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 [Cucumis melo var. makuwa]

1.2e-98

91.55

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Query:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MASSHLH LSTPNP LLL QS P+FT PLQ+TSKR LSIK +SQDSESDPNFPSPDPKFSALN+PE+FPIEKRRRSEI+RQR+PT EIAKPEPPNFEIGW
Subjt:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_004152910.2 uncharacterized protein LOC101210146 [Cucumis sativus]

3.9e-97

89.2

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Query:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MASSHLH LSTPNP LLL QS P+FT PLQ+TSKR LSIKC+SQDSESDPNFPSPDP F ALN+PE+FPIEKRRRS+I+RQR+P+ EIAKPEPPNFEIGW
Subjt:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEI++EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_008452345.1 PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo]

4.7e-98

91.08

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Query:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MASSHLH LSTPNP LLL QS P+FT PLQ+TSKR LSIK +SQDSESDPNFPSPDP FSALN+PE+FPIEKRRRSEI+RQR+PT EIAKPEPPNFEIGW
Subjt:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_022932131.1 uncharacterized protein LOC111438454 [Cucurbita moschata]

1.8e-94

87.79

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Query:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MA  HLHLL  PNP LLL +SQPTFTNPLQ+T KR LS+KCSS+ SESDPNFPSP+P F ALN+PESFPIEKRRRSEIVRQRRP+K+I KPEPPNFEIGW
Subjt:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKV+DRMVTELFRVLKLMEMDLAMVKAAVKDETLSERL QAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_022985263.1 uncharacterized protein LOC111483306 [Cucurbita maxima]

2.4e-94

86.85

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Query:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MA  HLH+L  PNP LLL QSQPTFTNPLQ+T KR LS+KCSS+ SESDPNFPSPDP F ALN+PESFP+EKRRRSEIVRQRRP+KEI KPEPPNFEIGW
Subjt:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKV+DRMVTELFRVLKLMEMDLAMVKAAV+DETL++RL QAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6D8 Uncharacterized protein

1.9e-97

89.2

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Query:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MASSHLH LSTPNP LLL QS P+FT PLQ+TSKR LSIKC+SQDSESDPNFPSPDP F ALN+PE+FPIEKRRRS+I+RQR+P+ EIAKPEPPNFEIGW
Subjt:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEI++EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A1S3BT06 uncharacterized protein LOC103493403

2.3e-98

91.08

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Query:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MASSHLH LSTPNP LLL QS P+FT PLQ+TSKR LSIK +SQDSESDPNFPSPDP FSALN+PE+FPIEKRRRSEI+RQR+PT EIAKPEPPNFEIGW
Subjt:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A5D3C0F1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1

5.9e-99

91.55

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Query:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MASSHLH LSTPNP LLL QS P+FT PLQ+TSKR LSIK +SQDSESDPNFPSPDPKFSALN+PE+FPIEKRRRSEI+RQR+PT EIAKPEPPNFEIGW
Subjt:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKV++RMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A6J1EVI2 uncharacterized protein LOC111438454

8.9e-95

87.79

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Query:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MA  HLHLL  PNP LLL +SQPTFTNPLQ+T KR LS+KCSS+ SESDPNFPSP+P F ALN+PESFPIEKRRRSEIVRQRRP+K+I KPEPPNFEIGW
Subjt:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKV+DRMVTELFRVLKLMEMDLAMVKAAVKDETLSERL QAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A6J1JD53 uncharacterized protein LOC111483306

1.2e-94

86.85

Show/hide

Query:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW
        MA  HLH+L  PNP LLL QSQPTFTNPLQ+T KR LS+KCSS+ SESDPNFPSPDP F ALN+PESFP+EKRRRSEIVRQRRP+KEI KPEPPNFEIGW
Subjt:  MASSHLHLLSTPNP-LLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGW

Query:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
         RTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKV+DRMVTELFRVLKLMEMDLAMVKAAV+DETL++RL QAK
Subjt:  TRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G51100.1 unknown protein

1.3e-61

65.42

Show/hide

Query:  MASSHLHLLSTPNPLLLRQSQPTFTNP-LQLTSKRHLSIKCSSQDSESDPNFP-SPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIG
        MAS+   LL + +   L  + P  TN  ++ T+K   S KCSS     D     +P P+       E FPIEKRRRSEI+R  R  + I KPEPPNFEIG
Subjt:  MASSHLHLLSTPNPLLLRQSQPTFTNP-LQLTSKRHLSIKCSSQDSESDPNFP-SPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIG

Query:  WTRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQA
        W RTKEINLEKP G++IMDFLEK E LM REFGS ELLAK GEIVAERAREEAE+LRD+GKV++RMVTELFRVLKLMEMDLAMVKA+VKDETLS+R+ QA
Subjt:  WTRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQA

Query:  KARCRQAILVANSF
        +ARCRQAILVANSF
Subjt:  KARCRQAILVANSF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCTCACACCTCCATCTCCTCTCTACCCCAAACCCTCTTCTTCTCCGTCAATCTCAGCCCACTTTCACAAACCCATTACAACTTACATCGAAACGGCACCTCTC
AATCAAATGCAGCTCACAAGACTCCGAATCGGACCCCAACTTCCCATCCCCAGATCCGAAATTCAGCGCCTTAAACGAGCCAGAGAGCTTCCCAATCGAGAAGCGAAGAA
GATCCGAAATAGTCCGCCAAAGAAGACCCACAAAGGAAATCGCAAAGCCGGAGCCGCCAAACTTCGAAATCGGGTGGACAAGGACGAAAGAGATCAATTTGGAGAAGCCG
ATCGGGTGGATGATAATGGACTTTCTAGAGAAGCTTGAAGGGCTAATGGAGAGAGAATTTGGGTCGACGGAGTTACTGGCCAAAGTGGGAGAGATTGTGGCGGAGAGGGC
CAGAGAGGAGGCCGAGATCTTGCGAGACGATGGCAAAGTGGATGACAGAATGGTTACTGAGTTGTTTAGAGTTTTGAAGTTGATGGAGATGGATTTGGCTATGGTGAAGG
CCGCTGTGAAGGATGAGACCTTGAGTGAGCGGCTTGGGCAGGCCAAAGCTAGGTGCAGGCAAGCTATACTTGTTGCTAATTCTTTCTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MASSHLHLLSTPNPLLLRQSQPTFTNPLQLTSKRHLSIKCSSQDSESDPNFPSPDPKFSALNEPESFPIEKRRRSEIVRQRRPTKEIAKPEPPNFEIGWTRTKEINLEKP
IGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVDDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAKARCRQAILVANSF

Spg026636 (gene) of Sponge gourd (cylindrica) v1 genome