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Spg026651 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026651
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold6:16259429..16261226
RNA-Seq ExpressionSpg026651
SyntenySpg026651
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041324.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.3e-1676.67Show/hide
Query:  YIPLLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE
        YI LLTLSVLRDN+ VVS       KDDGSAGR PLHRRTSKRWLYWACPTQR  VMLV+
Subjt:  YIPLLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]5.4e-3569.42Show/hide
Query:  LLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSAESSRSSSSSTFQEGQRVSLE
        L TLSVLRDNDAVVSAG PHYDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL VPDTLPTSAESS S+S S         + 
Subjt:  LLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSAESSRSSSSSTFQEGQRVSLE

Query:  EDDVRWFHAIFRTKLTGGPGG
         DDV W H +FR K TGGPGG
Subjt:  EDDVRWFHAIFRTKLTGGPGG

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]5.4e-3569.42Show/hide
Query:  LLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSAESSRSSSSSTFQEGQRVSLE
        L TLSVLRDNDAVVSAG PHYDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL VPDTLPTSAESS S+S S         + 
Subjt:  LLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSAESSRSSSSSTFQEGQRVSLE

Query:  EDDVRWFHAIFRTKLTGGPGG
         DDV W H +FR K TGGPGG
Subjt:  EDDVRWFHAIFRTKLTGGPGG

TYK02787.1 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein [Cucumis melo var. makuwa]8.1e-1571.67Show/hide
Query:  YIPLLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE
        YI LLTLSVLRDN+ ++S       KDDGSAGR PLHRRTSKRWLYWAC TQR  VMLV+
Subjt:  YIPLLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE

TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]2.0e-1345.11Show/hide
Query:  PLLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEIELPVPDTLPTSAESSRSSSS-------------STFQEGQR
        PL TLSVLRDNDAVVS G  HYDKDDG  G    H       +             +EIEL VPDTLPTSAESS S+SS             S  +   R
Subjt:  PLLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEIELPVPDTLPTSAESSRSSSS-------------STFQEGQR

Query:  VSLE--------EDDVRWFHAIFRTKLTGGPGG
        +  E        E+DV W HA+FR K+ GG GG
Subjt:  VSLE--------EDDVRWFHAIFRTKLTGGPGG

TrEMBL top hitse value%identityAlignment
A0A5A7TCY8 DNA/RNA polymerases superfamily protein1.6e-1676.67Show/hide
Query:  YIPLLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE
        YI LLTLSVLRDN+ VVS       KDDGSAGR PLHRRTSKRWLYWACPTQR  VMLV+
Subjt:  YIPLLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE

A0A5A7VGQ5 Uncharacterized protein2.6e-3569.42Show/hide
Query:  LLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSAESSRSSSSSTFQEGQRVSLE
        L TLSVLRDNDAVVSAG PHYDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL VPDTLPTSAESS S+S S         + 
Subjt:  LLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSAESSRSSSSSTFQEGQRVSLE

Query:  EDDVRWFHAIFRTKLTGGPGG
         DDV W H +FR K TGGPGG
Subjt:  EDDVRWFHAIFRTKLTGGPGG

A0A5D3BG85 Uncharacterized protein2.6e-3569.42Show/hide
Query:  LLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSAESSRSSSSSTFQEGQRVSLE
        L TLSVLRDNDAVVSAG PHYDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL VPDTLPTSAESS S+S S         + 
Subjt:  LLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELPVPDTLPTSAESSRSSSSSTFQEGQRVSLE

Query:  EDDVRWFHAIFRTKLTGGPGG
         DDV W H +FR K TGGPGG
Subjt:  EDDVRWFHAIFRTKLTGGPGG

A0A5D3BTJ5 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein3.9e-1571.67Show/hide
Query:  YIPLLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE
        YI LLTLSVLRDN+ ++S       KDDGSAGR PLHRRTSKRWLYWAC TQR  VMLV+
Subjt:  YIPLLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE

A0A5D3CAC6 Uncharacterized protein9.6e-1445.11Show/hide
Query:  PLLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEIELPVPDTLPTSAESSRSSSS-------------STFQEGQR
        PL TLSVLRDNDAVVS G  HYDKDDG  G    H       +             +EIEL VPDTLPTSAESS S+SS             S  +   R
Subjt:  PLLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEIELPVPDTLPTSAESSRSSSS-------------STFQEGQR

Query:  VSLE--------EDDVRWFHAIFRTKLTGGPGG
        +  E        E+DV W HA+FR K+ GG GG
Subjt:  VSLE--------EDDVRWFHAIFRTKLTGGPGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGTATTGAGGAAGTTATGGGTGTTGGAAATTGTGGTATTGAATCTGGAAAATC
TGGAAAAGTAGAATGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGTGGCCCCACTACGACAAAGACGATGGGAGTGCTG
GGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTTCCTGATACG
CTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTCAACGTTCCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGTTTCACGCCATCTTTCG
GACTAAGCTAACAGGTGGTCCGGGAGGG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGTATTGAGGAAGTTATGGGTGTTGGAAATTGTGGTATTGAATCTGGAAAATC
TGGAAAAGTAGAATGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGTGGCCCCACTACGACAAAGACGATGGGAGTGCTG
GGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTTCCTGATACG
CTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTCAACGTTCCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGTTTCACGCCATCTTTCG
GACTAAGCTAACAGGTGGTCCGGGAGGG
Protein sequenceShow/hide protein sequence
MVFGMENRAQDFRAKQEDLCIEEVMGVGNCGIESGKSGKVECYIPLLTLSVLRDNDAVVSAGWPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEIELPVPDT
LPTSAESSRSSSSSTFQEGQRVSLEEDDVRWFHAIFRTKLTGGPGG