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Spg026662 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026662
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold6:16394774..16397359
RNA-Seq ExpressionSpg026662
SyntenySpg026662
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KZM94204.1 hypothetical protein DCAR_017447 [Daucus carota subsp. sativus]2.5e-0640.45Show/hide
Query:  FVNDLARATYLEMLKRDFLFERGFGDDLPHF----LRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAI
        F +D AR  +  ++ +  + ERGF   LP      L   I   GW+ FC  PE V L I+REFYAN  E      +VRG+ VD+S  AI
Subjt:  FVNDLARATYLEMLKRDFLFERGFGDDLPHF----LRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAI

PKC51568.1 hypothetical protein RhiirA1_483454, partial [Rhizophagus irregularis]8.6e-0739.56Show/hide
Query:  FVNDLARATYLEMLKRDFLFERGF------GDDLPHFLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAI
        F +D AR  +  ++ +  + ERGF      GD     L + I   GW+ FC  PE V L I+REFYAN  E      +VRG+ VD+S  AI
Subjt:  FVNDLARATYLEMLKRDFLFERGF------GDDLPHFLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAI

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.9e-0637.7Show/hide
Query:  KGVAEATVEGEEAETEEPRLPYERFVNDLARATYLEMLKRDFLFERGFGDD-------LPHFLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGF
        K VA    +  + ETE     YE  + +           R    E+GF  D       LP F+   IT H W QFCA PE   + +VREFYAN+ + E  
Subjt:  KGVAEATVEGEEAETEEPRLPYERFVNDLARATYLEMLKRDFLFERGFGDD-------LPHFLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGF

Query:  QAIVRGVVVDWSLGAINSLFNL
           VRGV V WS  AIN++F L
Subjt:  QAIVRGVVVDWSLGAINSLFNL

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]1.9e-0639.39Show/hide
Query:  RFVNDLARATYLEMLKRDFL-FERGFGDD------LPHFLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAINSLFNL
        +F ++ A A Y E +K   L  E+GF  +       P F+   I  H W  FCA  E   + +VREFYAN+ + E     V+GV V WS  AIN+LF L
Subjt:  RFVNDLARATYLEMLKRDFL-FERGFGDD------LPHFLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAINSLFNL

XP_017248025.1 PREDICTED: uncharacterized protein LOC108219212 [Daucus carota subsp. sativus]3.2e-0637.11Show/hide
Query:  ERFVNDLARATYLEMLKRDFLFERGFGDDLPHFLRAG----ITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAINSLFNL
        ++F    A+  ++ ++ +    ERGF   LP     G    I   GW+  C  PE V L+IVREFYAN   E+   AIVRG+ VD++  AI  L  +
Subjt:  ERFVNDLARATYLEMLKRDFLFERGFGDDLPHFLRAG----ITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAINSLFNL

TrEMBL top hitse value%identityAlignment
A0A164YA28 Uncharacterized protein1.2e-0640.45Show/hide
Query:  FVNDLARATYLEMLKRDFLFERGFGDDLPHF----LRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAI
        F +D AR  +  ++ +  + ERGF   LP      L   I   GW+ FC  PE V L I+REFYAN  E      +VRG+ VD+S  AI
Subjt:  FVNDLARATYLEMLKRDFLFERGFGDDLPHF----LRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAI

A0A2N0QKH9 Uncharacterized protein (Fragment)4.1e-0739.56Show/hide
Query:  FVNDLARATYLEMLKRDFLFERGF------GDDLPHFLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAI
        F +D AR  +  ++ +  + ERGF      GD     L + I   GW+ FC  PE V L I+REFYAN  E      +VRG+ VD+S  AI
Subjt:  FVNDLARATYLEMLKRDFLFERGF------GDDLPHFLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAI

A0A2P5BCG4 Uncharacterized protein (Fragment)9.2e-0737.7Show/hide
Query:  KGVAEATVEGEEAETEEPRLPYERFVNDLARATYLEMLKRDFLFERGFGDD-------LPHFLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGF
        K VA    +  + ETE     YE  + +           R    E+GF  D       LP F+   IT H W QFCA PE   + +VREFYAN+ + E  
Subjt:  KGVAEATVEGEEAETEEPRLPYERFVNDLARATYLEMLKRDFLFERGFGDD-------LPHFLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGF

Query:  QAIVRGVVVDWSLGAINSLFNL
           VRGV V WS  AIN++F L
Subjt:  QAIVRGVVVDWSLGAINSLFNL

A0A2P5EYL5 Uncharacterized protein9.2e-0739.39Show/hide
Query:  RFVNDLARATYLEMLKRDFL-FERGFGDD------LPHFLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAINSLFNL
        +F ++ A A Y E +K   L  E+GF  +       P F+   I  H W  FCA  E   + +VREFYAN+ + E     V+GV V WS  AIN+LF L
Subjt:  RFVNDLARATYLEMLKRDFL-FERGFGDD------LPHFLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAINSLFNL

W9R159 Uncharacterized protein1.6e-0634.62Show/hide
Query:  LKRDFLFERGFGDDLPHFLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAINSLFNL
        ++R F++ RG     P F+ + I  H W  FC  P    + +VR+FYAN +  E     +RG ++ ++  AINSL++L
Subjt:  LKRDFLFERGFGDDLPHFLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAINSLFNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGGAGTGAATTCCGTCTTGCGAAACTATGTCCCCAGCTATCTATTCGATCTTATCCCCAAAATGGTAGGCTTGTCGAGTCGGCGATGCTGGCCACTCTCACCCA
TGCAGATCAAAGGATAATCTCTCATAAACAGGAGTTCATAGATAGCTCAGGATTAAGAACGAGTTACCTAGGTCCATTAGGTCCCACTGAAGAAATTTCCAGCGATTATA
AGACAAGGAGGCTGCAGCGTTCTCGATCGTTGGAGCGTCGTTGGCGAAGAACGGTCAAGTCTACAACGAAGGTTCAGGCAGAGGTTGTGCCGGAACCACCGGGTCGTCGT
CGCCACAAACAAAAGGCGGGACGAATCAAGGTGGTTAGGACTGAAGCTCCATCTCCGTCAACAACGGAATCCGAGAAGGAGAATACAGAAAAAGAGGATCAAGAGAAAGA
GAAAACTGAAAAGAAGGCTGAAGAGGAGGCCATGATGAAGCAATCAGAAGACAAGGGCAAAGGAGTTGCTGAAGCAACAGTCGAAGGAGAGGAGGCTGAGACTGAGGAGC
CAAGACTGCCGTATGAGCGCTTCGTCAACGATCTTGCCAGAGCAACATATCTAGAGATGCTGAAGAGGGACTTCCTATTCGAAAGAGGATTCGGTGATGACTTGCCACAT
TTCTTACGAGCCGGGATTACAAACCACGGATGGGATCAGTTCTGCGCTAAACCAGAGCTTGTAAACTTGAATATTGTTCGCGAGTTCTATGCGAACATAGATGAAGAAGA
AGGTTTTCAAGCCATTGTCCGAGGGGTTGTTGTAGATTGGAGCCTAGGTGCAATAAACTCTCTATTCAATCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGGAGTGAATTCCGTCTTGCGAAACTATGTCCCCAGCTATCTATTCGATCTTATCCCCAAAATGGTAGGCTTGTCGAGTCGGCGATGCTGGCCACTCTCACCCA
TGCAGATCAAAGGATAATCTCTCATAAACAGGAGTTCATAGATAGCTCAGGATTAAGAACGAGTTACCTAGGTCCATTAGGTCCCACTGAAGAAATTTCCAGCGATTATA
AGACAAGGAGGCTGCAGCGTTCTCGATCGTTGGAGCGTCGTTGGCGAAGAACGGTCAAGTCTACAACGAAGGTTCAGGCAGAGGTTGTGCCGGAACCACCGGGTCGTCGT
CGCCACAAACAAAAGGCGGGACGAATCAAGGTGGTTAGGACTGAAGCTCCATCTCCGTCAACAACGGAATCCGAGAAGGAGAATACAGAAAAAGAGGATCAAGAGAAAGA
GAAAACTGAAAAGAAGGCTGAAGAGGAGGCCATGATGAAGCAATCAGAAGACAAGGGCAAAGGAGTTGCTGAAGCAACAGTCGAAGGAGAGGAGGCTGAGACTGAGGAGC
CAAGACTGCCGTATGAGCGCTTCGTCAACGATCTTGCCAGAGCAACATATCTAGAGATGCTGAAGAGGGACTTCCTATTCGAAAGAGGATTCGGTGATGACTTGCCACAT
TTCTTACGAGCCGGGATTACAAACCACGGATGGGATCAGTTCTGCGCTAAACCAGAGCTTGTAAACTTGAATATTGTTCGCGAGTTCTATGCGAACATAGATGAAGAAGA
AGGTTTTCAAGCCATTGTCCGAGGGGTTGTTGTAGATTGGAGCCTAGGTGCAATAAACTCTCTATTCAATCTCTAG
Protein sequenceShow/hide protein sequence
MGRSEFRLAKLCPQLSIRSYPQNGRLVESAMLATLTHADQRIISHKQEFIDSSGLRTSYLGPLGPTEEISSDYKTRRLQRSRSLERRWRRTVKSTTKVQAEVVPEPPGRR
RHKQKAGRIKVVRTEAPSPSTTESEKENTEKEDQEKEKTEKKAEEEAMMKQSEDKGKGVAEATVEGEEAETEEPRLPYERFVNDLARATYLEMLKRDFLFERGFGDDLPH
FLRAGITNHGWDQFCAKPELVNLNIVREFYANIDEEEGFQAIVRGVVVDWSLGAINSLFNL