; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026671 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026671
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAminoacyl-tRNA hydrolase
Genome locationscaffold6:18711076..18717239
RNA-Seq ExpressionSpg026671
SyntenySpg026671
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily
IPR042237 - Putative peptidyl-tRNA hydrolase PTRHD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585426.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-5670.21Show/hide
Query:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------
        M SVISASRFTFSI NS+RLC  ARVW  SS+ LRS N NS  FSS SMSES ES+S+LPLDDGG                     D    GSV      
Subjt:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------

Query:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLS
          V AIWLNKDDPHTSEYCS  NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKLS
Subjt:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLS

KAG7020347.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-5669.84Show/hide
Query:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------
        M SVISASRFTFSI NS+RLC  ARVW  SS+ LRS N NS  FSS SMSES ES+S+LPLDDGG                     D    GSV      
Subjt:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------

Query:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
          V AIWLNKDDPHTSEYCS  NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

XP_022951520.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita moschata]1.0e-5670.37Show/hide
Query:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------
        M SVISASRFTFSI NS RLC  ARVW  SS+ LRS N NS  FSS SMSES ESNS+LPLDDGG                     D    GSV      
Subjt:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------

Query:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
          V AIWLNKDDPHTSEYCS  NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

XP_023002512.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita maxima]1.3e-5669.84Show/hide
Query:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------
        M SVISASRFTFSI NS RLC  ARVW  SS+ L S N NS  FSS SMSES ESNS+LPLDDGG                     D    GSV      
Subjt:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------

Query:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
          V AIWLNKDDPHTSEYCS  NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

XP_023546189.1 putative peptidyl-tRNA hydrolase PTRHD1 [Cucurbita pepo subsp. pepo]4.1e-6172.22Show/hide
Query:  VSCATLCEDIMTSVISASRFTFSIPNSTRL--CPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG-----------------DRRCF
        VSCATLCEDIM SVISAS FTFSI  ST+L  C R+RVW SSSLSLRS NRNSN FSS SMSES ESNS  P DDG                   D    
Subjt:  VSCATLCEDIMTSVISASRFTFSIPNSTRL--CPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG-----------------DRRCF

Query:  GSV-------RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
        GSV        V A+WLNKDDPHTSEYCS  NIDSMHKVTLEVKGETQIVNLSEKLKA+SI HKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKL K
Subjt:  GSV-------RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

TrEMBL top hitse value%identityAlignment
A0A6J1GHT5 Aminoacyl-tRNA hydrolase1.1e-5670.59Show/hide
Query:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------
        M SVISASRFTFSI NS RLC  ARVW  SS+ LRS N NS  FSS SMSES ESNS+LPLDDGG                     D    GSV      
Subjt:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------

Query:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKL
          V AIWLNKDDPHTSEYCS  NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL
Subjt:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKL

A0A6J1GJ11 Aminoacyl-tRNA hydrolase5.0e-5770.37Show/hide
Query:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------
        M SVISASRFTFSI NS RLC  ARVW  SS+ LRS N NS  FSS SMSES ESNS+LPLDDGG                     D    GSV      
Subjt:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------

Query:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
          V AIWLNKDDPHTSEYCS  NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

A0A6J1HBR1 Aminoacyl-tRNA hydrolase5.5e-5670.74Show/hide
Query:  MTSVISASRFTFSIPNSTRL--CPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG-----------------DRRCFGSV-------
        M SVISASRFTFSI  ST+L  C R+RVW SSSLSLRS NRNSN FSSDSMSES ESNS  P DD                    D    GSV       
Subjt:  MTSVISASRFTFSIPNSTRL--CPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG-----------------DRRCFGSV-------

Query:  RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
         V A+WLNKDDPHT EYCS  NIDSMHKVTLEVKGETQIVNLSEKL+ANSI HKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKL K
Subjt:  RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase6.5e-5769.84Show/hide
Query:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------
        M SVISASRFTFSI NS RLC  ARVW  SS+ L S N NS  FSS SMSES ESNS+LPLDDGG                     D    GSV      
Subjt:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------

Query:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
          V AIWLNKDDPHTSEYCS  NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

A0A6J1KTS0 Aminoacyl-tRNA hydrolase1.5e-5670.05Show/hide
Query:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------
        M SVISASRFTFSI NS RLC  ARVW  SS+ L S N NS  FSS SMSES ESNS+LPLDDGG                     D    GSV      
Subjt:  MTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGG--------------------DRRCFGSV------

Query:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKL
          V AIWLNKDDPHTSEYCS  NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL
Subjt:  -RVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKL

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD11.3e-1447.06Show/hide
Query:  AIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
        A+ L++D PHT+ Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A +PYPK  VS + KK +L K
Subjt:  AIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD14.1e-1649.41Show/hide
Query:  AIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
        A+ L++D PHT+ Y     ++ M KV LE   ET +  L+E L+  +I HKLW+EQPENIPTC+A +PYPK  VS + KK +L K
Subjt:  AIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD11.1e-1344.71Show/hide
Query:  AIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
        A+  ++D PHT+ Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A +PYPK  V  + KK +L K
Subjt:  AIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein1.4e-3275.86Show/hide
Query:  VFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
        V AIW  KDDP T +YC   +IDSMHKVTLEVKGETQ++NLSEKLK   I HKLW+EQPENIPTC+ATKPYPKS VS+FFKKLKL K
Subjt:  VFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAAGGAGCTGACGAGGACAACCGGGGAAAAATCGGGCCAGGAGATGGAACCAAGAGGCAAAACCGGCAAGCGGGACGGGCCAAGACCAAAGGGGTCGGGCTTTTG
GCCCGACTCCCTACTCGGCCCGCTCGCGCGGGCAGAGCCTGTCCTGTTCCGTTTGGTCCCTACCGCCTCTGGCCGCCCCGGTTCCGCCTGGTTTGTCCCGAAACGCCTCC
GAATTCCTAAAAACCCTAGGAGCATGAGCAAGTATTTATACCCCTCTTCGCCACTGAAGAAGGGGACCCGAACTCAATTCTCGACTCTCTCCTCTTACTCTTTTGCTCTC
CTTCCGTTTTCTGACTTAAGCATTGGAGGCGGTGTGGCTAGCACCACACCGGGGTGCAGGTTTGTCGTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTT
GGTGGCACGTGAAGGTCAGTGTCATGAAGCTTGTCTTTGCATGGGAGAGGTCTATAAAGGGTGCTTGAATCAGATTCAAAGGGATGACAGCAATTTCATTAAGGCCCAAG
AGAATAGTAGGGAAGACTCTAGAGGTTGTCCAAGGAGCATAGGAGAAGAAAACACCACAAAGAGTTCCTCATTTGTGAGCTACAAAGACGATGACCGGAAAGAGGCTGAT
TTGGTAGCTTGTGGTTTGGAAAGTACCAAAAAATTCCTGGACCGACGGCTTCGCTTGAAATCTCAAAGTTCAGTAATCGGTAACACGGTTTCATGTGCTACTTTGTGTGA
AGATATCATGACATCTGTAATTTCAGCATCTCGATTCACATTTTCCATTCCCAATTCCACCAGGCTCTGTCCGAGGGCTAGGGTTTGGTCATCTTCTTCACTCAGTCTTC
GGTCTACGAATCGAAATTCCAATCCATTTAGCTCAGATTCGATGAGTGAATCCACGGAAAGTAATTCCATTCTGCCATTGGACGACGGCGGAGGAGACCGCCGATGTTTT
GGTTCAGTACGTGTTTTCGCCATTTGGTTGAACAAAGACGATCCCCACACTTCAGAGTACTGTAGTCGCGGAAACATCGATTCTATGCACAAGGTTACTCTCGAGGTGAA
GGGAGAAACCCAGATCGTTAACTTATCAGAAAAACTTAAAGCAAATTCAATCGTCCATAAACTCTGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCCACAAAGC
CCTACCCCAAATCTGTTGTATCAGCATTTTTTAAAAAGTTGAAACTCTCTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACAAGGAGCTGACGAGGACAACCGGGGAAAAATCGGGCCAGGAGATGGAACCAAGAGGCAAAACCGGCAAGCGGGACGGGCCAAGACCAAAGGGGTCGGGCTTTTG
GCCCGACTCCCTACTCGGCCCGCTCGCGCGGGCAGAGCCTGTCCTGTTCCGTTTGGTCCCTACCGCCTCTGGCCGCCCCGGTTCCGCCTGGTTTGTCCCGAAACGCCTCC
GAATTCCTAAAAACCCTAGGAGCATGAGCAAGTATTTATACCCCTCTTCGCCACTGAAGAAGGGGACCCGAACTCAATTCTCGACTCTCTCCTCTTACTCTTTTGCTCTC
CTTCCGTTTTCTGACTTAAGCATTGGAGGCGGTGTGGCTAGCACCACACCGGGGTGCAGGTTTGTCGTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTT
GGTGGCACGTGAAGGTCAGTGTCATGAAGCTTGTCTTTGCATGGGAGAGGTCTATAAAGGGTGCTTGAATCAGATTCAAAGGGATGACAGCAATTTCATTAAGGCCCAAG
AGAATAGTAGGGAAGACTCTAGAGGTTGTCCAAGGAGCATAGGAGAAGAAAACACCACAAAGAGTTCCTCATTTGTGAGCTACAAAGACGATGACCGGAAAGAGGCTGAT
TTGGTAGCTTGTGGTTTGGAAAGTACCAAAAAATTCCTGGACCGACGGCTTCGCTTGAAATCTCAAAGTTCAGTAATCGGTAACACGGTTTCATGTGCTACTTTGTGTGA
AGATATCATGACATCTGTAATTTCAGCATCTCGATTCACATTTTCCATTCCCAATTCCACCAGGCTCTGTCCGAGGGCTAGGGTTTGGTCATCTTCTTCACTCAGTCTTC
GGTCTACGAATCGAAATTCCAATCCATTTAGCTCAGATTCGATGAGTGAATCCACGGAAAGTAATTCCATTCTGCCATTGGACGACGGCGGAGGAGACCGCCGATGTTTT
GGTTCAGTACGTGTTTTCGCCATTTGGTTGAACAAAGACGATCCCCACACTTCAGAGTACTGTAGTCGCGGAAACATCGATTCTATGCACAAGGTTACTCTCGAGGTGAA
GGGAGAAACCCAGATCGTTAACTTATCAGAAAAACTTAAAGCAAATTCAATCGTCCATAAACTCTGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCCACAAAGC
CCTACCCCAAATCTGTTGTATCAGCATTTTTTAAAAAGTTGAAACTCTCTAAGTGA
Protein sequenceShow/hide protein sequence
MYKELTRTTGEKSGQEMEPRGKTGKRDGPRPKGSGFWPDSLLGPLARAEPVLFRLVPTASGRPGSAWFVPKRLRIPKNPRSMSKYLYPSSPLKKGTRTQFSTLSSYSFAL
LPFSDLSIGGGVASTTPGCRFVVLQATSSPSSTNLPLVAREGQCHEACLCMGEVYKGCLNQIQRDDSNFIKAQENSREDSRGCPRSIGEENTTKSSSFVSYKDDDRKEAD
LVACGLESTKKFLDRRLRLKSQSSVIGNTVSCATLCEDIMTSVISASRFTFSIPNSTRLCPRARVWSSSSLSLRSTNRNSNPFSSDSMSESTESNSILPLDDGGGDRRCF
GSVRVFAIWLNKDDPHTSEYCSRGNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK