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Spg026692 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026692
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold6:19818376..19830200
RNA-Seq ExpressionSpg026692
SyntenySpg026692
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046219.1 uncharacterized protein E6C27_scaffold284G00070 [Cucumis melo var. makuwa]1.9e-1570.77Show/hide
Query:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLE
        GK   +RLVE+EEQ+LYL +VPDS+RFLESRLEEIA KTD IDAV+GR++G+PI+ELL RV+ LE
Subjt:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLE

KAA0066842.1 uncharacterized protein E6C27_scaffold271G002070 [Cucumis melo var. makuwa]1.5e-1568.18Show/hide
Query:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLEE
        GK   +RLVE+EEQ+LYL EVPDS+R+LESRL+EI+TKT+ IDAV+GR++G+PI+ELL RV+ LEE
Subjt:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLEE

KAA0067252.1 uncharacterized protein E6C27_scaffold418G00690 [Cucumis melo var. makuwa]1.9e-1569.7Show/hide
Query:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLEE
        GK   +RLVEIEEQ+LYL EVPDS+R+LESRL+EI+ KTD IDAV+GR++G+PI+ELL RV+ LEE
Subjt:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLEE

TYK18977.1 uncharacterized protein E5676_scaffold418G00720 [Cucumis melo var. makuwa]1.9e-1570.77Show/hide
Query:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLE
        GK   +RLVE+EEQ+LYL +VPDS+RFLESRLEEIA KTD IDAV+GR++G+PI+ELL RV+ LE
Subjt:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLE

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]1.7e-1650.51Show/hide
Query:  MGKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLEEKGPLCHRRSEIELADLLVGESKCRTIAYEFEK
        +GK+H++RLVEIEE+LL+LRE+PD++R++ESRL+EI+TK D ID V+ R+DG+ I+EL++RVE LE+K     R   +E      GES   +IA+  E+
Subjt:  MGKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLEEKGPLCHRRSEIELADLLVGESKCRTIAYEFEK

TrEMBL top hitse value%identityAlignment
A0A5A7TY91 Retrotrans_gag domain-containing protein9.4e-1670.77Show/hide
Query:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLE
        GK   +RLVE+EEQ+LYL +VPDS+RFLESRLEEIA KTD IDAV+GR++G+PI+ELL RV+ LE
Subjt:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLE

A0A5A7VFV0 Retrotrans_gag domain-containing protein9.4e-1669.7Show/hide
Query:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLEE
        GK   +RLVEIEEQ+LYL EVPDS+R+LESRL+EI+ KTD IDAV+GR++G+PI+ELL RV+ LEE
Subjt:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLEE

A0A5D3D5Z0 Retrotrans_gag domain-containing protein9.4e-1670.77Show/hide
Query:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLE
        GK   +RLVE+EEQ+LYL +VPDS+RFLESRLEEIA KTD IDAV+GR++G+PI+ELL RV+ LE
Subjt:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLE

A0A5D3DXL5 Uncharacterized protein7.2e-1668.18Show/hide
Query:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLEE
        GK   +RLVE+EEQ+LYL EVPDS+R+LESRL+EI+TKT+ IDAV+GR++G+PI+ELL RV+ LEE
Subjt:  GKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLEE

A0A6J1DLQ6 uncharacterized protein LOC1110223208.5e-1750.51Show/hide
Query:  MGKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLEEKGPLCHRRSEIELADLLVGESKCRTIAYEFEK
        +GK+H++RLVEIEE+LL+LRE+PD++R++ESRL+EI+TK D ID V+ R+DG+ I+EL++RVE LE+K     R   +E      GES   +IA+  E+
Subjt:  MGKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLEEKGPLCHRRSEIELADLLVGESKCRTIAYEFEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAAGACCCATGTTGAACGACTTGTAGAAATCGAAGAGCAGCTGCTCTACTTGAGAGAGGTCCCAGATTCAGTTCGGTTCTTGGAATCTCGCCTGGAAGAGATTGC
GACCAAGACGGACAAAATTGATGCAGTATCTGGCCGCCTGGATGGAATGCCCATCAAAGAGTTATTAATGAGGGTTGAGAACCTCGAAGAAAAAGGCCCTTTGTGCCACC
GGCGATCCGAAATCGAGTTGGCTGACTTACTCGTGGGCGAGAGTAAGTGCCGCACAATCGCTTACGAGTTCGAAAAGAGTGCGATTGTGACACTGCGCATGGCGCTTGTG
GGTTGGTTGACTTATAGAAATGTCTTTTTGCTTAACAGCTTGCGTGAAGACCCCCCCTTGCCGTTTCTCAGCCGCCGCCCAGCCGTGAAGGTCGACCCAGCCCCCGTAGT
CTCTTCAGTCGCCGTTGCCACGCCGCCGCCGCTGTCGTCGCGTTGCCCAACCATTCGCGGGTCTCTCCCTCTCTCCGCATCTCGCGTCCTAGCAGCTCGAAGCTTCAGTT
CCTTGCGTTTTCGCCTCTGTCCAACAGCTGTTTCGGGCGTTTTCAAGGTCGTTTGGCATTTTTGCTGGAAGCTCGTTTTGGAGCGTGATTGTGCAGTCCCAGCTAGCGTT
GATGTTGCAAGTTTGGATGACGAGCTGGACGTTAGTGAGGAAGAGGAGAACTTCGAGGAGGAACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAAGACCCATGTTGAACGACTTGTAGAAATCGAAGAGCAGCTGCTCTACTTGAGAGAGGTCCCAGATTCAGTTCGGTTCTTGGAATCTCGCCTGGAAGAGATTGC
GACCAAGACGGACAAAATTGATGCAGTATCTGGCCGCCTGGATGGAATGCCCATCAAAGAGTTATTAATGAGGGTTGAGAACCTCGAAGAAAAAGGCCCTTTGTGCCACC
GGCGATCCGAAATCGAGTTGGCTGACTTACTCGTGGGCGAGAGTAAGTGCCGCACAATCGCTTACGAGTTCGAAAAGAGTGCGATTGTGACACTGCGCATGGCGCTTGTG
GGTTGGTTGACTTATAGAAATGTCTTTTTGCTTAACAGCTTGCGTGAAGACCCCCCCTTGCCGTTTCTCAGCCGCCGCCCAGCCGTGAAGGTCGACCCAGCCCCCGTAGT
CTCTTCAGTCGCCGTTGCCACGCCGCCGCCGCTGTCGTCGCGTTGCCCAACCATTCGCGGGTCTCTCCCTCTCTCCGCATCTCGCGTCCTAGCAGCTCGAAGCTTCAGTT
CCTTGCGTTTTCGCCTCTGTCCAACAGCTGTTTCGGGCGTTTTCAAGGTCGTTTGGCATTTTTGCTGGAAGCTCGTTTTGGAGCGTGATTGTGCAGTCCCAGCTAGCGTT
GATGTTGCAAGTTTGGATGACGAGCTGGACGTTAGTGAGGAAGAGGAGAACTTCGAGGAGGAACCCTAA
Protein sequenceShow/hide protein sequence
MGKTHVERLVEIEEQLLYLREVPDSVRFLESRLEEIATKTDKIDAVSGRLDGMPIKELLMRVENLEEKGPLCHRRSEIELADLLVGESKCRTIAYEFEKSAIVTLRMALV
GWLTYRNVFLLNSLREDPPLPFLSRRPAVKVDPAPVVSSVAVATPPPLSSRCPTIRGSLPLSASRVLAARSFSSLRFRLCPTAVSGVFKVVWHFCWKLVLERDCAVPASV
DVASLDDELDVSEEEENFEEEP