CuGenDBv2

Gene ID	Spg026713
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	WD repeat-containing protein 25
Genome location	scaffold6:18787191..18789840
RNA-Seq Expression	Spg026713
Synteny	Spg026713
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600751.1 WD repeat-containing protein 25, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-29

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Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        ME LF+AYSN SDED +E+E +PKRLALPS  S RP  + S+FQP FRP +C DS+SEPQK IMVPGRY+SKRERAL+SS PVSRAPESFLNPSVQSS V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV

KAG7031391.1 WD repeat-containing protein 25, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.0e-29

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Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        ME LF+AYSN SDED +E+E +PKRLALPS  S RP  + S+FQP FRP +C DS+SEPQK IMVPGRY+SKRERAL+SS PVSRAPESFLNPSVQSS V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV

XP_022941667.1 WD repeat-containing protein 25 [Cucurbita moschata]

2.2e-29

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Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        ME LF+AYSN SDED +E+E +PKRLALPS  S RP  + S+FQP FRP H  DS+SEPQK IMVPGRY+SKRERAL+SS PVSRAPESFLNPSVQSS V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV

XP_022992622.1 WD repeat-containing protein 25 [Cucurbita maxima]

3.5e-30

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Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        ME LF+AYSN SDED EE+E +PKRLALPS  S RP  + S+FQP FRP HC DS+SEPQK IMVPGRY+SKRERAL+SS PVSRAPESFLNPSVQ S V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV

XP_038903500.1 WD repeat-containing protein 25 [Benincasa hispida]

3.2e-28

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Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        MESLFKAYSNASD+  EE+E KPKRLA  S PS RP  +  KF+P FRP HC  S+SE Q+GIMVPGRYVSKRERALLSS PVSRAPES LNP++QSS V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L2H7 Uncharacterized protein

2.7e-28

72.16

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Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQS
        MESLFKAYSN+SD+  EE+E KPKRLAL S PS RP  +P KF+P  R LHCSDS+SE  + IMVPGRYVSKRERALLSSTP SRAP+SF NPS Q+
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQS

A0A1S4DZ03 WD repeat-containing protein 25 isoform X1

7.8e-28

70.1

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Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQS
        MESLFKAYSN+SD+  EE+E KPKRLAL S PS RP  +P KF+P  RP HCS S+ +P + IMVPGRY+SKRERALLSS P SRAPESF NPS+QS
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQS

A0A5A7U0J5 WD repeat-containing protein 25 isoform X2

7.8e-28

70.1

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Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQS
        MESLFKAYSN+SD+  EE+E KPKRLAL S PS RP  +P KF+P  RP HCS S+ +P + IMVPGRY+SKRERALLSS P SRAPESF NPS+QS
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQS

A0A6J1FN47 WD repeat-containing protein 25

1.1e-29

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Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        ME LF+AYSN SDED +E+E +PKRLALPS  S RP  + S+FQP FRP H  DS+SEPQK IMVPGRY+SKRERAL+SS PVSRAPESFLNPSVQSS V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV

A0A6J1JQD9 WD repeat-containing protein 25

1.7e-30

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Query:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV
        ME LF+AYSN SDED EE+E +PKRLALPS  S RP  + S+FQP FRP HC DS+SEPQK IMVPGRY+SKRERAL+SS PVSRAPESFLNPSVQ S V
Subjt:  MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G54520.1 Transducin/WD40 repeat-like superfamily protein

8.3e-06

34.43

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Query:  MESLFKAYSNASDEDGE---EEEHKPKRLALPSPPSNR--PVSQPSKFQPKFRPLHCSDSSSEPQKG----------IMVPGRYVSKRERALLSSTPVSR
        M+ +  +Y+N SD++ E    E    K  A PS PS R  PV +  +++P  RP     S SE Q            + VPGRYVSKRER+LL+S     
Subjt:  MESLFKAYSNASDEDGE---EEEHKPKRLALPSPPSNR--PVSQPSKFQPKFRPLHCSDSSSEPQKG----------IMVPGRYVSKRERALLSSTPVSR

Query:  APES--------FLNPSVQSSI
         P+         + +P+V  SI
Subjt:  APES--------FLNPSVQSSI

Sequences

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CDS sequence

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ATGGAATCTTTGTTCAAAGCTTACTCAAATGCTTCTGACGAAGACGGTGAAGAAGAAGAACATAAGCCCAAGCGTTTGGCCCTCCCCTCTCCACCTTCAAATAGACCCGT
ATCCCAACCTTCCAAATTCCAGCCGAAGTTCCGACCATTGCATTGCTCGGACTCGAGTTCAGAGCCTCAAAAGGGGATTATGGTTCCTGGACGCTATGTTTCCAAGAGAG
AGCGAGCACTCCTGAGTTCAACTCCAGTTTCTAGGGCTCCGGAATCATTTCTGAATCCATCCGTCCAATCTTCAATTGTGTTTTGGGGAATGCTGGGTCTGATGGAAACT
GGAGTTAGTTCGTTGGAAGAGAAGATGGTGGAGAAACAATTGGGAGTGGAGGAGAAGATGGATATGAAGTTAGGTTAG

mRNA sequence

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Protein sequence

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MESLFKAYSNASDEDGEEEEHKPKRLALPSPPSNRPVSQPSKFQPKFRPLHCSDSSSEPQKGIMVPGRYVSKRERALLSSTPVSRAPESFLNPSVQSSIVFWGMLGLMET
GVSSLEEKMVEKQLGVEEKMDMKLG

Spg026713 (gene) of Sponge gourd (cylindrica) v1 genome