; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026741 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026741
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionWD repeat-containing protein 25
Genome locationscaffold6:18803571..18805531
RNA-Seq ExpressionSpg026741
SyntenySpg026741
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR019775 - WD40 repeat, conserved site
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011650540.1 WD repeat-containing protein 25 isoform X1 [Cucumis sativus]6.1e-12474.19Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES
        MPKRMSV LDCH K VN+VQWSP+HAHLLASAAMDHTICIWNVWST QKLAFKS+ H+AAVKDVQWSQQGLS+LSCGYDCASRLIDVEKGTEVGVFKE+ 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES

Query:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------
        GVAVVKFHPNNP+LFLSGGLKGSL+MWDMRIGK+VNKYNRRLGPILDVEFTPNSNQFISSSDVS SNSSESSII+WDVTREVPLSYQ             
Subjt:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------

Query:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC
              F+              PPF   ++                  LDAKQIISGSSDGSIYFYDY+SSL+IHKLKASEQACID+AIHPTLPNVIA+C
Subjt:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC

Query:  SWNGNISLFQ
        SWNG IS+FQ
Subjt:  SWNGNISLFQ

XP_011650541.1 WD repeat-containing protein 25 isoform X3 [Cucumis sativus]6.1e-12474.19Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES
        MPKRMSV LDCH K VN+VQWSP+HAHLLASAAMDHTICIWNVWST QKLAFKS+ H+AAVKDVQWSQQGLS+LSCGYDCASRLIDVEKGTEVGVFKE+ 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES

Query:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------
        GVAVVKFHPNNP+LFLSGGLKGSL+MWDMRIGK+VNKYNRRLGPILDVEFTPNSNQFISSSDVS SNSSESSII+WDVTREVPLSYQ             
Subjt:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------

Query:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC
              F+              PPF   ++                  LDAKQIISGSSDGSIYFYDY+SSL+IHKLKASEQACID+AIHPTLPNVIA+C
Subjt:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC

Query:  SWNGNISLFQ
        SWNG IS+FQ
Subjt:  SWNGNISLFQ

XP_022941667.1 WD repeat-containing protein 25 [Cucurbita moschata]2.7e-12474.19Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES
        MPKRMSV+LDCHTK VNAVQWSP+HAHLLASAAMD+TICIWN+WSTEQKLAFKSSIH+AAVKDV+WSQQGLSILSCGYDC+SRLIDVEKGTEVG+FKE+ 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES

Query:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------
        GVAVVKFHPNNPS+FLSGGLKGSL+MWD+RIGKVVNKYNRRLGPILDVEFTPN NQFISSSDVS+SNSSESS+IVWDVTREVPLSYQ             
Subjt:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------

Query:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC
              F+              PPF   ++                  LD KQIISGSSDGSIYFYDY+SSL+IHKLKASEQAC DVAIHPTLPNVIA+C
Subjt:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC

Query:  SWNGNISLFQ
        SWNGNIS+FQ
Subjt:  SWNGNISLFQ

XP_023526021.1 WD repeat-containing protein 25 [Cucurbita pepo subsp. pepo]2.7e-12474.19Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES
        MPKRMSV+LDCHTK VNAVQWSP+HAHLLASAAMD+TICIWN+WSTEQKLAFKSSIH+AAVKDV+WSQQGLS+LSCGYDC+SRLIDVEKGTEVGVFKE+ 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES

Query:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------
        GVAVVKFHPNNPSLFLSGGLKGSL+MWD+RIGKVVNKYNRRLGPILDVEFTPN NQFISSSDVS+SNSSESS+IVWDVTREVPLSYQ             
Subjt:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------

Query:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC
              F+              PPF   ++                  LD KQIISGSSDGSIYFYDY+SSL+IHKLKASEQAC DVAIHPTLPNVIA+C
Subjt:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC

Query:  SWNGNISLFQ
        SW+GNIS+FQ
Subjt:  SWNGNISLFQ

XP_031738525.1 WD repeat-containing protein 25 isoform X4 [Cucumis sativus]6.1e-12474.19Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES
        MPKRMSV LDCH K VN+VQWSP+HAHLLASAAMDHTICIWNVWST QKLAFKS+ H+AAVKDVQWSQQGLS+LSCGYDCASRLIDVEKGTEVGVFKE+ 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES

Query:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------
        GVAVVKFHPNNP+LFLSGGLKGSL+MWDMRIGK+VNKYNRRLGPILDVEFTPNSNQFISSSDVS SNSSESSII+WDVTREVPLSYQ             
Subjt:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------

Query:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC
              F+              PPF   ++                  LDAKQIISGSSDGSIYFYDY+SSL+IHKLKASEQACID+AIHPTLPNVIA+C
Subjt:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC

Query:  SWNGNISLFQ
        SWNG IS+FQ
Subjt:  SWNGNISLFQ

TrEMBL top hitse value%identityAlignment
A0A0A0L568 WD_REPEATS_REGION domain-containing protein1.2e-10672.92Show/hide
Query:  MDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGK
        MDHTICIWNVWST QKLAFKS+ H+AAVKDVQWSQQGLS+LSCGYDCASRLIDVEKGTEVGVFKE+ GVAVVKFHPNNP+LFLSGGLKGSL+MWDMRIGK
Subjt:  MDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGK

Query:  VVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA-----------------CFV--------------PPFSSLQF---
        +VNKYNRRLGPILDVEFTPNSNQFISSSDVS SNSSESSII+WDVTREVPLSYQ                   F+              PPF   ++   
Subjt:  VVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA-----------------CFV--------------PPFSSLQF---

Query:  ---------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATCSWNGNISLFQ
                       LDAKQIISGSSDGSIYFYDY+SSL+IHKLKASEQACID+AIHPTLPNVIA+CSWNG IS+FQ
Subjt:  ---------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATCSWNGNISLFQ

A0A1S4DZ03 WD repeat-containing protein 25 isoform X11.9e-12374.19Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES
        MPKRMSVTLDCH K VN+VQWSP+HAHLLASAAMDHTICIWNVWST QKLA KSS H+AAVKDVQWSQQGLS+LSCGYDCASRLIDVEKGTEVGVFKE+ 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES

Query:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------
        GVAVVKFHPNNP+LFLSGGLKGSL+MWDMRIGK+VNKYNRRLG ILD+EFTPNSNQFISSSDVS SNSSESSIIVWDVTREVPLSYQ             
Subjt:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------

Query:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC
              F+              PPF   ++                  LDAKQIISGSSDGSIYFYDY+SSL+IHKLKASEQACID+AIHPTLPNVIA+C
Subjt:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC

Query:  SWNGNISLFQ
        SWNG IS+FQ
Subjt:  SWNGNISLFQ

A0A6J1CMQ5 WD repeat-containing protein 254.1e-11870.97Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES
        MP+RMSVTLDCHTK VNA+QWSP++AHLLASAAMDHTIC+WNVW+TEQKLAFKS+IH+AAVK+VQWSQ+GLSILSCGYD ASRLIDVEKGTEVG FKE+ 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES

Query:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------
        GVAVVKFHPNNP+LFLSGGLKGSL+MWD RIGKVVNKYNRRLGPILDVEFTP+SNQFISSSDVSASNSSESSIIVWD+TREVPLSYQ             
Subjt:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------

Query:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC
              F+              PPF   ++                  LD KQIISGSSDGS+YFYDY+SSL++ K KA E ACIDVAIHP LPNVIA+C
Subjt:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC

Query:  SWNGNISLFQ
        SWNGNI++FQ
Subjt:  SWNGNISLFQ

A0A6J1FN47 WD repeat-containing protein 251.3e-12474.19Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES
        MPKRMSV+LDCHTK VNAVQWSP+HAHLLASAAMD+TICIWN+WSTEQKLAFKSSIH+AAVKDV+WSQQGLSILSCGYDC+SRLIDVEKGTEVG+FKE+ 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES

Query:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------
        GVAVVKFHPNNPS+FLSGGLKGSL+MWD+RIGKVVNKYNRRLGPILDVEFTPN NQFISSSDVS+SNSSESS+IVWDVTREVPLSYQ             
Subjt:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------

Query:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC
              F+              PPF   ++                  LD KQIISGSSDGSIYFYDY+SSL+IHKLKASEQAC DVAIHPTLPNVIA+C
Subjt:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC

Query:  SWNGNISLFQ
        SWNGNIS+FQ
Subjt:  SWNGNISLFQ

A0A6J1JQD9 WD repeat-containing protein 251.9e-12373.55Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES
        MPKRMSV+LDCHTK VNAVQWSP+HAHLLASAAMD+TICIWN+WSTEQKLAFKSSIH+AAVKDV+WSQQGLSILSCGYDC+SRLIDVEKGTE+GVFKE+ 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES

Query:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------
        GVAVVKFHPN+PSLFLSGG+KGSL+MWD+RIGKVVNKYNRRLGPILDVEFTPN NQFISSSDVS+SNSSESS+IVWDVTREVPLSYQ             
Subjt:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQA------------

Query:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC
              F+              PPF   ++                  LD KQIISGSSDGSIYFYDY+SSL+IHKLKASEQAC DVAIHPTLPNVIA+C
Subjt:  -----CFV--------------PPFSSLQF------------------LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC

Query:  SWNGNISLFQ
        SWNGNI +FQ
Subjt:  SWNGNISLFQ

SwissProt top hitse value%identityAlignment
E9Q349 WD repeat-containing protein 251.1e-3830.55Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPT--HAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKE
        +PK++   L  H  PVN++QW P    +H+L SA+MD T  +WN   +   L    S+H  AV+  +WS  G  ILS G+D A  L D+E GT+V   + 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPT--HAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKE

Query:  ESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ------AC---
        +  V  +KFHP + ++FL GG    ++ WDMR GKVV  Y   +   LD+ F    ++F+SS+D S  +S++ +II WD      +S Q       C   
Subjt:  ESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ------AC---

Query:  ----------------FVPPFSSLQFLDAKQ------------------------IISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIA
                        ++  FSS+      +                        +++GS+DG +  + + ++     L+   QAC+    HP LP+V+ 
Subjt:  ----------------FVPPFSSLQFLDAKQ------------------------IISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIA

Query:  TCSWNGNISLF
        TCSW G+I ++
Subjt:  TCSWNGNISLF

O43071 Pre-mRNA-processing factor 178.5e-2030.18Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES
        +PK+   T   HTK ++ +++ P   HLL S +MD+ I IW V+  ++ L      H   ++D+ +SQ G S LS  +D   +L D E G  +  F  + 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES

Query:  GVAVVKFH--PNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACFV---PPFS
            VKF   P+ P+ FL+G     +  +D+R   +V  Y+  LG I  + F  N  +F+++SD       +SS+  W+    VP+ + A       P  
Subjt:  GVAVVKFH--PNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACFV---PPFS

Query:  SLQFLDAKQIISGSSDGSIYFY
        +L+  + K I   S D  IY Y
Subjt:  SLQFLDAKQIISGSSDGSIYFY

O60508 Pre-mRNA-processing factor 173.0e-2525.56Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES
        +PK+       HTK V+AV+  P   HLL S +MD  I +W V+  E++       H  AV+D+ ++  G   LS  YD   +L D E G  +  F    
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES

Query:  GVAVVKFHP--NNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACFVPPFSSL-
            VKF+P  +  +LF++G     +  WD+R G++V +Y+R LG +  + F   + +F+S+SD       + S+ VW+   ++P+ ++    P   S+ 
Subjt:  GVAVVKFHP--NNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACFVPPFSSL-

Query:  ------------------QFL--------------------------------DAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNV
                          Q L                                D   +ISG  +G +  +D++++ +  + KA ++ CI    HP   + 
Subjt:  ------------------QFL--------------------------------DAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNV

Query:  IATCSWNGNISLF
        + TC W+G I L+
Subjt:  IATCSWNGNISLF

Q64LD2 WD repeat-containing protein 254.5e-3728.94Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSP--THAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKE
        +P+++   L  H  PVN +QW P  + +H+L S +MD T  +WN   +   L    S+H  AV+  +W+  G  ILS G+D A  L D+E GT++   + 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSP--THAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKE

Query:  ESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQAC---FVPPFS
        +  +  +KFHP + ++FL GG    ++ WD+R GKV+  Y   +   LD+ F    ++F+SS+D S  +S++ +II WD      +S Q     F  P  
Subjt:  ESGVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQAC---FVPPFS

Query:  SLQ-----FL-----------------------------------------DAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIA
        +L      FL                                             +++GS+DG +  Y + ++     L+   QAC+    HP LP+V+A
Subjt:  SLQ-----FL-----------------------------------------DAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIA

Query:  TCSWNGNISLF
        TCSW G++ ++
Subjt:  TCSWNGNISLF

Q9DC48 Pre-mRNA-processing factor 173.9e-2525.56Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES
        +PK+       HTK V+AV+  P   HLL S +MD  I +W V+   + L      H  AV+D+ ++  G   LS  YD   +L D E G  +  F    
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES

Query:  GVAVVKFHP--NNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACFVPPFSSL-
            VKF+P  +  +LF++G     +  WD+R G++V +Y+R LG +  + F   + +F+S+SD       + S+ VW+   ++P+ ++    P   S+ 
Subjt:  GVAVVKFHP--NNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACFVPPFSSL-

Query:  ------------------QFL--------------------------------DAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNV
                          Q L                                D   +ISG  +G +  +D++++ +  + KA ++ CI    HP   + 
Subjt:  ------------------QFL--------------------------------DAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNV

Query:  IATCSWNGNISLF
        + TC W+G I L+
Subjt:  IATCSWNGNISLF

Arabidopsis top hitse value%identityAlignment
AT1G10580.1 Transducin/WD40 repeat-like superfamily protein1.5e-2725.91Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES
        +PKR+  T   HTK V+A+++ P   HLL SA MD  + IW+V+++ + +      H  AV+D+ +S  G   L+ GYD   +  D E G  +  F    
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES

Query:  GVAVVKFHPNN--PSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVS----------------------------------
           VVK +P++   ++ L+G     +  WD+  G+V  +Y++ LG +  + F  N+ +F++SSD                                    
Subjt:  GVAVVKFHPNN--PSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVS----------------------------------

Query:  --ASNSSESSIIVWDVTREVPLSYQACFVPPF-----SSLQFL-DAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATCSWNGN
          A+ S ++ I+++       L+ +  F           + F  D + ++SG  +G  +F+D++S  +   LK     CI    HP   + +ATC W+G 
Subjt:  --ASNSSESSIIVWDVTREVPLSYQACFVPPF-----SSLQFL-DAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATCSWNGN

Query:  I
        I
Subjt:  I

AT1G11160.1 Transducin/WD40 repeat-like superfamily protein2.7e-1323.61Show/hide
Query:  HTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFK-EESGVAVVKFHPN
        H+  VN +      + LL +   D+ + +W++  T   ++     H + V  V ++ + + +L+       +L D+E+   V  F    S  + V+FHP 
Subjt:  HTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFK-EESGVAVVKFHPN

Query:  NPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACFVPPFSSLQFLDAKQII-SGS
           L  SG    +L++WD R    +  Y      I  +EF+P+    +       S   ++ + VWD+T    L    C   P  SL F   + ++ +GS
Subjt:  NPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACFVPPFSSLQFLDAKQII-SGS

Query:  SDGSIYFYDYESSLIIHKLKASEQACIDVAIHP
        +D ++ F+D E+  +I   +        +A HP
Subjt:  SDGSIYFYDYESSLIIHKLKASEQACIDVAIHP

AT4G02730.1 Transducin/WD40 repeat-like superfamily protein1.0e-1525.09Show/hide
Query:  PKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTE-VGVFKEES
        P R   TL+ HT  ++ V++S    +LLASA++D T+ +W+  +T   L  +   H + + D+ WS       S   DC  R+ D     E + V +  +
Subjt:  PKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTE-VGVFKEES

Query:  G-VAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSD-------------------------VSASNSSESS--
          V  V F+P + +L +SG    ++++W+++ GK V        PI  V F  + +  +S+S                          VS +  S +   
Subjt:  G-VAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSD-------------------------VSASNSSESS--

Query:  IIVWDVTREVPLSYQAC--FVPPF-----------SSLQFLDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHP
        I+V  +   + LS  A   F+  +           S+    + K I+SGS D  +Y +D ++  I+ +L+    A I V+ HP
Subjt:  IIVWDVTREVPLSYQAC--FVPPF-----------SSLQFLDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHP

AT4G29830.1 Transducin/WD40 repeat-like superfamily protein4.3e-1123.7Show/hide
Query:  DCHTKPVNAVQWSPT---HAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFK-EESGVAVV
        + H   V A  W P       LL + ++D T+ +W     E  L   ++ H   V  +     G+   S   D   R+ DV+    + V +   S V  +
Subjt:  DCHTKPVNAVQWSPT---HAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFK-EESGVAVV

Query:  KFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYN--RRLGP-----------ILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACFVP
        +F P    L ++GG   S+++WD    ++++  +  R   P           +L V ++PN  +        A  S + +I V+DV R   L        
Subjt:  KFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYN--RRLGP-----------ILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACFVP

Query:  PFSSLQF--LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATCSWNGNISLF
        P  SL F  +D + + SGS DG +  +D E   ++  +       + V   P     IAT S +  + L+
Subjt:  PFSSLQF--LDAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATCSWNGNISLF

AT5G54520.1 Transducin/WD40 repeat-like superfamily protein9.5e-8349.68Show/hide
Query:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES
        MP RMS++L  HTK V A+ WS +H HLLASA +D  + +WNVWS ++K       H+A VKDV+WS+QGLS+LSCGYDC SRL DVE+G E   FKE+ 
Subjt:  MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEES

Query:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLS---------------
         V VVKFHP+N ++FLSGG KGSL++WD+R  K V++Y R LGPILDVEF     QFISSSDVS  N SE+++IVWD++REVPLS               
Subjt:  GVAVVKFHPNNPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLS---------------

Query:  --------------YQACFV--PPFSSLQFL------------------DAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC
                      Y A F   PPF   ++                   D + + SGSSDGS+Y YDY+S+ +I KLKA EQ C++V+ HP LPNV+A C
Subjt:  --------------YQACFV--PPFSSLQFL------------------DAKQIISGSSDGSIYFYDYESSLIIHKLKASEQACIDVAIHPTLPNVIATC

Query:  SWNGNISLFQ
        SWNG +S+F+
Subjt:  SWNGNISLFQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAAAAGGATGTCTGTAACTCTTGATTGCCATACAAAACCCGTCAATGCAGTTCAATGGTCGCCAACACATGCTCATCTCCTTGCTTCTGCTGCTATGGATCACAC
GATCTGCATATGGAACGTATGGAGCACAGAGCAGAAGCTAGCATTCAAGTCAAGCATTCACGACGCTGCAGTTAAAGATGTTCAATGGTCACAACAAGGATTATCTATTC
TTTCTTGTGGATATGATTGTGCTTCAAGATTGATTGATGTTGAGAAGGGGACAGAAGTTGGAGTATTCAAGGAGGAATCAGGAGTTGCTGTTGTAAAGTTCCATCCTAAC
AACCCAAGTCTCTTCCTTTCCGGTGGACTGAAAGGTAGCCTCCAAATGTGGGATATGAGAATTGGAAAAGTGGTTAACAAATACAACCGACGTCTTGGTCCAATTCTTGA
TGTTGAATTTACTCCCAATAGCAATCAATTCATCTCTTCCAGCGATGTTTCTGCAAGCAATAGCAGTGAAAGCTCTATCATCGTTTGGGATGTCACAAGAGAAGTTCCGC
TTTCATATCAGGCATGTTTTGTTCCACCTTTTTCATCACTACAATTCCTGGATGCCAAGCAGATCATCTCTGGTTCTTCAGATGGCTCTATATATTTTTACGATTATGAA
TCATCCTTGATTATACATAAACTAAAAGCATCTGAACAGGCTTGCATAGATGTTGCCATCCACCCGACCTTGCCTAATGTAATCGCTACGTGCAGCTGGAATGGAAATAT
TTCACTGTTCCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTAAAAGGATGTCTGTAACTCTTGATTGCCATACAAAACCCGTCAATGCAGTTCAATGGTCGCCAACACATGCTCATCTCCTTGCTTCTGCTGCTATGGATCACAC
GATCTGCATATGGAACGTATGGAGCACAGAGCAGAAGCTAGCATTCAAGTCAAGCATTCACGACGCTGCAGTTAAAGATGTTCAATGGTCACAACAAGGATTATCTATTC
TTTCTTGTGGATATGATTGTGCTTCAAGATTGATTGATGTTGAGAAGGGGACAGAAGTTGGAGTATTCAAGGAGGAATCAGGAGTTGCTGTTGTAAAGTTCCATCCTAAC
AACCCAAGTCTCTTCCTTTCCGGTGGACTGAAAGGTAGCCTCCAAATGTGGGATATGAGAATTGGAAAAGTGGTTAACAAATACAACCGACGTCTTGGTCCAATTCTTGA
TGTTGAATTTACTCCCAATAGCAATCAATTCATCTCTTCCAGCGATGTTTCTGCAAGCAATAGCAGTGAAAGCTCTATCATCGTTTGGGATGTCACAAGAGAAGTTCCGC
TTTCATATCAGGCATGTTTTGTTCCACCTTTTTCATCACTACAATTCCTGGATGCCAAGCAGATCATCTCTGGTTCTTCAGATGGCTCTATATATTTTTACGATTATGAA
TCATCCTTGATTATACATAAACTAAAAGCATCTGAACAGGCTTGCATAGATGTTGCCATCCACCCGACCTTGCCTAATGTAATCGCTACGTGCAGCTGGAATGGAAATAT
TTCACTGTTCCAGTGA
Protein sequenceShow/hide protein sequence
MPKRMSVTLDCHTKPVNAVQWSPTHAHLLASAAMDHTICIWNVWSTEQKLAFKSSIHDAAVKDVQWSQQGLSILSCGYDCASRLIDVEKGTEVGVFKEESGVAVVKFHPN
NPSLFLSGGLKGSLQMWDMRIGKVVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACFVPPFSSLQFLDAKQIISGSSDGSIYFYDYE
SSLIIHKLKASEQACIDVAIHPTLPNVIATCSWNGNISLFQ