; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026769 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026769
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold13:26393898..26395518
RNA-Seq ExpressionSpg026769
SyntenySpg026769
Gene Ontology termsGO:0043457 - regulation of cellular respiration (biological process)
InterPro domainsIPR044792 - Protein TAR1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF2086473.1 unnamed protein product [Brassica napus]1.5e-3470Show/hide
Query:  GFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPR------GSEGNGALTLSGATFQGTCARSVVEDAFPYYNPDAE
        GFG HLNP +SMP++DRRTG   S SD   SP PIRFPPDNFKH LTL SKSFSS PR      GS  +GALTLSGA FQGT ARSV EDA P YN +AE
Subjt:  GFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPR------GSEGNGALTLSGATFQGTCARSVVEDAFPYYNPDAE

Query:  GDRFSSWALPGSLAVYRGIL
          RFSSWALPGSLAV +GIL
Subjt:  GDRFSSWALPGSLAVYRGIL

GEY74831.1 hypothetical protein [Tanacetum cinerariifolium]5.4e-3762Show/hide
Query:  RRC-RSKPEGARWQPRSGRRRLHRRNKGLGFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPR------GSEGNGA
        R C  ++ +GAR  PRS RR LH      GFG   NP++S P+VDR+TG  RSTSD   SP PI FPPDNFKH LTLFSKSFSSFPR      GS  +GA
Subjt:  RRC-RSKPEGARWQPRSGRRRLHRRNKGLGFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPR------GSEGNGA

Query:  LTLSGATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVYRGILS
        LT+SGA FQGT ARSV EDA P YN D E   F SWA+PGSLAV +GILS
Subjt:  LTLSGATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVYRGILS

KAE8637537.1 hypothetical protein CSA_017393 [Cucumis sativus]1.2e-3964.38Show/hide
Query:  GSEGNGALTLSGATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVYRGILSCLTWGRIESIVFGDDIQRVDIEVLARLLGGVARTEVATRYRGW
        GSE NGALTLSGA FQGTCARS  EDA P YN + +  RFSSWALPGSLAV RGILS LTWGR+ES+V    ++    E  A + GG    E  TR+RGW
Subjt:  GSEGNGALTLSGATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVYRGILSCLTWGRIESIVFGDDIQRVDIEVLARLLGGVARTEVATRYRGW

Query:  INHRSVTTTGVEDSNLSQPHDGAHGRPACARTCATNPKGG---CMG
        INHRSV TT VEDSNLS PHDGAHGRP CA    T+P GG   C+G
Subjt:  INHRSVTTTGVEDSNLSQPHDGAHGRPACARTCATNPKGG---CMG

KAE8668514.1 hypothetical protein F3Y22_tig00112304pilonHSYRG00003 [Hibiscus syriacus]1.1e-3767.16Show/hide
Query:  SKPEGARWQPRSGRRRLHRRNKGLGFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPR------GSEGNGALTLSG
        ++ + A W PRS RRRL  R KG G GRH +P +S P+ DRRTG  RSTSD G SP PIRFPPDNFKH LTLFSKSFSSFPR      GS  +GALTL G
Subjt:  SKPEGARWQPRSGRRRLHRRNKGLGFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPR------GSEGNGALTLSG

Query:  ATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALP
          FQGT ARSV EDA P YN DAEGDR SSWALP
Subjt:  ATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALP

KAF3437846.1 hypothetical protein FNV43_RR20602 [Rhamnella rubrinervis]8.1e-3350.53Show/hide
Query:  PFAYLSRARRCRSKPEGARWQPRSGRRRLHRRNKGLGFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSF-----------
        P A    A+   ++ +GAR QPRS RRRLH  +   G GRH NP++S P+VDRRTGSHRSTSD G SP PIRFPPD FKH LTLF   F           
Subjt:  PFAYLSRARRCRSKPEGARWQPRSGRRRLHRRNKGLGFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSF-----------

Query:  ------------------------SSFPRGSEG---NGALTLSGATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVYRGIL
                                 + PRG+ G   +GALTLSGA FQGT ARS  EDA   YN +A G RFS+WA+PGSLAV RGIL
Subjt:  ------------------------SSFPRGSEG---NGALTLSGATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVYRGIL

TrEMBL top hitse value%identityAlignment
A0A0A0KEK9 Uncharacterized protein1.7e-3963.7Show/hide
Query:  GSEGNGALTLSGATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVYRGILSCLTWGRIESIVFGDDIQRVDIEVLARLLGGVARTEVATRYRGW
        GSE NGALTLSGA FQGTCARS  EDA P YN + +  RFSSWALPGSLAV RGILS LTWGR+ES+V    ++    E  A + G     +V TR+RGW
Subjt:  GSEGNGALTLSGATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVYRGILSCLTWGRIESIVFGDDIQRVDIEVLARLLGGVARTEVATRYRGW

Query:  INHRSVTTTGVEDSNLSQPHDGAHGRPACARTCATNPKGG---CMG
        INHRSV TT VEDSNLS PHDGAHGRP CA    T+P GG   C+G
Subjt:  INHRSVTTTGVEDSNLSQPHDGAHGRPACARTCATNPKGG---CMG

A0A6A2YBM5 Uncharacterized protein5.3e-3867.16Show/hide
Query:  SKPEGARWQPRSGRRRLHRRNKGLGFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPR------GSEGNGALTLSG
        ++ + A W PRS RRRL  R KG G GRH +P +S P+ DRRTG  RSTSD G SP PIRFPPDNFKH LTLFSKSFSSFPR      GS  +GALTL G
Subjt:  SKPEGARWQPRSGRRRLHRRNKGLGFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPR------GSEGNGALTLSG

Query:  ATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALP
          FQGT ARSV EDA P YN DAEGDR SSWALP
Subjt:  ATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALP

A0A6N2KEE6 Uncharacterized protein5.5e-5153.97Show/hide
Query:  SKPEGARWQPRSGRRRLHRRNKGLGFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPRGSEGNGALTLSGATFQGT
        ++ +GAR  PRS RR LHRR KG G GRH +P++S P+ DRRTG  RSTSD G SP PI FPPDNFKH LTLFSKSFSSFPRGS  +GALTLSGA FQGT
Subjt:  SKPEGARWQPRSGRRRLHRRNKGLGFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPRGSEGNGALTLSGATFQGT

Query:  CARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVYRGILSCLTWGRIESIVFGDDIQRVDIEVLARLLGGVARTEVATRYRGWINHRSVTTT--GVEDSNL
         A S  EDA P YN +A G RFSSWA PGSLAV RGILS LTWGR ESI             L     GV     AT  R  ++    TT   G     L
Subjt:  CARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVYRGILSCLTWGRIESIVFGDDIQRVDIEVLARLLGGVARTEVATRYRGWINHRSVTTT--GVEDSNL

Query:  S-QPHDGAHGRPACARTCATNPKGGCMGAMMRDTQADVP
          +P  G   R    R     P+G  +GA MRDT+   P
Subjt:  S-QPHDGAHGRPACARTCATNPKGGCMGAMMRDTQADVP

A0A6N2KNB2 Uncharacterized protein3.7e-5550.7Show/hide
Query:  ARRCRSKPEGARWQPRSGRRRLHRRNKGLGFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPR-------------
        AR CR++ +GAR  PRS RR LHRR KG G GRH +P++S P+ DRRTG  RSTSD G SP PI FPPDNFKH LTLFSKSFSSFPR             
Subjt:  ARRCRSKPEGARWQPRSGRRRLHRRNKGLGFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPR-------------

Query:  -------------------------GSEGNGALTLSGATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVYRGILSCLTWGRIESIVFGDDIQR
                                 GS  +GALTLSGA FQGT A S  EDA P YN +A G RFSSWA PGSLAV RGILS LTWGR ESI+       
Subjt:  -------------------------GSEGNGALTLSGATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVYRGILSCLTWGRIESIVFGDDIQR

Query:  VDIEVLARLLGGVARTEVATRYRGWINHRSVTTTGVEDSNLSQPHDGAHGRPACARTCATNPKGGCMGAMMRDTQADVPSARRLRA
               R  G  AR     R         V  T  EDS L QP  GA GRP  A    +       GA MRDTQADVPS RR RA
Subjt:  VDIEVLARLLGGVARTEVATRYRGWINHRSVTTTGVEDSNLSQPHDGAHGRPACARTCATNPKGGCMGAMMRDTQADVPSARRLRA

A0A6N2N9P9 Uncharacterized protein2.5e-4350.81Show/hide
Query:  SKPEGARWQPRSGRRRLHRRNKGLGFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPRGSEGNGALTLSGATFQGT
        ++ +GAR  PRS RR LHRR KG G GRH +P++S P+ DRRTG  RSTSD G SP PI FPPDNFKH LTLFSKSFSSFPRGS  +GALTLSGA FQGT
Subjt:  SKPEGARWQPRSGRRRLHRRNKGLGFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPRGSEGNGALTLSGATFQGT

Query:  CARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVYRGILSCLTWGRIESIVFGDDIQRVDIEVLARLLGGVARTEVATRYRGWINHRSVTTT--GVEDSNL
         A S  EDA P YN +A        A P S A +    S LTWGR ESI             L     GV     AT  R  ++    TT   G     L
Subjt:  CARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVYRGILSCLTWGRIESIVFGDDIQRVDIEVLARLLGGVARTEVATRYRGWINHRSVTTT--GVEDSNL

Query:  S-QPHDGAHGRPACARTCATNPKGGCMGAMMRDTQADVPSARRLRA
          +P  G   R    R     P+G  +GA MRDTQADVPS RR RA
Subjt:  S-QPHDGAHGRPACARTCATNPKGGCMGAMMRDTQADVPSARRLRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAAGCCACGGGCCTTGGCTTGCATACGAGCACCCTTGCATCCATGCACGTTCGTTCTCCGAAACTTAGCGTGTGTGTTGGCCTTTGCTTACCCTATAACCTCCAT
GACACTTGGAAGGAATAGATGGGTTTTATGTGCGGGGAGGGACGAATCGGAGCGACGAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAAT
ACCCTTTCGCGTATTTAAGTCGAGCGCGTAGATGTCGAAGCAAGCCCGAGGGCGCACGCTGGCAGCCACGATCGGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTG
GGCTTTGGTCGCCATCTCAATCCAAATCAGTCCATGCCCCAAGTCGATCGGCGGACCGGCTCTCACCGTTCCACCTCCGACTGGGGCACATCGCCGGACCCCATCCGCTT
CCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGGTCCGAGGGCAACGGGGCTCTCACCCTCTCCGGTGCCACCTTCC
AAGGGACTTGTGCCCGGTCTGTCGTTGAGGATGCTTTTCCATATTACAATCCAGACGCCGAGGGCGACCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTTAT
AGGGGAATCCTTTCCTGCCTGACCTGGGGTCGCATCGAGAGCATCGTCTTTGGGGACGACATTCAGAGGGTCGACATAGAAGTCCTCGCTCGCTTGCTAGGAGGAGTTGC
ACGGACTGAGGTCGCGACGCGGTATCGAGGTTGGATCAACCACCGTAGTGTCACAACGACAGGCGTCGAGGACTCGAATTTAAGCCAACCGCACGACGGTGCACACGGGA
GGCCAGCGTGTGCCCGCACCTGCGCAACCAACCCGAAGGGGGGTTGCATGGGGGCAATGATGCGTGACACCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTAAGCCACGGGCCTTGGCTTGCATACGAGCACCCTTGCATCCATGCACGTTCGTTCTCCGAAACTTAGCGTGTGTGTTGGCCTTTGCTTACCCTATAACCTCCAT
GACACTTGGAAGGAATAGATGGGTTTTATGTGCGGGGAGGGACGAATCGGAGCGACGAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAAT
ACCCTTTCGCGTATTTAAGTCGAGCGCGTAGATGTCGAAGCAAGCCCGAGGGCGCACGCTGGCAGCCACGATCGGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTG
GGCTTTGGTCGCCATCTCAATCCAAATCAGTCCATGCCCCAAGTCGATCGGCGGACCGGCTCTCACCGTTCCACCTCCGACTGGGGCACATCGCCGGACCCCATCCGCTT
CCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGGTCCGAGGGCAACGGGGCTCTCACCCTCTCCGGTGCCACCTTCC
AAGGGACTTGTGCCCGGTCTGTCGTTGAGGATGCTTTTCCATATTACAATCCAGACGCCGAGGGCGACCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTTAT
AGGGGAATCCTTTCCTGCCTGACCTGGGGTCGCATCGAGAGCATCGTCTTTGGGGACGACATTCAGAGGGTCGACATAGAAGTCCTCGCTCGCTTGCTAGGAGGAGTTGC
ACGGACTGAGGTCGCGACGCGGTATCGAGGTTGGATCAACCACCGTAGTGTCACAACGACAGGCGTCGAGGACTCGAATTTAAGCCAACCGCACGACGGTGCACACGGGA
GGCCAGCGTGTGCCCGCACCTGCGCAACCAACCCGAAGGGGGGTTGCATGGGGGCAATGATGCGTGACACCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGTAA
Protein sequenceShow/hide protein sequence
MPKPRALACIRAPLHPCTFVLRNLACVLAFAYPITSMTLGRNRWVLCAGRDESERRRAESQWIVAARPLCHLQYPFAYLSRARRCRSKPEGARWQPRSGRRRLHRRNKGL
GFGRHLNPNQSMPQVDRRTGSHRSTSDWGTSPDPIRFPPDNFKHYLTLFSKSFSSFPRGSEGNGALTLSGATFQGTCARSVVEDAFPYYNPDAEGDRFSSWALPGSLAVY
RGILSCLTWGRIESIVFGDDIQRVDIEVLARLLGGVARTEVATRYRGWINHRSVTTTGVEDSNLSQPHDGAHGRPACARTCATNPKGGCMGAMMRDTQADVPSARRLRA