; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026770 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026770
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold13:25958993..25965551
RNA-Seq ExpressionSpg026770
SyntenySpg026770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.0e-2247.95Show/hide
Query:  ADARKEVVEDVEASDLKKGETSTSLVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVAR
        A A  +     E   LK  E    L   +K LL+EG+++P +RKGLGYKLPEP+RITR+GK K+ D NHI V+EVD  KEKE   QRT  F RI P VAR
Subjt:  ADARKEVVEDVEASDLKKGETSTSLVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVAR

Query:  ASVFQRLIVNETEEESVQPTNSSTRSSIFRTLSMLIGEEESTLSTP
        A VF+RL V E E +  Q T++  R S F  LS+   +   T   P
Subjt:  ASVFQRLIVNETEEESVQPTNSSTRSSIFRTLSMLIGEEESTLSTP

TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.4e-0239.39Show/hide
Query:  KSQRKKGKKKSRRSKPVVEESEDFFCPPQPVTLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDV
        K+Q+ K KKK+R+ K + +E +DF    + +TLA +FP RFL D Q E    V CH ++  E++ +
Subjt:  KSQRKKGKKKSRRSKPVVEESEDFFCPPQPVTLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDV

TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]6.5e-2252.54Show/hide
Query:  LVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVNETEEESVQPTNSST
        L   +K LL+EG+S+P +RKGLGYK PEP+RIT++GK KV DINHI +EE D++  KE  +QR  VF RI P VAR  VF+RL + E E E +Q   +  
Subjt:  LVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVNETEEESVQPTNSST

Query:  RSSIFRTLSMLIGEEEST
        R S+FR L+    +EEST
Subjt:  RSSIFRTLSMLIGEEEST

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]2.9e-2253.39Show/hide
Query:  LVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVNETEEESVQPTNSST
        L   +K LL+EG+S+P +RKGLGYK PEP+RIT++GK KV DINHI +EE D++  KE  +QR  VF RI P VAR  VF+RL + E E E +Q   S  
Subjt:  LVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVNETEEESVQPTNSST

Query:  RSSIFRTLSMLIGEEEST
        R S+FR L+    +EEST
Subjt:  RSSIFRTLSMLIGEEEST

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]3.1e-0338.54Show/hide
Query:  AVASRISKLIEESSKDKVAVKDNPLFESVTPTSEQPKDTLNPHVMSVMMADVDQDERMAEMERKLNPLMKAV--KSQRKKGKKKSRRSKPVVEESE
        A+A  I K + ES K  + +K+NPL+      S +     +P VMSVMMADV  +  MAEMERK+N LMK V  +       K+  +++   E S+
Subjt:  AVASRISKLIEESSKDKVAVKDNPLFESVTPTSEQPKDTLNPHVMSVMMADVDQDERMAEMERKLNPLMKAV--KSQRKKGKKKSRRSKPVVEESE

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.1e+0032.77Show/hide
Query:  KSQRKKGKKKSRRSKPVVEESEDFFCPPQPVTLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVLASSSGTVAEPQADARKEVVEDVEASDLKKGETS
        K+Q+ K KKK+ + K V  E  +F  P + VTLA + P+ FL D Q E  E V CH ++  E ++++   S        D  +  VED+ +      ET 
Subjt:  KSQRKKGKKKSRRSKPVVEESEDFFCPPQPVTLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVLASSSGTVAEPQADARKEVVEDVEASDLKKGETS

Query:  TSLVKPKKNLLKEGYSLPT
        T L+    N      S PT
Subjt:  TSLVKPKKNLLKEGYSLPT

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]2.9e-2253.39Show/hide
Query:  LVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVNETEEESVQPTNSST
        L   +K LL+EG+S+P +RKGLGYK PEP+RIT++GK KV DINHI +EE D++  KE  +QR  VF RI P VAR  VF+RL + E E E +Q   S  
Subjt:  LVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVNETEEESVQPTNSST

Query:  RSSIFRTLSMLIGEEEST
        R S+FR L+    +EEST
Subjt:  RSSIFRTLSMLIGEEEST

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]6.5e-2252.54Show/hide
Query:  LVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVNETEEESVQPTNSST
        L   +K LL+EG+S+P +RKGLGYK PEP+RIT++GK KV DINHI +EE D++  KE  +QR  VF RI P VAR  VF+RL + E E E +Q   +  
Subjt:  LVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVNETEEESVQPTNSST

Query:  RSSIFRTLSMLIGEEEST
        R S+FR L+    +EEST
Subjt:  RSSIFRTLSMLIGEEEST

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]3.1e-0338.54Show/hide
Query:  AVASRISKLIEESSKDKVAVKDNPLFESVTPTSEQPKDTLNPHVMSVMMADVDQDERMAEMERKLNPLMKAV--KSQRKKGKKKSRRSKPVVEESE
        A+A  I K + ES K  + +K+NPL+      S +     +P VMSVMMADV  +  MAEMERK+N LMK V  +       K+  +++   E S+
Subjt:  AVASRISKLIEESSKDKVAVKDNPLFESVTPTSEQPKDTLNPHVMSVMMADVDQDERMAEMERKLNPLMKAV--KSQRKKGKKKSRRSKPVVEESE

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.1e+0032.77Show/hide
Query:  KSQRKKGKKKSRRSKPVVEESEDFFCPPQPVTLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVLASSSGTVAEPQADARKEVVEDVEASDLKKGETS
        K+Q+ K KKK+ + K V  E  +F  P + VTLA + P+ FL D Q E  E V CH ++  E ++++   S        D  +  VED+ +      ET 
Subjt:  KSQRKKGKKKSRRSKPVVEESEDFFCPPQPVTLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVLASSSGTVAEPQADARKEVVEDVEASDLKKGETS

Query:  TSLVKPKKNLLKEGYSLPT
        T L+    N      S PT
Subjt:  TSLVKPKKNLLKEGYSLPT

TrEMBL top hitse value%identityAlignment
A0A5A7ULR4 Uncharacterized protein5.4e-2253.21Show/hide
Query:  LLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVNETEEESVQPTNSSTRSSIFRT
        LL+EG+++P +RKGLGYK PEP+RITR+GK KV D NHI V+EVD  +EKE   QRT  F RI P VAR  VF+RL + E E +  Q T++  R S F+ 
Subjt:  LLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVNETEEESVQPTNSSTRSSIFRT

Query:  LSMLIGEEE
        L+M+  +E+
Subjt:  LSMLIGEEE

A0A5D3BY54 Ty3-gypsy retrotransposon protein5.4e-2247.55Show/hide
Query:  ADARKEVVEDVEASDLKKGETSTSLVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVAR
        A A  +     E   LK  E    L   +K LL+EG+++P +RKGLGYK PEP+RITR+GK KV D NHI V+EVD  +EKE   QRT  F R+ P VAR
Subjt:  ADARKEVVEDVEASDLKKGETSTSLVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVAR

Query:  ASVFQRLIVNETEEESVQPTNSSTRSSIFRTLSMLIGEEESTL
        A VF+RL + E E + +Q T+S  R S F+ L+M    E+ +L
Subjt:  ASVFQRLIVNETEEESVQPTNSSTRSSIFRTLSMLIGEEESTL

A0A5D3BY54 Ty3-gypsy retrotransposon protein2.1e-0532.17Show/hide
Query:  VASRISKLIEESSKDKVAVKDNPLFESVTPTSEQPKDTLNPHVMSVMMADVDQDERMAEMERKLNPLMKAVKSQRKK--GKKKSRRSKPVVEESEDFFCP
        VA  I K + ES K  + +K+NPL+++   +S + K   +P VMSVMMAD+  +  MAEMERK+N LMKAV+ +  +    ++  R++   E S+     
Subjt:  VASRISKLIEESSKDKVAVKDNPLFESVTPTSEQPKDTLNPHVMSVMMADVDQDERMAEMERKLNPLMKAVKSQRKK--GKKKSRRSKPVVEESEDFFCP

Query:  PQPVTLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVLASS
          P+  A    +  + ++Q +  ++V+   + V +  D++A+S
Subjt:  PQPVTLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVLASS

A0A5D3BY54 Ty3-gypsy retrotransposon protein5.4e-2250Show/hide
Query:  VEASDLKKGETSTSLVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVN
        +E   LK  E    L   +K LL+EG+++P +RKGLGYK PEP+RITR+GK KV D NHI V+EVD  KEKE   QRT  F RI P VAR  VF+RL + 
Subjt:  VEASDLKKGETSTSLVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVN

Query:  ETEEESVQPTNSSTRSSIFRTLSMLIGEEE
        E E +  Q T++  R S F+ L+M   +E+
Subjt:  ETEEESVQPTNSSTRSSIFRTLSMLIGEEE

A0A5D3C0W6 Ty3-gypsy retrotransposon protein2.4e-2247.95Show/hide
Query:  ADARKEVVEDVEASDLKKGETSTSLVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVAR
        A A  +     E   LK  E    L   +K LL+EG+++P +RKGLGYKLPEP+RITR+GK K+ D NHI V+EVD  KEKE   QRT  F RI P VAR
Subjt:  ADARKEVVEDVEASDLKKGETSTSLVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVAR

Query:  ASVFQRLIVNETEEESVQPTNSSTRSSIFRTLSMLIGEEESTLSTP
        A VF+RL V E E +  Q T++  R S F  LS+   +   T   P
Subjt:  ASVFQRLIVNETEEESVQPTNSSTRSSIFRTLSMLIGEEESTLSTP

A0A5D3C0W6 Ty3-gypsy retrotransposon protein1.6e-0239.39Show/hide
Query:  KSQRKKGKKKSRRSKPVVEESEDFFCPPQPVTLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDV
        K+Q+ K KKK+R+ K + +E +DF    + +TLA +FP RFL D Q E    V CH ++  E++ +
Subjt:  KSQRKKGKKKSRRSKPVVEESEDFFCPPQPVTLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDV

A0A5D3C0W6 Ty3-gypsy retrotransposon protein4.1e-2251.64Show/hide
Query:  LVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVNETEEESVQPTNSST
        L   +K LL+EG+++P +RKGLGYK PEP+RITR+GK KV D NHI V+EVD  +EKE   QRT  F RI P VARA VF+RL V E E +  Q T++  
Subjt:  LVKPKKNLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVNETEEESVQPTNSST

Query:  RSSIFRTLSMLIGEEESTLSTP
        R S F  LS+   +   T   P
Subjt:  RSSIFRTLSMLIGEEESTLSTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTGGCCTACTTTGCGAATGAGGCAAACGACGTGATCCTAGATCGTTCAAGTAAGAGACATGCGAGAATAGAGATCAAGGAGGATCACACTCCTCTCGCTGTTGC
AAGTAGGATCTCAAAATTGATTGAAGAATCCTCTAAGGACAAGGTTGCAGTCAAAGACAACCCGTTGTTCGAATCTGTCACTCCAACATCAGAGCAGCCAAAGGATACAC
TAAATCCTCATGTGATGTCTGTCATGATGGCTGACGTAGACCAAGATGAAAGGATGGCTGAGATGGAAAGAAAACTCAATCCTCTAATGAAGGCAGTTAAATCTCAAAGG
AAGAAAGGAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCGTGGAGGAAAGTGAAGATTTCTTTTGTCCTCCACAACCCGTAACTTTGGCAAAATACTTCCCAAGGCGCTT
TCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCTTGCTAGTTCCTCGGGAACGGTGGCAGAACCAC
AAGCTGATGCAAGAAAGGAAGTTGTTGAAGATGTGGAGGCATCTGACCTTAAAAAGGGTGAAACATCTACAAGCCTTGTGAAACCTAAGAAGAATCTTCTAAAAGAAGGT
TATAGTCTGCCTACAACGAGAAAAGGACTTGGATATAAGTTGCCTGAGCCGGTTCGCATAACAAGAAGAGGGAAGGCTAAAGTGGCAGACATAAATCATATAATAGTAGA
GGAGGTTGATGACTCAAAAGAAAAAGAGAGCGTCGACCAACGAACTTTTGTTTTTAGGCGCATCGGGCCACCAGTTGCTCGTGCTTCAGTCTTTCAGAGGTTAATTGTGA
ATGAAACAGAAGAAGAAAGTGTACAACCTACCAATAGCTCCACTCGATCTTCAATTTTTCGAACGTTAAGTATGCTCATTGGAGAAGAAGAGAGTACACTTTCAACTCCG
GATGTCACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTGGCCTACTTTGCGAATGAGGCAAACGACGTGATCCTAGATCGTTCAAGTAAGAGACATGCGAGAATAGAGATCAAGGAGGATCACACTCCTCTCGCTGTTGC
AAGTAGGATCTCAAAATTGATTGAAGAATCCTCTAAGGACAAGGTTGCAGTCAAAGACAACCCGTTGTTCGAATCTGTCACTCCAACATCAGAGCAGCCAAAGGATACAC
TAAATCCTCATGTGATGTCTGTCATGATGGCTGACGTAGACCAAGATGAAAGGATGGCTGAGATGGAAAGAAAACTCAATCCTCTAATGAAGGCAGTTAAATCTCAAAGG
AAGAAAGGAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCGTGGAGGAAAGTGAAGATTTCTTTTGTCCTCCACAACCCGTAACTTTGGCAAAATACTTCCCAAGGCGCTT
TCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCTTGCTAGTTCCTCGGGAACGGTGGCAGAACCAC
AAGCTGATGCAAGAAAGGAAGTTGTTGAAGATGTGGAGGCATCTGACCTTAAAAAGGGTGAAACATCTACAAGCCTTGTGAAACCTAAGAAGAATCTTCTAAAAGAAGGT
TATAGTCTGCCTACAACGAGAAAAGGACTTGGATATAAGTTGCCTGAGCCGGTTCGCATAACAAGAAGAGGGAAGGCTAAAGTGGCAGACATAAATCATATAATAGTAGA
GGAGGTTGATGACTCAAAAGAAAAAGAGAGCGTCGACCAACGAACTTTTGTTTTTAGGCGCATCGGGCCACCAGTTGCTCGTGCTTCAGTCTTTCAGAGGTTAATTGTGA
ATGAAACAGAAGAAGAAAGTGTACAACCTACCAATAGCTCCACTCGATCTTCAATTTTTCGAACGTTAAGTATGCTCATTGGAGAAGAAGAGAGTACACTTTCAACTCCG
GATGTCACGTGA
Protein sequenceShow/hide protein sequence
MDVAYFANEANDVILDRSSKRHARIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVTPTSEQPKDTLNPHVMSVMMADVDQDERMAEMERKLNPLMKAVKSQR
KKGKKKSRRSKPVVEESEDFFCPPQPVTLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVLASSSGTVAEPQADARKEVVEDVEASDLKKGETSTSLVKPKKNLLKEG
YSLPTTRKGLGYKLPEPVRITRRGKAKVADINHIIVEEVDDSKEKESVDQRTFVFRRIGPPVARASVFQRLIVNETEEESVQPTNSSTRSSIFRTLSMLIGEEESTLSTP
DVT