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Spg026784 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026784
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationscaffold13:24980542..24982088
RNA-Seq ExpressionSpg026784
SyntenySpg026784
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]4.6e-0641.79Show/hide
Query:  GNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS
        G+   +NP A+ L++AL  +   G +W+   T+   L P++L  E+++WL FIK  +MPT HDSTIS
Subjt:  GNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS

KAA0047856.1 hypothetical protein E6C27_scaffold133G001210 [Cucumis melo var. makuwa]1.1e-0440.3Show/hide
Query:  GNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS
        G+   KNP  + L+EAL      G +W++  T +  L P  L  E ++WL FIK  +MPT HD+ IS
Subjt:  GNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]1.5e-0437.31Show/hide
Query:  RGNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTI
        RGN+ + +PS +++ EA RL+ R    W  S     SL P ++  +  +W++ +KNRL+PT++DS+I
Subjt:  RGNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTI

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]1.0e-0535.21Show/hide
Query:  LHSRGNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS
        L + GN  I +P    + + LR++ + G QW+ S   +K+L  ++L PE  +W++ +K RL+PT+H+ T+S
Subjt:  LHSRGNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]1.8e-0740.3Show/hide
Query:  GNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS
        GN  I +P  +K+ +ALR + + G QW+ S   +K+L  S+L PE  +W++ +K R++PT+HD T+S
Subjt:  GNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS

TrEMBL top hitse value%identityAlignment
A0A2P5CPE8 Uncharacterized protein3.5e-0440Show/hide
Query:  HSRGNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS
        HS   +AI  P   +L   L  VA  G +WN S     + + S L P   +W HF+K+RL+PTTH  T+S
Subjt:  HSRGNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS

A0A5A7TZE0 Protein MNN4-like3.5e-0445.16Show/hide
Query:  KNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS
        K PS   ++ AL  VA  G++W+ +  K   L P  LK   ++WL FIK  LMPT HD+TIS
Subjt:  KNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS

A0A5A7U0U4 Uncharacterized protein5.4e-0540.3Show/hide
Query:  GNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS
        G+   KNP  + L+EAL      G +W++  T +  L P  L  E ++WL FIK  +MPT HD+ IS
Subjt:  GNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS

A0A5D3CW17 Uncharacterized protein2.2e-0641.79Show/hide
Query:  GNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS
        G+   +NP A+ L++AL  +   G +W+   T+   L P++L  E+++WL FIK  +MPT HDSTIS
Subjt:  GNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTIS

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220077.1e-0537.31Show/hide
Query:  RGNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTI
        RGN+ + +PS +++ EA RL+ R    W  S     SL P ++  +  +W++ +KNRL+PT++DS+I
Subjt:  RGNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTGCACTCGAGAGGTAATGATGCTATAAAGAATCCTTCGGCCAAGAAATTGAGAGAAGCACTCAGATTAGTGGCCAGGAAGGGAGTTCAGTGGAATGAATCCCA
AACTAAAGTGAAGTCTCTAGTGCCAAGCGAGTTGAAGCCTGAACTGGCAATTTGGCTTCACTTTATCAAGAATAGGTTGATGCCCACCACCCACGACAGCACTATTTCAA
CGGCTGACCCACAAACGCGTTCTTCGGCGGGTCAAGAAGCTCGAAAAGCTCCACGATGGGGAAGAGACGAAACGAAACTCAGACGGCGCGAGTTTGTGGGTTTGAAGCTC
GAGGCGGCGTCTTCTCTGACCCCTTCGATCTGTCGTTCCATCTCTCTCTCATGCCCGCTCAGAATACTCTCACTGTCCCCCTCTCTCTATCTCACCGGAAACCCGCTCAG
ATCTGTTGTTCCCTCTCTCTCATGCCTGCTCAGATCTGTCGTATCTACCATATTCGTAAAATCGAGTTCCATCCCCTTAAGATCTGGTCAGATTTGGTGTCGTCGCCTTC
AGATCTGGTTGAATCTGGAACGAAGGGCGCTGCTCACCTTCAGATCTGCCCTCGCCGTTCTTCGAGTGAAAAAAATCGTGGACGACGGCCCTCCTCCGCCTCCCTCCTCC
GACGAGCGGCGTCGGAAACCCTCTTTTCTGTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTTGCACTCGAGAGGTAATGATGCTATAAAGAATCCTTCGGCCAAGAAATTGAGAGAAGCACTCAGATTAGTGGCCAGGAAGGGAGTTCAGTGGAATGAATCCCA
AACTAAAGTGAAGTCTCTAGTGCCAAGCGAGTTGAAGCCTGAACTGGCAATTTGGCTTCACTTTATCAAGAATAGGTTGATGCCCACCACCCACGACAGCACTATTTCAA
CGGCTGACCCACAAACGCGTTCTTCGGCGGGTCAAGAAGCTCGAAAAGCTCCACGATGGGGAAGAGACGAAACGAAACTCAGACGGCGCGAGTTTGTGGGTTTGAAGCTC
GAGGCGGCGTCTTCTCTGACCCCTTCGATCTGTCGTTCCATCTCTCTCTCATGCCCGCTCAGAATACTCTCACTGTCCCCCTCTCTCTATCTCACCGGAAACCCGCTCAG
ATCTGTTGTTCCCTCTCTCTCATGCCTGCTCAGATCTGTCGTATCTACCATATTCGTAAAATCGAGTTCCATCCCCTTAAGATCTGGTCAGATTTGGTGTCGTCGCCTTC
AGATCTGGTTGAATCTGGAACGAAGGGCGCTGCTCACCTTCAGATCTGCCCTCGCCGTTCTTCGAGTGAAAAAAATCGTGGACGACGGCCCTCCTCCGCCTCCCTCCTCC
GACGAGCGGCGTCGGAAACCCTCTTTTCTGTTATAA
Protein sequenceShow/hide protein sequence
MPLHSRGNDAIKNPSAKKLREALRLVARKGVQWNESQTKVKSLVPSELKPELAIWLHFIKNRLMPTTHDSTISTADPQTRSSAGQEARKAPRWGRDETKLRRREFVGLKL
EAASSLTPSICRSISLSCPLRILSLSPSLYLTGNPLRSVVPSLSCLLRSVVSTIFVKSSSIPLRSGQIWCRRLQIWLNLERRALLTFRSALAVLRVKKIVDDGPPPPPSS
DERRRKPSFLL