; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026792 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026792
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold13:24601564..24606264
RNA-Seq ExpressionSpg026792
SyntenySpg026792
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.5e-1851.24Show/hide
Query:  RPRGNRSSLQTRELDKT-----------------VEIELPMPDTLPTSAESSRSSSSTWVEL-----YIESVYY--------VNVLFNVQEGQRVSLEED
        RPRGNR+SLQT ELDKT                 VEIELP+PDTLPTSAESS S+SSTW+EL     ++E  YY        ++++FNV  G    +  D
Subjt:  RPRGNRSSLQTRELDKT-----------------VEIELPMPDTLPTSAESSRSSSSTWVEL-----YIESVYY--------VNVLFNVQEGQRVSLEED

Query:  DVRWLHAIFQAKLAGGPGGDV
        +V WLHA+F AK AGGPGG V
Subjt:  DVRWLHAIFQAKLAGGPGGDV

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]7.8e-2058.42Show/hide
Query:  PRGNRSSLQTRELDKTVEIELPMPDTLPTSAESSRSSSSTWVELYIESVYYVNVLFNVQEGQRVS-----------LEEDDVRWLHAIFQAKLAGGPGGD
        PRGNR +L T +LDKTVEIELP+PDTLPTSAESS+S+SSTW+ELY ESV +V +LF      RV+           +  DD+ WLHA+F AK AG PGG 
Subjt:  PRGNRSSLQTRELDKTVEIELPMPDTLPTSAESSRSSSSTWVELYIESVYYVNVLFNVQEGQRVS-----------LEEDDVRWLHAIFQAKLAGGPGGD

Query:  V
        V
Subjt:  V

KAA0058280.1 uncharacterized protein E6C27_scaffold274G006090 [Cucumis melo var. makuwa]6.6e-1951.69Show/hide
Query:  PRGNRSSLQTRELDKT---------------VEIELPMPDTLPTSAESSRSSSSTWVELYIESVYY-------------VNVLFNVQEGQRVSLEEDDVR
        PRGNR SLQTRELDKT               V IELP+PD LPTSAESS S+SSTW+ELY ESV+              ++++FNV  G    +  DDV 
Subjt:  PRGNRSSLQTRELDKT---------------VEIELPMPDTLPTSAESSRSSSSTWVELYIESVYY-------------VNVLFNVQEGQRVSLEEDDVR

Query:  WLHAIFQAKLAGGPGGDV
        WLHA+F+AK  GGPGG V
Subjt:  WLHAIFQAKLAGGPGGDV

KAA0067117.1 hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa]2.5e-1843.56Show/hide
Query:  IKGSREPRICVVCVRGNSGRIGWESRFHFFR--------------PRGNRSSLQTRELDKT-----------------VEIELPMPDTLPTSAESSRSSS
        I+  REPRI      G          F F +              PRGNRSSLQT ELDKT                 VEIELP+PDTLPTSAES  S+S
Subjt:  IKGSREPRICVVCVRGNSGRIGWESRFHFFR--------------PRGNRSSLQTRELDKT-----------------VEIELPMPDTLPTSAESSRSSS

Query:  STWVELYIESVYYVNVLFN-----------VQEGQRVSLEEDDVRWLHAIFQAKLAGGPGGDV
        STW+ELY E V +V +LF              EG    +  DDV WLH +F+AK+AGGPGG V
Subjt:  STWVELYIESVYYVNVLFN-----------VQEGQRVSLEEDDVRWLHAIFQAKLAGGPGGDV

TYK11835.1 uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa]6.6e-1950.41Show/hide
Query:  FFRPRGNRSSLQTRELDKTV---------------EIELPMPDTLPTSAESSRSSSSTWVELYIESVYY-------------VNVLFNVQEGQRVSLEED
        +  PRGNR SLQT ELDKTV                IELP+PDTLPTSAESS S+SSTW+ELY ESV+              ++++FNV  G    +  D
Subjt:  FFRPRGNRSSLQTRELDKTV---------------EIELPMPDTLPTSAESSRSSSSTWVELYIESVYY-------------VNVLFNVQEGQRVSLEED

Query:  DVRWLHAIFQAKLAGGPGGDV
        DV WLHA+F+AK  GGPGG V
Subjt:  DVRWLHAIFQAKLAGGPGGDV

TrEMBL top hitse value%identityAlignment
A0A5A7U9X4 DNA/RNA polymerases superfamily protein7.1e-1951.24Show/hide
Query:  RPRGNRSSLQTRELDKT-----------------VEIELPMPDTLPTSAESSRSSSSTWVEL-----YIESVYY--------VNVLFNVQEGQRVSLEED
        RPRGNR+SLQT ELDKT                 VEIELP+PDTLPTSAESS S+SSTW+EL     ++E  YY        ++++FNV  G    +  D
Subjt:  RPRGNRSSLQTRELDKT-----------------VEIELPMPDTLPTSAESSRSSSSTWVEL-----YIESVYY--------VNVLFNVQEGQRVSLEED

Query:  DVRWLHAIFQAKLAGGPGGDV
        +V WLHA+F AK AGGPGG V
Subjt:  DVRWLHAIFQAKLAGGPGGDV

A0A5A7UAH6 CCHC-type domain-containing protein3.8e-2058.42Show/hide
Query:  PRGNRSSLQTRELDKTVEIELPMPDTLPTSAESSRSSSSTWVELYIESVYYVNVLFNVQEGQRVS-----------LEEDDVRWLHAIFQAKLAGGPGGD
        PRGNR +L T +LDKTVEIELP+PDTLPTSAESS+S+SSTW+ELY ESV +V +LF      RV+           +  DD+ WLHA+F AK AG PGG 
Subjt:  PRGNRSSLQTRELDKTVEIELPMPDTLPTSAESSRSSSSTWVELYIESVYYVNVLFNVQEGQRVS-----------LEEDDVRWLHAIFQAKLAGGPGGD

Query:  V
        V
Subjt:  V

A0A5A7UT17 CCHC-type domain-containing protein3.2e-1951.69Show/hide
Query:  PRGNRSSLQTRELDKT---------------VEIELPMPDTLPTSAESSRSSSSTWVELYIESVYY-------------VNVLFNVQEGQRVSLEEDDVR
        PRGNR SLQTRELDKT               V IELP+PD LPTSAESS S+SSTW+ELY ESV+              ++++FNV  G    +  DDV 
Subjt:  PRGNRSSLQTRELDKT---------------VEIELPMPDTLPTSAESSRSSSSTWVELYIESVYY-------------VNVLFNVQEGQRVSLEEDDVR

Query:  WLHAIFQAKLAGGPGGDV
        WLHA+F+AK  GGPGG V
Subjt:  WLHAIFQAKLAGGPGGDV

A0A5A7VIY9 Uncharacterized protein1.2e-1843.56Show/hide
Query:  IKGSREPRICVVCVRGNSGRIGWESRFHFFR--------------PRGNRSSLQTRELDKT-----------------VEIELPMPDTLPTSAESSRSSS
        I+  REPRI      G          F F +              PRGNRSSLQT ELDKT                 VEIELP+PDTLPTSAES  S+S
Subjt:  IKGSREPRICVVCVRGNSGRIGWESRFHFFR--------------PRGNRSSLQTRELDKT-----------------VEIELPMPDTLPTSAESSRSSS

Query:  STWVELYIESVYYVNVLFN-----------VQEGQRVSLEEDDVRWLHAIFQAKLAGGPGGDV
        STW+ELY E V +V +LF              EG    +  DDV WLH +F+AK+AGGPGG V
Subjt:  STWVELYIESVYYVNVLFN-----------VQEGQRVSLEEDDVRWLHAIFQAKLAGGPGGDV

A0A5D3CJX3 CCHC-type domain-containing protein3.2e-1950.41Show/hide
Query:  FFRPRGNRSSLQTRELDKTV---------------EIELPMPDTLPTSAESSRSSSSTWVELYIESVYY-------------VNVLFNVQEGQRVSLEED
        +  PRGNR SLQT ELDKTV                IELP+PDTLPTSAESS S+SSTW+ELY ESV+              ++++FNV  G    +  D
Subjt:  FFRPRGNRSSLQTRELDKTV---------------EIELPMPDTLPTSAESSRSSSSTWVELYIESVYY-------------VNVLFNVQEGQRVSLEED

Query:  DVRWLHAIFQAKLAGGPGGDV
        DV WLHA+F+AK  GGPGG V
Subjt:  DVRWLHAIFQAKLAGGPGGDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGAGTGGCCAGTTCGCCGACTCAATAATCCTACCATTTCAGGGGCAAGACCAAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCACTATTGGGG
TCCATTAGGTCCCACTGGACCCCTGGGATGGGGTAAAAGGCATCTCATTCATTGTCCTACTCTCAGAGAATTCCCCTCAAGGCTTCCTCTAGACTCCCACCAGTCTCCTG
CCTCTAGAAGTCTCAGAGTCATACCGGTGAGGAAGAAGAAGAAGATTTTCGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCT
GAGATCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAACTAAGAGGGTAGCAGAGAACCTCGAATCTGTGTTGTTTGTGTTCGGGGCAATTCT
GGACGAATTGGTTGGGAATCTCGTTTTCATTTCTTCAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCAAAAATTACTTTAAGTAGGTTTAATTTCAGGAGAAAGATAA
AGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCAATTCTGGACGAATTGGTTGGGAATCTCGTTTTCATTTCTTCAGGCCAAGAGGAAATAGGTCGAGT
CTACAAACCAGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGATGCCTGATACACTGCCAACGTCTGCTGAAAGCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTT
GTATATTGAGTCTGTCTATTATGTAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCAGGCTA
AGCTAGCAGGTGGTCCGGGAGGGGACGTTGGGTCAGTTCAGATAGAACTAGCGGAGTATGGTCTGAGTATTGTTGAGAGTGAGTCCAGTCAGGACTAG
mRNA sequenceShow/hide mRNA sequence
GAGAGTGGCCAGTTCGCCGACTCAATAATCCTACCATTTCAGGGGCAAGACCAAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCACTATTGGGG
TCCATTAGGTCCCACTGGACCCCTGGGATGGGGTAAAAGGCATCTCATTCATTGTCCTACTCTCAGAGAATTCCCCTCAAGGCTTCCTCTAGACTCCCACCAGTCTCCTG
CCTCTAGAAGTCTCAGAGTCATACCGGTGAGGAAGAAGAAGAAGATTTTCGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCT
GAGATCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAACTAAGAGGGTAGCAGAGAACCTCGAATCTGTGTTGTTTGTGTTCGGGGCAATTCT
GGACGAATTGGTTGGGAATCTCGTTTTCATTTCTTCAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCAAAAATTACTTTAAGTAGGTTTAATTTCAGGAGAAAGATAA
AGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCAATTCTGGACGAATTGGTTGGGAATCTCGTTTTCATTTCTTCAGGCCAAGAGGAAATAGGTCGAGT
CTACAAACCAGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGATGCCTGATACACTGCCAACGTCTGCTGAAAGCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTT
GTATATTGAGTCTGTCTATTATGTAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCAGGCTA
AGCTAGCAGGTGGTCCGGGAGGGGACGTTGGGTCAGTTCAGATAGAACTAGCGGAGTATGGTCTGAGTATTGTTGAGAGTGAGTCCAGTCAGGACTAG
Protein sequenceShow/hide protein sequence
ESGQFADSIILPFQGQDQMGAGNITVQDGIHSFHYWGPLGPTGPLGWGKRHLIHCPTLREFPSRLPLDSHQSPASRSLRVIPVRKKKKIFVVLRLKKIGKAHAKPAIAES
EINLSTSGFLFGLSYTEGTKRVAENLESVLFVFGAILDELVGNLVFISSGQEEIGRVYKPKITLSRFNFRRKIKGSREPRICVVCVRGNSGRIGWESRFHFFRPRGNRSS
LQTRELDKTVEIELPMPDTLPTSAESSRSSSSTWVELYIESVYYVNVLFNVQEGQRVSLEEDDVRWLHAIFQAKLAGGPGGDVGSVQIELAEYGLSIVESESSQD