| GenBank top hits | e value | %identity | Alignment |
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| KAA0040194.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-25 | 48.02 | Show/hide |
Query: STGFSSKRGGSLVFSGVLSILGVHFESEALFGYI-----------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSNTWVELY
STGFSSK GG LVFS LSI VH ++ L+ I PLSTLSVLRDNDAVVEIELP+PDTLPTSA+SS S+S+TW+ELY
Subjt: STGFSSKRGGSLVFSGVLSILGVHFESEALFGYI-----------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSNTWVELY
Query: IESVY------------------YEGQRVSLKEDDVRWLHTIFRTKLAGGLGGGST-SKSI-------WRAARVQSA
ESV+ +EG ++ DDV WLH IFR K AGG GGG T SKS+ WR + S+
Subjt: IESVY------------------YEGQRVSLKEDDVRWLHTIFRTKLAGGLGGGST-SKSI-------WRAARVQSA
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| KAA0042035.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | 2.6e-23 | 52.7 | Show/hide |
Query: SSKRGGSLVFSGVLSILGVHFESEALFGYI-PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSNTWVELYIESV------YYEGQRVS--------
SSK GG +VF LSIL VH ++ L+ I LSTLSVLRDNDAVVEIELPVPDTLPTSA+S S+S+TW+ELY ESV Y+ Q +S
Subjt: SSKRGGSLVFSGVLSILGVHFESEALFGYI-PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSNTWVELYIESV------YYEGQRVS--------
Query: -----LKEDDVRWLHTIFRTKLAGGLGGGST-----SKSIWRAARVQS
++ DDV WLH +FR K AGG GGG T S+S R+ V S
Subjt: -----LKEDDVRWLHTIFRTKLAGGLGGGST-----SKSIWRAARVQS
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| KAA0042035.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | 3.4e-07 | 52.38 | Show/hide |
Query: RGNRSSLQTRELDKK-----------------VEIKLPVPDTLPTSAESSRSSSNTWVELYIESVYYVNVLFYVSGGSTGIVRG
RGNR SLQT ELDK VEI+LP+PDTLPTSAESS S+S+T +ELY ESV+ +F GS GI+RG
Subjt: RGNRSSLQTRELDKK-----------------VEIKLPVPDTLPTSAESSRSSSNTWVELYIESVYYVNVLFYVSGGSTGIVRG
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| KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.5e-23 | 46.99 | Show/hide |
Query: TGFSSKRGGSLVFSGVLSILGVHFESEALFGYI------------------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSN
TGFSSK GG LVFS LSIL VH ++ L+ I PLSTLSVLRDNDAVVEIELPVPDTLPTSA+SS S+S+
Subjt: TGFSSKRGGSLVFSGVLSILGVHFESEALFGYI------------------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSN
Query: TWVELYIESVYYE---------------------GQRVSLKEDDVRWLHTIFRTKLAGGLGGGSTS
TW+ELY ESV+ E G ++ DDV WLH +FR K GG GGG T+
Subjt: TWVELYIESVYYE---------------------GQRVSLKEDDVRWLHTIFRTKLAGGLGGGSTS
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| TYK25935.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-25 | 48.02 | Show/hide |
Query: STGFSSKRGGSLVFSGVLSILGVHFESEALFGYI-----------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSNTWVELY
STGFSSK GG LVFS LSI VH ++ L+ I PLSTLSVLRDNDAVVEIELP+PDTLPTSA+SS S+S+TW+ELY
Subjt: STGFSSKRGGSLVFSGVLSILGVHFESEALFGYI-----------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSNTWVELY
Query: IESVY------------------YEGQRVSLKEDDVRWLHTIFRTKLAGGLGGGST-SKSI-------WRAARVQSA
ESV+ +EG ++ DDV WLH IFR K AGG GGG T SKS+ WR + S+
Subjt: IESVY------------------YEGQRVSLKEDDVRWLHTIFRTKLAGGLGGGST-SKSI-------WRAARVQSA
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| TYK26572.1 putative Retrotransposon protein [Cucumis melo var. makuwa] | 1.5e-23 | 46.99 | Show/hide |
Query: TGFSSKRGGSLVFSGVLSILGVHFESEALFGYI------------------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSN
TGFSSK GG LVFS LSIL VH ++ L+ I PLSTLSVLRDNDAVVEIELPVPDTLPTSA+SS S+S+
Subjt: TGFSSKRGGSLVFSGVLSILGVHFESEALFGYI------------------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSN
Query: TWVELYIESVYYE---------------------GQRVSLKEDDVRWLHTIFRTKLAGGLGGGSTS
TW+ELY ESV+ E G ++ DDV WLH +FR K GG GGG T+
Subjt: TWVELYIESVYYE---------------------GQRVSLKEDDVRWLHTIFRTKLAGGLGGGSTS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9P7 Gag/pol protein | 6.0e-26 | 48.02 | Show/hide |
Query: STGFSSKRGGSLVFSGVLSILGVHFESEALFGYI-----------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSNTWVELY
STGFSSK GG LVFS LSI VH ++ L+ I PLSTLSVLRDNDAVVEIELP+PDTLPTSA+SS S+S+TW+ELY
Subjt: STGFSSKRGGSLVFSGVLSILGVHFESEALFGYI-----------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSNTWVELY
Query: IESVY------------------YEGQRVSLKEDDVRWLHTIFRTKLAGGLGGGST-SKSI-------WRAARVQSA
ESV+ +EG ++ DDV WLH IFR K AGG GGG T SKS+ WR + S+
Subjt: IESVY------------------YEGQRVSLKEDDVRWLHTIFRTKLAGGLGGGST-SKSI-------WRAARVQSA
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| A0A5A7TKT0 Reverse transcriptase | 1.3e-23 | 52.7 | Show/hide |
Query: SSKRGGSLVFSGVLSILGVHFESEALFGYI-PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSNTWVELYIESV------YYEGQRVS--------
SSK GG +VF LSIL VH ++ L+ I LSTLSVLRDNDAVVEIELPVPDTLPTSA+S S+S+TW+ELY ESV Y+ Q +S
Subjt: SSKRGGSLVFSGVLSILGVHFESEALFGYI-PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSNTWVELYIESV------YYEGQRVS--------
Query: -----LKEDDVRWLHTIFRTKLAGGLGGGST-----SKSIWRAARVQS
++ DDV WLH +FR K AGG GGG T S+S R+ V S
Subjt: -----LKEDDVRWLHTIFRTKLAGGLGGGST-----SKSIWRAARVQS
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| A0A5A7TKT0 Reverse transcriptase | 1.6e-07 | 52.38 | Show/hide |
Query: RGNRSSLQTRELDKK-----------------VEIKLPVPDTLPTSAESSRSSSNTWVELYIESVYYVNVLFYVSGGSTGIVRG
RGNR SLQT ELDK VEI+LP+PDTLPTSAESS S+S+T +ELY ESV+ +F GS GI+RG
Subjt: RGNRSSLQTRELDKK-----------------VEIKLPVPDTLPTSAESSRSSSNTWVELYIESVYYVNVLFYVSGGSTGIVRG
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| A0A5A7V9N3 Reverse transcriptase | 7.3e-24 | 46.99 | Show/hide |
Query: TGFSSKRGGSLVFSGVLSILGVHFESEALFGYI------------------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSN
TGFSSK GG LVFS LSIL VH ++ L+ I PLSTLSVLRDNDAVVEIELPVPDTLPTSA+SS S+S+
Subjt: TGFSSKRGGSLVFSGVLSILGVHFESEALFGYI------------------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSN
Query: TWVELYIESVYYE---------------------GQRVSLKEDDVRWLHTIFRTKLAGGLGGGSTS
TW+ELY ESV+ E G ++ DDV WLH +FR K GG GGG T+
Subjt: TWVELYIESVYYE---------------------GQRVSLKEDDVRWLHTIFRTKLAGGLGGGSTS
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| A0A5D3DR18 Gag/pol protein | 6.0e-26 | 48.02 | Show/hide |
Query: STGFSSKRGGSLVFSGVLSILGVHFESEALFGYI-----------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSNTWVELY
STGFSSK GG LVFS LSI VH ++ L+ I PLSTLSVLRDNDAVVEIELP+PDTLPTSA+SS S+S+TW+ELY
Subjt: STGFSSKRGGSLVFSGVLSILGVHFESEALFGYI-----------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSNTWVELY
Query: IESVY------------------YEGQRVSLKEDDVRWLHTIFRTKLAGGLGGGST-SKSI-------WRAARVQSA
ESV+ +EG ++ DDV WLH IFR K AGG GGG T SKS+ WR + S+
Subjt: IESVY------------------YEGQRVSLKEDDVRWLHTIFRTKLAGGLGGGST-SKSI-------WRAARVQSA
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| A0A5D3DSY7 Putative Retrotransposon protein | 7.3e-24 | 46.99 | Show/hide |
Query: TGFSSKRGGSLVFSGVLSILGVHFESEALFGYI------------------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSN
TGFSSK GG LVFS LSIL VH ++ L+ I PLSTLSVLRDNDAVVEIELPVPDTLPTSA+SS S+S+
Subjt: TGFSSKRGGSLVFSGVLSILGVHFESEALFGYI------------------------------PLSTLSVLRDNDAVVEIELPVPDTLPTSAKSSISSSN
Query: TWVELYIESVYYE---------------------GQRVSLKEDDVRWLHTIFRTKLAGGLGGGSTS
TW+ELY ESV+ E G ++ DDV WLH +FR K GG GGG T+
Subjt: TWVELYIESVYYE---------------------GQRVSLKEDDVRWLHTIFRTKLAGGLGGGSTS
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