; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026876 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026876
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold13:25974541..25975748
RNA-Seq ExpressionSpg026876
SyntenySpg026876
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]2.2e-0931.38Show/hide
Query:  LSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALR----------------------------------------
        LS  + QKII TPF+++  L+ E  KI  AI+ + + +L  LKE+V  YF   ++   +R                                        
Subjt:  LSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALR----------------------------------------

Query:  ------EEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKWIP
              +E +LEA+L  V+ +  ++S  I + E  LKQ Q E SK    I  ++ A I+ +ADAK L+ LR  LE+  EELKN KW P
Subjt:  ------EEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKWIP

KAA0048242.1 hypothetical protein E6C27_scaffold63G001580 [Cucumis melo var. makuwa]3.8e-1436.43Show/hide
Query:  LSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALREEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKL
        L + I  KI+ TPF+ I RL  E    L  I +  A  L PL+E +++Y  +++  Q   E++ELE RL ++ A+  ++S    EK D + Q +LE  KL
Subjt:  LSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALREEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKL

Query:  RGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKW
        +  ++++E  P +T    K L  +R  +E AQEE KN+KW
Subjt:  RGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKW

KAA0066958.1 hypothetical protein E6C27_scaffold550G00980 [Cucumis melo var. makuwa]3.0e-1132.59Show/hide
Query:  IHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALREEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTI
        I  KI+ TPF+ IPRL  E   +L  I +  A  L  L+E +++   +++  +   E +ELE RL ++ A+  ++S    EK + + Q +LE +KL+  +
Subjt:  IHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALREEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTI

Query:  SSIEDAPILTNADAKTLTILRGMLEDAQEELKNYK
        +++E  P +T    + L  +R  +E A+EE KN+K
Subjt:  SSIEDAPILTNADAKTLTILRGMLEDAQEELKNYK

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]2.8e-0931.38Show/hide
Query:  LSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALR----------------------------------------
        LS  + QKII TPF+++  L+ E  KI  AI+ + + +L  LKE+V  YF   ++   +R                                        
Subjt:  LSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALR----------------------------------------

Query:  ------EEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKWIP
              +E +LEA+L  V+ +  ++S  I + E  LKQ Q E SK    I  ++ A I+ +ADAK L  LR  LE+  EELKN KW P
Subjt:  ------EEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKWIP

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]2.1e-1231.3Show/hide
Query:  CLVILKDRDQPVENGVILHVGEVVHGNFKTLQPSL--DSSRVLSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYF-----NKQ
        C  ++K   Q VE    + V E+ H    +L   L   ++  L   + QKII TPF+++  LE E  KI  AI+ + + +L  L+E+V+ YF     + Q
Subjt:  CLVILKDRDQPVENGVILHVGEVVHGNFKTLQPSL--DSSRVLSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYF-----NKQ

Query:  QH----LQALRE-------------------------------------EEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPI
         H    LQ+ ++                                     E +LEA+L  V+A+  ++S  I + +  LKQ Q E SK    I  +E API
Subjt:  QH----LQALRE-------------------------------------EEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPI

Query:  LTNADAKTLTILRGMLEDAQEELKNYKWIP
        + + DAK L+ LR  LE   EELKN+KW P
Subjt:  LTNADAKTLTILRGMLEDAQEELKNYKWIP

TrEMBL top hitse value%identityAlignment
A0A2N9GDD1 Protein DETOXIFICATION6.2e-1032.1Show/hide
Query:  VLSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLK-------------------EIVSAYFN---KQQHLQALREEEELEARLVAVKAKRG
        +L   + +KII TPFD +  L++E  KI+HAI +T   D+ PL+                   E + A ++   + +  + L  E EL   L  +  +RG
Subjt:  VLSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLK-------------------EIVSAYFN---KQQHLQALREEEELEARLVAVKAKRG

Query:  EISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYK
        ++  SI  +E+ L Q Q+  S+++  IS IE  P    +D   L  LR +LE +QEELKN++
Subjt:  EISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYK

A0A2N9GHR5 Uncharacterized protein6.2e-1033.33Show/hide
Query:  VLSRCIHQKIIPTPFDKIPRLEQETVKILHAISET-----RAPDLDPLKEIVSAYFNKQ------------QHLQALREEEELEARLVAVKAKRGEISKS
        +L   + +KII TPFD +  L++E  KI+HAI +T     R  D   L   +  + N++            +  + L +E EL   L  +  +RG++  S
Subjt:  VLSRCIHQKIIPTPFDKIPRLEQETVKILHAISET-----RAPDLDPLKEIVSAYFNKQ------------QHLQALREEEELEARLVAVKAKRGEISKS

Query:  IVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKWI
        I   E+ L Q Q   S+++  IS IE  P L  +D   L  LR +LE ++EELKN  WI
Subjt:  IVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKWI

A0A2N9J4K8 Uncharacterized protein3.6e-1033.96Show/hide
Query:  VLSRCIHQKIIPTPFDKIPRLEQETVKILHAISET-----RAPDLDPLKEIVSAYFN------------KQQHLQALREEEELEARLVAVKAKRGEISKS
        +L   + +KII TPFD +  L++E  KI+HAI +T     R  D   L   +  + N            K +  + L +E EL   L  +  +RG++  S
Subjt:  VLSRCIHQKIIPTPFDKIPRLEQETVKILHAISET-----RAPDLDPLKEIVSAYFN------------KQQHLQALREEEELEARLVAVKAKRGEISKS

Query:  IVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKWI
        I   E+ L Q Q   S+++  IS IE  P L  +D   L  LR +LE ++EELKN  WI
Subjt:  IVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKWI

A0A5D3C961 Uncharacterized protein1.9e-1436.43Show/hide
Query:  LSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALREEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKL
        L + I  KI+ TPF+ I RL  E    L  I +  A  L PL+E +++Y  +++  Q   E++ELE RL ++ A+  ++S    EK D + Q +LE  KL
Subjt:  LSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALREEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKL

Query:  RGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKW
        +  ++++E  P +T    K L  +R  +E AQEE KN+KW
Subjt:  RGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKW

A0A5D3CS52 Uncharacterized protein1.5e-1132.59Show/hide
Query:  IHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALREEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTI
        I  KI+ TPF+ IPRL  E   +L  I +  A  L  L+E +++   +++  +   E +ELE RL ++ A+  ++S    EK + + Q +LE +KL+  +
Subjt:  IHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALREEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTI

Query:  SSIEDAPILTNADAKTLTILRGMLEDAQEELKNYK
        +++E  P +T    + L  +R  +E A+EE KN+K
Subjt:  SSIEDAPILTNADAKTLTILRGMLEDAQEELKNYK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTATTTCACTGAGCATCCTGATCCTGAGAAAAACTGCTTAGTTATCTTGAAGGATAGAGATCAACCTGTTGAAAATGGAGTCATTCTTCATGTAGGAGAGGTGGT
GCATGGAAACTTTAAGACATTGCAGCCTTCCTTAGATAGTTCTAGAGTCCTATCTAGATGCATACACCAGAAGATCATACCCACTCCCTTCGACAAAATACCTCGTCTTG
AACAAGAGACAGTCAAAATACTTCATGCAATTTCTGAGACTCGTGCACCTGACTTGGATCCTCTTAAAGAAATTGTAAGTGCGTATTTCAATAAGCAACAACATCTACAA
GCATTGCGAGAAGAAGAAGAATTGGAAGCTAGGCTTGTAGCTGTGAAAGCTAAAAGAGGTGAGATTTCTAAGTCAATTGTCGAGAAGGAGGATCTTTTAAAACAACATCA
ACTCGAGGATTCCAAACTGCGAGGAACTATAAGTAGTATTGAAGATGCCCCTATTCTTACTAATGCTGATGCCAAAACTTTGACGATACTTCGTGGAATGTTGGAAGATG
CACAAGAAGAGCTGAAGAACTACAAGTGGATACCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTATTTCACTGAGCATCCTGATCCTGAGAAAAACTGCTTAGTTATCTTGAAGGATAGAGATCAACCTGTTGAAAATGGAGTCATTCTTCATGTAGGAGAGGTGGT
GCATGGAAACTTTAAGACATTGCAGCCTTCCTTAGATAGTTCTAGAGTCCTATCTAGATGCATACACCAGAAGATCATACCCACTCCCTTCGACAAAATACCTCGTCTTG
AACAAGAGACAGTCAAAATACTTCATGCAATTTCTGAGACTCGTGCACCTGACTTGGATCCTCTTAAAGAAATTGTAAGTGCGTATTTCAATAAGCAACAACATCTACAA
GCATTGCGAGAAGAAGAAGAATTGGAAGCTAGGCTTGTAGCTGTGAAAGCTAAAAGAGGTGAGATTTCTAAGTCAATTGTCGAGAAGGAGGATCTTTTAAAACAACATCA
ACTCGAGGATTCCAAACTGCGAGGAACTATAAGTAGTATTGAAGATGCCCCTATTCTTACTAATGCTGATGCCAAAACTTTGACGATACTTCGTGGAATGTTGGAAGATG
CACAAGAAGAGCTGAAGAACTACAAGTGGATACCGTGA
Protein sequenceShow/hide protein sequence
MVYFTEHPDPEKNCLVILKDRDQPVENGVILHVGEVVHGNFKTLQPSLDSSRVLSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQ
ALREEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKWIP