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Spg026885 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026885
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransmembrane protein
Genome locationscaffold13:25848614..25849098
RNA-Seq ExpressionSpg026885
SyntenySpg026885
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607234.1 hypothetical protein SDJN03_00576, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2755.24Show/hide
Query:  LHLIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKT---------------------------------------------TKMRGDISEKGSRNRI
        L LIPSETN+TREITRNPLE+RHGLDLE G  EDLLLKT                                              K RGD S KGSRNR 
Subjt:  LHLIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKT---------------------------------------------TKMRGDISEKGSRNRI

Query:  LSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFES
        LSDIIT I+T FFTP+ S PLKASPL SLDSYKLH FNPLFES
Subjt:  LSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFES

XP_022948541.1 uncharacterized protein LOC111452187 [Cucurbita moschata]1.4e-2755.24Show/hide
Query:  LHLIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKT---------------------------------------------TKMRGDISEKGSRNRI
        L LIPSETN+TREITRNPLE+RHGLDLE G  EDLLLKT                                              K RGD S KGSRNR 
Subjt:  LHLIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKT---------------------------------------------TKMRGDISEKGSRNRI

Query:  LSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFES
        LSDIIT I+T FFTP+ S PLKASPL SLDSYKLH FNPLFES
Subjt:  LSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFES

XP_022997949.1 uncharacterized protein LOC111492746 [Cucurbita maxima]1.9e-2750.31Show/hide
Query:  QRLKTTSITKVSLH------LIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKTT------------------------------------------
        +R+ TT + + + +       IPSETN+TREITRNPLE+RHGLDLE G  EDLLLKTT                                          
Subjt:  QRLKTTSITKVSLH------LIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKTT------------------------------------------

Query:  ---KMRGDISEKGSRNRILSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFESLA
           K RGD S KGSRNR LSDIIT I+T FFTP+ S PLKASPL SLDSYKLH FNPLFES A
Subjt:  ---KMRGDISEKGSRNRILSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFESLA

XP_023523159.1 uncharacterized protein LOC111787432 [Cucurbita pepo subsp. pepo]7.7e-2956.16Show/hide
Query:  SLHLIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKTT---------------------------------------------KMRGDISEKGSRNR
        SL LIPSETN+TREITRNPLE+RHGLDLE G  EDLLLKTT                                             K RGD S KGSRNR
Subjt:  SLHLIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKTT---------------------------------------------KMRGDISEKGSRNR

Query:  ILSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFESLA
         LSDIIT I+T FFTP+ S PLKASPL SLDSYKLH FNPLFES A
Subjt:  ILSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFESLA

XP_038893882.1 uncharacterized protein LOC120082683 [Benincasa hispida]4.2e-1950Show/hide
Query:  SLHLIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKTT-----------------------------------KMRGDI------SEKGSRNRILSD
        SLHLIPSE       TRNP E+R G DLELG  ED LLKTT                                   + + D+      S KGSRNR LSD
Subjt:  SLHLIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKTT-----------------------------------KMRGDI------SEKGSRNRILSD

Query:  IITMIQTSFFTPMVSSPLKASPLSSLDS--YKLHGFNPLFES
        II  I T FFTPM S PLKASPLSSL+S  YKLHGFNPLFES
Subjt:  IITMIQTSFFTPMVSSPLKASPLSSLDS--YKLHGFNPLFES

TrEMBL top hitse value%identityAlignment
A0A6J1G9H1 uncharacterized protein LOC1114521877.0e-2855.24Show/hide
Query:  LHLIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKT---------------------------------------------TKMRGDISEKGSRNRI
        L LIPSETN+TREITRNPLE+RHGLDLE G  EDLLLKT                                              K RGD S KGSRNR 
Subjt:  LHLIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKT---------------------------------------------TKMRGDISEKGSRNRI

Query:  LSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFES
        LSDIIT I+T FFTP+ S PLKASPL SLDSYKLH FNPLFES
Subjt:  LSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFES

A0A6J1I5Z4 uncharacterized protein LOC1114695068.3e-1347.27Show/hide
Query:  TRNPLEDRHGLDLELGCSED---------------------LLLKTTKMRGDISEKGSRNRILSDIITMIQTSFFTPMVSSPLKAS-----PLSSLDSYK
        T NP E RHGL+LEL   ++                     L     +   D+  + SR R LSDIIT I+T +FTPM S PLKAS     PLS LDSYK
Subjt:  TRNPLEDRHGLDLELGCSED---------------------LLLKTTKMRGDISEKGSRNRILSDIITMIQTSFFTPMVSSPLKAS-----PLSSLDSYK

Query:  LHGFNPLFES
        LHGFNPLFES
Subjt:  LHGFNPLFES

A0A6J1KBC0 uncharacterized protein LOC1114927469.2e-2850.31Show/hide
Query:  QRLKTTSITKVSLH------LIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKTT------------------------------------------
        +R+ TT + + + +       IPSETN+TREITRNPLE+RHGLDLE G  EDLLLKTT                                          
Subjt:  QRLKTTSITKVSLH------LIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKTT------------------------------------------

Query:  ---KMRGDISEKGSRNRILSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFESLA
           K RGD S KGSRNR LSDIIT I+T FFTP+ S PLKASPL SLDSYKLH FNPLFES A
Subjt:  ---KMRGDISEKGSRNRILSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFESLA

A0A6P6FW46 uncharacterized protein LOC1074110783.7e-1342.65Show/hide
Query:  PSETNTTREIT---RNPLEDRHGLDLELGCS-EDLLLKTT--------------------------------------KMRGDISEKGSRNRILSDIITM
        P  TN T+EI     + + + H  DLELG S +DLLLKT                                       K RGD S KGSR R LSD+I  
Subjt:  PSETNTTREIT---RNPLEDRHGLDLELGCS-EDLLLKTT--------------------------------------KMRGDISEKGSRNRILSDIITM

Query:  IQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFES
        + T F TP+ S PLK+SPL+ LDSYK HGFNPLFES
Subjt:  IQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFES

M5WLR5 Uncharacterized protein5.4e-1262.12Show/hide
Query:  EDLLLKTTKMRGDISEKGSRNRILSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFES
        EDL  +  K RGD S KGSR R LSD+I  + T + +P+ S  LK+SPLSSLDSYK HGFNPLFES
Subjt:  EDLLLKTTKMRGDISEKGSRNRILSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G59350.1 unknown protein6.3e-0556.25Show/hide
Query:  SRNRILSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFES
        SR R LSD+     T  FTP+ +SP K+S  S L+SY  HGFNPLFES
Subjt:  SRNRILSDIITMIQTSFFTPMVSSPLKASPLSSLDSYKLHGFNPLFES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAAGAAAAAAGAGAATCACCATTACAGAGGTTGAAGACGACGAGTATAACAAAAGTGTCACTTCATTTGATTCCTTCTGAAACCAACACCACTCGCGAAATTAC
CAGAAACCCACTTGAGGACCGCCATGGATTGGACCTCGAGCTCGGCTGCAGTGAAGATTTGTTGTTGAAGACGACGAAGATGAGAGGCGATATAAGCGAAAAAGGATCGA
GAAACAGAATCTTGAGTGATATAATCACAATGATTCAAACGTCGTTCTTCACTCCAATGGTTTCTTCGCCATTGAAGGCTTCTCCTCTGAGCTCTTTAGACTCGTACAAG
CTCCATGGATTCAATCCCCTCTTTGAATCGTTGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAAGAAAAAAGAGAATCACCATTACAGAGGTTGAAGACGACGAGTATAACAAAAGTGTCACTTCATTTGATTCCTTCTGAAACCAACACCACTCGCGAAATTAC
CAGAAACCCACTTGAGGACCGCCATGGATTGGACCTCGAGCTCGGCTGCAGTGAAGATTTGTTGTTGAAGACGACGAAGATGAGAGGCGATATAAGCGAAAAAGGATCGA
GAAACAGAATCTTGAGTGATATAATCACAATGATTCAAACGTCGTTCTTCACTCCAATGGTTTCTTCGCCATTGAAGGCTTCTCCTCTGAGCTCTTTAGACTCGTACAAG
CTCCATGGATTCAATCCCCTCTTTGAATCGTTGGCATAA
Protein sequenceShow/hide protein sequence
MVEEKRESPLQRLKTTSITKVSLHLIPSETNTTREITRNPLEDRHGLDLELGCSEDLLLKTTKMRGDISEKGSRNRILSDIITMIQTSFFTPMVSSPLKASPLSSLDSYK
LHGFNPLFESLA