; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026892 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026892
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold13:23155792..23158188
RNA-Seq ExpressionSpg026892
SyntenySpg026892
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]1.4e-0939.6Show/hide
Query:  PLVREFYAGLREESISMTVVRGRWNPSAKQMKDALKLVANKGVQWKESQTKVKSLVSSDLKPESAVWLHFIKNRLMPTTHDNMISVDRVMLLYCLMKGVK
        P V     GLR+ ++   + +    PS   M++AL+ VA  G++W  +  K   L   +LK  ++VWL FIK  LMPT HDN IS++R+MLLYC+M+ + 
Subjt:  PLVREFYAGLREESISMTVVRGRWNPSAKQMKDALKLVANKGVQWKESQTKVKSLVSSDLKPESAVWLHFIKNRLMPTTHDNMISVDRVMLLYCLMKGVK

Query:  I
        +
Subjt:  I

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]6.3e-1040Show/hide
Query:  LVREFYAGLREESISMTVVRGRWNPSAKQMKDALKLVANKGVQWKESQTKVKSLVSSDLKPESAVWLHFIKNRLMPTTHDNMISVDRVMLLYCLMKGVKI
        +V+ FY G  +      +V+ R  PS   M++AL+ VA    +W  +  K   L   +L  E++VWL FIK +LMPT HDN IS +R+MLLYC+M+ + +
Subjt:  LVREFYAGLREESISMTVVRGRWNPSAKQMKDALKLVANKGVQWKESQTKVKSLVSSDLKPESAVWLHFIKNRLMPTTHDNMISVDRVMLLYCLMKGVKI

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.0e-1132.17Show/hide
Query:  EDFCVHPQEAVVPLVREFYAGLREESISMTVVRG---RWNPSA-----------------------KQMKDALKLVANKGVQWKESQTKVKSLVSSDLKP
        + FC HP++ +VPLVREFYA L +   +   VRG    W+  A                         +   L+ VA  G +W  S     + + S L P
Subjt:  EDFCVHPQEAVVPLVREFYAGLREESISMTVVRG---RWNPSA-----------------------KQMKDALKLVANKGVQWKESQTKVKSLVSSDLKP

Query:  ESAVWLHFIKNRLMPTTHDNMISVDRVMLLYCLMKGVKIIPGK
         + VW HF+K+ L+PTTH   +S DR++LL+ ++ G  I  G+
Subjt:  ESAVWLHFIKNRLMPTTHDNMISVDRVMLLYCLMKGVKIIPGK

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.7e-1526.18Show/hide
Query:  EDFCVHPQEAVVPLVREFYAGLREESISMTVVRG---RWNPSA-----------------------KQMKDALKLVANKGVQWKESQTKVKSLVSSDLKP
        + FC HP++ +VPLVREFYA L +   +   VRG    W+  A                       + +   L+ VA  G +W  S     + + S L P
Subjt:  EDFCVHPQEAVVPLVREFYAGLREESISMTVVRG---RWNPSA-----------------------KQMKDALKLVANKGVQWKESQTKVKSLVSSDLKP

Query:  ESAVWLHFIKNRLMPTTHDNMISVDRVMLLYCLMKGVKIIPGK-----------DEERHFFKPTIDLSLIGNLQQNSIQRKDKA-STSHVTPPAGSNVAS
         + VW HF+K+RL+PTTH   +S DR++LL+ ++ G  I  G+            +    F P++   L  N +   +  ++K  +T  +   A + +A 
Subjt:  ESAVWLHFIKNRLMPTTHDNMISVDRVMLLYCLMKGVKIIPGK-----------DEERHFFKPTIDLSLIGNLQQNSIQRKDKA-STSHVTPPAGSNVAS

Query:  PSLHTPFTRPSPSSEALAIAYRQLDQIRENLKT----------------------------YWAYAKERDEVIRKFYLSIAPSIAPVFPNFPQSLLPQEK
                +PS S  A A + R    I + LK                             +WAY+KERD  ++K   +      P FP FPQ +L    
Subjt:  PSLHTPFTRPSPSSEALAIAYRQLDQIRENLKT----------------------------YWAYAKERDEVIRKFYLSIAPSIAPVFPNFPQSLLPQEK

Query:  KDSDEEEDEENEDEEKE
         + + E D++  +E  E
Subjt:  KDSDEEEDEENEDEEKE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.6e-1126.26Show/hide
Query:  VPLVREFYAGLREESISMTVVRG---RWNPSA-----------------------KQMKDALKLVANKGVQWKESQTKVKSLVSSDLKPESAVWLHFIKN
        +PLVREFYA L +   +   VRG    W+  A                        ++   L+ VA  G +W  S     + + S L P + VW HF+K+
Subjt:  VPLVREFYAGLREESISMTVVRG---RWNPSA-----------------------KQMKDALKLVANKGVQWKESQTKVKSLVSSDLKPESAVWLHFIKN

Query:  RLMPTTHDNMISVDRVMLLYCLMKGVKIIPGK-----------DEERHFFKPTIDLSLIGNLQQNS---IQRKDKASTSHVTPPAGSNVASPSLHTPFTR
        RL+PTTH  ++S DR++LL+ ++ G  I  G+            +    F P    SLI  L +N+   +  +   +T  +   A + +          +
Subjt:  RLMPTTHDNMISVDRVMLLYCLMKGVKIIPGK-----------DEERHFFKPTIDLSLIGNLQQNS---IQRKDKASTSHVTPPAGSNVASPSLHTPFTR

Query:  PSPSSEALAIAYRQLDQIRENLKT-----------------YWAYAKERDEVIRKFYLSIAPSIAPVFPNFPQSLLPQEKKDSDEEEDEENEDEEKE
        PS S  A A + R    + + LK                  +WAY+KERD  ++K   +      P FP FPQ +L     + + E D++  +E  E
Subjt:  PSPSSEALAIAYRQLDQIRENLKT-----------------YWAYAKERDEVIRKFYLSIAPSIAPVFPNFPQSLLPQEKKDSDEEEDEENEDEEKE

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)9.5e-1232.17Show/hide
Query:  EDFCVHPQEAVVPLVREFYAGLREESISMTVVRG---RWNPSA-----------------------KQMKDALKLVANKGVQWKESQTKVKSLVSSDLKP
        + FC HP++ +VPLVREFYA L +   +   VRG    W+  A                         +   L+ VA  G +W  S     + + S L P
Subjt:  EDFCVHPQEAVVPLVREFYAGLREESISMTVVRG---RWNPSA-----------------------KQMKDALKLVANKGVQWKESQTKVKSLVSSDLKP

Query:  ESAVWLHFIKNRLMPTTHDNMISVDRVMLLYCLMKGVKIIPGK
         + VW HF+K+ L+PTTH   +S DR++LL+ ++ G  I  G+
Subjt:  ESAVWLHFIKNRLMPTTHDNMISVDRVMLLYCLMKGVKIIPGK

A0A2P5BCG4 Uncharacterized protein (Fragment)8.3e-1626.18Show/hide
Query:  EDFCVHPQEAVVPLVREFYAGLREESISMTVVRG---RWNPSA-----------------------KQMKDALKLVANKGVQWKESQTKVKSLVSSDLKP
        + FC HP++ +VPLVREFYA L +   +   VRG    W+  A                       + +   L+ VA  G +W  S     + + S L P
Subjt:  EDFCVHPQEAVVPLVREFYAGLREESISMTVVRG---RWNPSA-----------------------KQMKDALKLVANKGVQWKESQTKVKSLVSSDLKP

Query:  ESAVWLHFIKNRLMPTTHDNMISVDRVMLLYCLMKGVKIIPGK-----------DEERHFFKPTIDLSLIGNLQQNSIQRKDKA-STSHVTPPAGSNVAS
         + VW HF+K+RL+PTTH   +S DR++LL+ ++ G  I  G+            +    F P++   L  N +   +  ++K  +T  +   A + +A 
Subjt:  ESAVWLHFIKNRLMPTTHDNMISVDRVMLLYCLMKGVKIIPGK-----------DEERHFFKPTIDLSLIGNLQQNSIQRKDKA-STSHVTPPAGSNVAS

Query:  PSLHTPFTRPSPSSEALAIAYRQLDQIRENLKT----------------------------YWAYAKERDEVIRKFYLSIAPSIAPVFPNFPQSLLPQEK
                +PS S  A A + R    I + LK                             +WAY+KERD  ++K   +      P FP FPQ +L    
Subjt:  PSLHTPFTRPSPSSEALAIAYRQLDQIRENLKT----------------------------YWAYAKERDEVIRKFYLSIAPSIAPVFPNFPQSLLPQEK

Query:  KDSDEEEDEENEDEEKE
         + + E D++  +E  E
Subjt:  KDSDEEEDEENEDEEKE

A0A2P5DXM3 Uncharacterized protein1.2e-1126.26Show/hide
Query:  VPLVREFYAGLREESISMTVVRG---RWNPSA-----------------------KQMKDALKLVANKGVQWKESQTKVKSLVSSDLKPESAVWLHFIKN
        +PLVREFYA L +   +   VRG    W+  A                        ++   L+ VA  G +W  S     + + S L P + VW HF+K+
Subjt:  VPLVREFYAGLREESISMTVVRG---RWNPSA-----------------------KQMKDALKLVANKGVQWKESQTKVKSLVSSDLKPESAVWLHFIKN

Query:  RLMPTTHDNMISVDRVMLLYCLMKGVKIIPGK-----------DEERHFFKPTIDLSLIGNLQQNS---IQRKDKASTSHVTPPAGSNVASPSLHTPFTR
        RL+PTTH  ++S DR++LL+ ++ G  I  G+            +    F P    SLI  L +N+   +  +   +T  +   A + +          +
Subjt:  RLMPTTHDNMISVDRVMLLYCLMKGVKIIPGK-----------DEERHFFKPTIDLSLIGNLQQNS---IQRKDKASTSHVTPPAGSNVASPSLHTPFTR

Query:  PSPSSEALAIAYRQLDQIRENLKT-----------------YWAYAKERDEVIRKFYLSIAPSIAPVFPNFPQSLLPQEKKDSDEEEDEENEDEEKE
        PS S  A A + R    + + LK                  +WAY+KERD  ++K   +      P FP FPQ +L     + + E D++  +E  E
Subjt:  PSPSSEALAIAYRQLDQIRENLKT-----------------YWAYAKERDEVIRKFYLSIAPSIAPVFPNFPQSLLPQEKKDSDEEEDEENEDEEKE

A0A6A3CYH7 Eukaryotic translation initiation factor 3 subunit I9.2e-0725.19Show/hide
Query:  HPQEAVVPLVREFYAGLRE--ESISMTVVRGRWNPSAKQMKDALKLVANKGVQWKESQTKVKSLVSSDLKPESAVWLHFIKNRLMPTTHDNMISVDRVML
        HP      LV+ FYA + E  E + MT V                       QW   Q   +++    L+P + +W HF+K++L+PT+H+  +S  R+  
Subjt:  HPQEAVVPLVREFYAGLRE--ESISMTVVRGRWNPSAKQMKDALKLVANKGVQWKESQTKVKSLVSSDLKPESAVWLHFIKNRLMPTTHDNMISVDRVML

Query:  LYCLMKGVKIIPGK--DEERH--FFKPTIDLS----LIGNLQQNSIQRKDKASTSHVTPPAGSNVASPSLHTPFTRPSPSSEALAIAYRQLDQIRENLKT
        L+ ++ G  I   K   E+ H    +P   L+    L+G  +    ++ +  S + VTP A +            +P    E +     Q++Q+ + + T
Subjt:  LYCLMKGVKIIPGK--DEERH--FFKPTIDLS----LIGNLQQNSIQRKDKASTSHVTPPAGSNVASPSLHTPFTRPSPSSEALAIAYRQLDQIRENLKT

Query:  YWAYAKERDEVIRKFYLSIAPSIAPVFPNFPQSLLPQEKKDSDEEEDEENEDEEKESSSDEE
        Y++Y K RDE +   ++ I P      P FP +LL   +     E+  +  +EE    +DEE
Subjt:  YWAYAKERDEVIRKFYLSIAPSIAPVFPNFPQSLLPQEKKDSDEEEDEENEDEEKESSSDEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAGTTCATCTACACCAAGGAGGTTCACGCACGTCGCCGCTGTCCATCAAACCCAAAAACCCGCCGCTCAACAGTTCAAGAAACGTTCGCGGGAGTGGTTTGCGAT
GATCCGAGAGATGGGTGCTCAGAGACGTGCTGTCCTTGAAGAGGAAGGGAATTGGCAAGATGAAAAAAAAGTCGCCAAGGCAGTTGGAAGCTCTCGGCAAGGAAAAAACT
CAATGGGTAAGGTTTTTGAACCTTCAACTAACCCCTCTTTATCTTGCAGGATCAAGCCCGTTGTTACTTACAGCGCAAGAAAGAGGAGCCTGAAGAAAAATGTGCCTGAA
AAACTGCTTGAGGTCAAGCCCTTCAAAACCGCAAGGATGCCTCCGGATGTATTCGAAGGAATAATTGGCCAAGCAGTGGCAAACGCTCTTGCGATTGCTGAAGGGTACAA
AGCTGAACAGGATGCTTTGAAAGAGATTGAGGATGAGAGAGAGATGGAAAATCAGAAAATGGTTGAGGAAGACGAGCTTGCAAAAGAAAGAGACTATGAAGAAGATAAAA
GAAGAAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCTGAGGAAGTAAGAAAGTATGAAGAAAACCTCAGGAGGGCAGCTATGGATTTGCAACTCCTTGAGGAA
GAGAAAAGGAGAAGGGAAGAAATAAAAGAAGATGAAAAAAGAAGGAAGGAAGCGGAAGACTTCTTTGCAACTTTTGAGCCACTCCACAAGGCTCAAAGTGAGAATGCGAC
CACATCTAGGCCGCATTCTGAAGAAGGCCTAGTCGAGGCCACCGTTGATCAGCCAGCTGAAGAGGTTTTTGAGCCTCTATTCACGAATGACCCACCAGCTGCTGACAGCA
CCTCTTCAGGAGAGAAGAGGGACGAAGAAGAAAAGGAAGATGAGGAGGCCGAGACCTCCACTGACTCTCATACAAAATCCGATTCAGAGATAAGGGAGCTAGATGGTGAC
CAAAGGGCGAGGACGAGGTCCATGGACTCCTCTTCTACAGTTCCTCCTACCATCTCACTCGCCAAGCCAAAGGGCAAATCACCCAAGGCTGCATCTCCTAGAAATCTGTT
CCCTGAGGACTTCTGTGTTCACCCTCAGGAGGCTGTTGTGCCTCTAGTTCGAGAGTTTTACGCTGGCCTGAGGGAGGAGAGTATTAGCATGACGGTTGTGAGGGGAAGAT
GGAACCCTTCGGCCAAGCAAATGAAGGATGCATTAAAACTTGTGGCCAACAAGGGGGTCCAATGGAAAGAATCACAGACCAAAGTGAAGTCTTTAGTGTCAAGCGACCTA
AAGCCAGAATCGGCAGTTTGGCTTCACTTCATCAAGAACCGTTTGATGCCAACCACCCATGACAACATGATTTCAGTGGATAGAGTGATGCTACTCTATTGCCTTATGAA
GGGGGTGAAGATCATTCCGGGCAAGGACGAGGAGCGTCACTTCTTCAAGCCGACCATCGACCTGTCCTTGATCGGGAATCTCCAACAGAATAGTATCCAGAGGAAAGACA
AAGCCTCTACATCTCATGTTACTCCACCTGCAGGGTCGAATGTAGCTTCTCCATCCCTGCACACTCCTTTCACAAGGCCTTCACCATCGTCAGAAGCCCTAGCCATTGCC
TACCGCCAGCTAGATCAAATCAGGGAGAACCTGAAAACATATTGGGCATATGCAAAGGAGCGGGATGAAGTCATTAGAAAGTTCTATCTCTCTATTGCCCCAAGTATTGC
TCCGGTCTTTCCAAATTTCCCTCAGTCGCTGCTGCCCCAGGAAAAGAAGGATTCTGATGAAGAGGAAGATGAAGAGAATGAAGATGAAGAGAAAGAGAGTTCCTCGGACG
AGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGAGTTCATCTACACCAAGGAGGTTCACGCACGTCGCCGCTGTCCATCAAACCCAAAAACCCGCCGCTCAACAGTTCAAGAAACGTTCGCGGGAGTGGTTTGCGAT
GATCCGAGAGATGGGTGCTCAGAGACGTGCTGTCCTTGAAGAGGAAGGGAATTGGCAAGATGAAAAAAAAGTCGCCAAGGCAGTTGGAAGCTCTCGGCAAGGAAAAAACT
CAATGGGTAAGGTTTTTGAACCTTCAACTAACCCCTCTTTATCTTGCAGGATCAAGCCCGTTGTTACTTACAGCGCAAGAAAGAGGAGCCTGAAGAAAAATGTGCCTGAA
AAACTGCTTGAGGTCAAGCCCTTCAAAACCGCAAGGATGCCTCCGGATGTATTCGAAGGAATAATTGGCCAAGCAGTGGCAAACGCTCTTGCGATTGCTGAAGGGTACAA
AGCTGAACAGGATGCTTTGAAAGAGATTGAGGATGAGAGAGAGATGGAAAATCAGAAAATGGTTGAGGAAGACGAGCTTGCAAAAGAAAGAGACTATGAAGAAGATAAAA
GAAGAAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCTGAGGAAGTAAGAAAGTATGAAGAAAACCTCAGGAGGGCAGCTATGGATTTGCAACTCCTTGAGGAA
GAGAAAAGGAGAAGGGAAGAAATAAAAGAAGATGAAAAAAGAAGGAAGGAAGCGGAAGACTTCTTTGCAACTTTTGAGCCACTCCACAAGGCTCAAAGTGAGAATGCGAC
CACATCTAGGCCGCATTCTGAAGAAGGCCTAGTCGAGGCCACCGTTGATCAGCCAGCTGAAGAGGTTTTTGAGCCTCTATTCACGAATGACCCACCAGCTGCTGACAGCA
CCTCTTCAGGAGAGAAGAGGGACGAAGAAGAAAAGGAAGATGAGGAGGCCGAGACCTCCACTGACTCTCATACAAAATCCGATTCAGAGATAAGGGAGCTAGATGGTGAC
CAAAGGGCGAGGACGAGGTCCATGGACTCCTCTTCTACAGTTCCTCCTACCATCTCACTCGCCAAGCCAAAGGGCAAATCACCCAAGGCTGCATCTCCTAGAAATCTGTT
CCCTGAGGACTTCTGTGTTCACCCTCAGGAGGCTGTTGTGCCTCTAGTTCGAGAGTTTTACGCTGGCCTGAGGGAGGAGAGTATTAGCATGACGGTTGTGAGGGGAAGAT
GGAACCCTTCGGCCAAGCAAATGAAGGATGCATTAAAACTTGTGGCCAACAAGGGGGTCCAATGGAAAGAATCACAGACCAAAGTGAAGTCTTTAGTGTCAAGCGACCTA
AAGCCAGAATCGGCAGTTTGGCTTCACTTCATCAAGAACCGTTTGATGCCAACCACCCATGACAACATGATTTCAGTGGATAGAGTGATGCTACTCTATTGCCTTATGAA
GGGGGTGAAGATCATTCCGGGCAAGGACGAGGAGCGTCACTTCTTCAAGCCGACCATCGACCTGTCCTTGATCGGGAATCTCCAACAGAATAGTATCCAGAGGAAAGACA
AAGCCTCTACATCTCATGTTACTCCACCTGCAGGGTCGAATGTAGCTTCTCCATCCCTGCACACTCCTTTCACAAGGCCTTCACCATCGTCAGAAGCCCTAGCCATTGCC
TACCGCCAGCTAGATCAAATCAGGGAGAACCTGAAAACATATTGGGCATATGCAAAGGAGCGGGATGAAGTCATTAGAAAGTTCTATCTCTCTATTGCCCCAAGTATTGC
TCCGGTCTTTCCAAATTTCCCTCAGTCGCTGCTGCCCCAGGAAAAGAAGGATTCTGATGAAGAGGAAGATGAAGAGAATGAAGATGAAGAGAAAGAGAGTTCCTCGGACG
AGGAATAG
Protein sequenceShow/hide protein sequence
MPSSSTPRRFTHVAAVHQTQKPAAQQFKKRSREWFAMIREMGAQRRAVLEEEGNWQDEKKVAKAVGSSRQGKNSMGKVFEPSTNPSLSCRIKPVVTYSARKRSLKKNVPE
KLLEVKPFKTARMPPDVFEGIIGQAVANALAIAEGYKAEQDALKEIEDEREMENQKMVEEDELAKERDYEEDKRRREEEQEAERALEAEEVRKYEENLRRAAMDLQLLEE
EKRRREEIKEDEKRRKEAEDFFATFEPLHKAQSENATTSRPHSEEGLVEATVDQPAEEVFEPLFTNDPPAADSTSSGEKRDEEEKEDEEAETSTDSHTKSDSEIRELDGD
QRARTRSMDSSSTVPPTISLAKPKGKSPKAASPRNLFPEDFCVHPQEAVVPLVREFYAGLREESISMTVVRGRWNPSAKQMKDALKLVANKGVQWKESQTKVKSLVSSDL
KPESAVWLHFIKNRLMPTTHDNMISVDRVMLLYCLMKGVKIIPGKDEERHFFKPTIDLSLIGNLQQNSIQRKDKASTSHVTPPAGSNVASPSLHTPFTRPSPSSEALAIA
YRQLDQIRENLKTYWAYAKERDEVIRKFYLSIAPSIAPVFPNFPQSLLPQEKKDSDEEEDEENEDEEKESSSDEE