; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg026894 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026894
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold13:23498637..23501198
RNA-Seq ExpressionSpg026894
SyntenySpg026894
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]5.8e-0736.99Show/hide
Query:  LDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLC
        L  EA  W+ +IK ++MPT HD ++S  R++ + CI++ IP+D+  I+CD ++     P+G    P L+ +LC
Subjt:  LDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLC

PIN01433.1 hypothetical protein CDL12_26059 [Handroanthus impetiginosus]2.6e-0732.69Show/hide
Query:  ATCLDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQW
        + CLD  A+ W+ +I  R++PT H   ++  R + + CI+ G   D+G I+ DS+ Q+    +  ++ PSL+TKLC  AG+     +E+   R   D+  
Subjt:  ATCLDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQW

Query:  LERI
        + RI
Subjt:  LERI

PIN02048.1 hypothetical protein CDL12_25440 [Handroanthus impetiginosus]5.8e-0732.69Show/hide
Query:  ATCLDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQW
        + CLD  A+ W+ +I  R++PT+H   ++  R + + CI+ G  ID+G I+ DS+ Q+    +  ++  SL+TKLC  AG+    ++E+   R   D+  
Subjt:  ATCLDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQW

Query:  LERI
        + RI
Subjt:  LERI

XP_012847421.1 PREDICTED: uncharacterized protein LOC105967368 [Erythranthe guttata]5.8e-0732.47Show/hide
Query:  VMVFDKTVAFAPSIINLAFELPDEPETEGNAL-LSSQDEDLLAAVLATC--------------LDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCII
        V++ DK V +  + IN  F +P+ P      L L++  E+L+  +                  L  EA+ WM+++ NR+MPT   A    PR+  +  I+
Subjt:  VMVFDKTVAFAPSIINLAFELPDEPETEGNAL-LSSQDEDLLAAVLATC--------------LDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCII

Query:  KGIPIDLGPILCDSLRQTTYKPK-GVMFCPSLVTKLCRMAGLVPTTSDEVRAIR
        K  P+++G I+   +R+       G+MF PSL+T LC  AG VPT +D+ R IR
Subjt:  KGIPIDLGPILCDSLRQTTYKPK-GVMFCPSLVTKLCRMAGLVPTTSDEVRAIR

XP_016721754.1 nucleolar protein 58-like [Gossypium hirsutum]2.6e-0728.44Show/hide
Query:  LDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQWLER
        L ++++ W+H++  R+   TH+ ++++ R+  +  I+KG  ID+G IL   +     +  G++  PSLV  LC+  G+VP   +EV   +   ++ ++ER
Subjt:  LDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQWLER

Query:  ITQTHNIRI
        +T+  ++ I
Subjt:  ITQTHNIRI

TrEMBL top hitse value%identityAlignment
A0A1U8M891 nucleolar protein 58-like1.3e-0728.44Show/hide
Query:  LDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQWLER
        L ++++ W+H++  R+   TH+ ++++ R+  +  I+KG  ID+G IL   +     +  G++  PSLV  LC+  G+VP   +EV   +   ++ ++ER
Subjt:  LDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQWLER

Query:  ITQTHNIRI
        +T+  ++ I
Subjt:  ITQTHNIRI

A0A2G9G807 Uncharacterized protein1.3e-0732.69Show/hide
Query:  ATCLDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQW
        + CLD  A+ W+ +I  R++PT H   ++  R + + CI+ G   D+G I+ DS+ Q+    +  ++ PSL+TKLC  AG+     +E+   R   D+  
Subjt:  ATCLDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQW

Query:  LERI
        + RI
Subjt:  LERI

A0A2G9G9R6 Uncharacterized protein2.8e-0732.69Show/hide
Query:  ATCLDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQW
        + CLD  A+ W+ +I  R++PT+H   ++  R + + CI+ G  ID+G I+ DS+ Q+    +  ++  SL+TKLC  AG+    ++E+   R   D+  
Subjt:  ATCLDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQW

Query:  LERI
        + RI
Subjt:  LERI

A0A5D3DVQ6 Uncharacterized protein2.8e-0736.99Show/hide
Query:  LDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLC
        L  EA  W+ +IK ++MPT HD ++S  R++ + CI++ IP+D+  I+CD ++     P+G    P L+ +LC
Subjt:  LDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLC

A0A7J9DKN5 Uncharacterized protein6.3e-0730.1Show/hide
Query:  LDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQWLER
        L ++ + W +++  R+ P+TH  ++++ R+  +  I+KG  ID+G IL   +   T +   ++  PSLV  LC+  G+VP  S+EV       +   +ER
Subjt:  LDIEAEAWMHWIKNRIMPTTHDASLSIPRVVPVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQWLER

Query:  ITQ
        +T+
Subjt:  ITQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCAGGCCCCACCATCTAGAACAAGAGAAAGAGGGCTTCTGCTGCAGCCAAAGGAAAAGAGAAAGTTGTGGCGGGAAGAAATCGACAAAGTGATGGTGTTCGATAA
AACAGTCGCATTCGCTCCAAGCATCATCAACCTTGCCTTTGAGCTACCCGACGAACCTGAAACTGAAGGTAATGCACTGTTATCCTCGCAGGATGAGGATCTTCTGGCCG
CAGTCCTAGCTACGTGCCTGGACATTGAGGCCGAGGCATGGATGCACTGGATAAAGAACCGCATCATGCCCACAACGCATGATGCCAGTCTTTCAATCCCGCGGGTGGTC
CCCGTCTGTTGCATCATCAAAGGGATCCCCATTGACTTAGGCCCTATTCTTTGCGACTCCCTGCGCCAGACTACCTACAAGCCAAAGGGAGTCATGTTCTGCCCTAGTCT
CGTCACGAAGCTCTGTCGCATGGCCGGCCTTGTACCCACAACATCAGATGAAGTCAGGGCCATCCGGCAGACGTTCGATGACCAGTGGCTCGAGCGCATTACTCAGACGC
ACAACATTCGCATCCGCGCAGCCATTGTTCCTCTCCAAGATCCTGCCCCTACAGCCGAAGAGCAGCCTCCTACACCCGAGCCCCAAAAGAAGAAGAGACAAAAACAAATC
GCGGGCCGCAATCCCTCAGTCGCGACAAGGCACGTGCGAGAAGTTCCTCAAGCACAGGAAAATCCTGTATGCGCTCTAAATCAGCAAGCCTTGCCACCACTTCCATCATC
ACCTGTGCACCGGCCCAGTCCTCCTGAAGTGCGCGTGGAGACCGTGCATCAACTGCAGCAAGGCAATCCTACTGCATGCGACGCTCGCATCCCGCCTGACCAAATTCTTG
ATATCGACGAAGCGCGAGTGTTTGCCGAAATGCGGCGTCAACTTGAAGAAATCGTCGATCCCCTGTGCCAGCAGCAGAACGAGCTTTCCCAGCGCGTCAACACAGTGATG
GTATTTCTACTGTGCTGGACGAATTCTTTTGGAAGGTTGCCAGTTGCGCAAGAGCAATTCAGACACCCTCAATGGCAACCTAGACCAGATGGCGCAGGACCCTCCCAGCT
CAGCAAGCTTCTCCATCGTCCATCACACTCCAGTTTAAGTTTGGGGGACAATGGGGACATTGTCCAATTTAAGTTGGGGGTTGTTTCCTTGCCCAAGTTTTCTCCAGCGA
AGCGCAGATCCCAGAGCATAATTCGTACGATGATAGCTGGAAAGATGATCGCCCTGACGTATGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGCAGGCCCCACCATCTAGAACAAGAGAAAGAGGGCTTCTGCTGCAGCCAAAGGAAAAGAGAAAGTTGTGGCGGGAAGAAATCGACAAAGTGATGGTGTTCGATAA
AACAGTCGCATTCGCTCCAAGCATCATCAACCTTGCCTTTGAGCTACCCGACGAACCTGAAACTGAAGGTAATGCACTGTTATCCTCGCAGGATGAGGATCTTCTGGCCG
CAGTCCTAGCTACGTGCCTGGACATTGAGGCCGAGGCATGGATGCACTGGATAAAGAACCGCATCATGCCCACAACGCATGATGCCAGTCTTTCAATCCCGCGGGTGGTC
CCCGTCTGTTGCATCATCAAAGGGATCCCCATTGACTTAGGCCCTATTCTTTGCGACTCCCTGCGCCAGACTACCTACAAGCCAAAGGGAGTCATGTTCTGCCCTAGTCT
CGTCACGAAGCTCTGTCGCATGGCCGGCCTTGTACCCACAACATCAGATGAAGTCAGGGCCATCCGGCAGACGTTCGATGACCAGTGGCTCGAGCGCATTACTCAGACGC
ACAACATTCGCATCCGCGCAGCCATTGTTCCTCTCCAAGATCCTGCCCCTACAGCCGAAGAGCAGCCTCCTACACCCGAGCCCCAAAAGAAGAAGAGACAAAAACAAATC
GCGGGCCGCAATCCCTCAGTCGCGACAAGGCACGTGCGAGAAGTTCCTCAAGCACAGGAAAATCCTGTATGCGCTCTAAATCAGCAAGCCTTGCCACCACTTCCATCATC
ACCTGTGCACCGGCCCAGTCCTCCTGAAGTGCGCGTGGAGACCGTGCATCAACTGCAGCAAGGCAATCCTACTGCATGCGACGCTCGCATCCCGCCTGACCAAATTCTTG
ATATCGACGAAGCGCGAGTGTTTGCCGAAATGCGGCGTCAACTTGAAGAAATCGTCGATCCCCTGTGCCAGCAGCAGAACGAGCTTTCCCAGCGCGTCAACACAGTGATG
GTATTTCTACTGTGCTGGACGAATTCTTTTGGAAGGTTGCCAGTTGCGCAAGAGCAATTCAGACACCCTCAATGGCAACCTAGACCAGATGGCGCAGGACCCTCCCAGCT
CAGCAAGCTTCTCCATCGTCCATCACACTCCAGTTTAAGTTTGGGGGACAATGGGGACATTGTCCAATTTAAGTTGGGGGTTGTTTCCTTGCCCAAGTTTTCTCCAGCGA
AGCGCAGATCCCAGAGCATAATTCGTACGATGATAGCTGGAAAGATGATCGCCCTGACGTATGACTGA
Protein sequenceShow/hide protein sequence
MRQAPPSRTRERGLLLQPKEKRKLWREEIDKVMVFDKTVAFAPSIINLAFELPDEPETEGNALLSSQDEDLLAAVLATCLDIEAEAWMHWIKNRIMPTTHDASLSIPRVV
PVCCIIKGIPIDLGPILCDSLRQTTYKPKGVMFCPSLVTKLCRMAGLVPTTSDEVRAIRQTFDDQWLERITQTHNIRIRAAIVPLQDPAPTAEEQPPTPEPQKKKRQKQI
AGRNPSVATRHVREVPQAQENPVCALNQQALPPLPSSPVHRPSPPEVRVETVHQLQQGNPTACDARIPPDQILDIDEARVFAEMRRQLEEIVDPLCQQQNELSQRVNTVM
VFLLCWTNSFGRLPVAQEQFRHPQWQPRPDGAGPSQLSKLLHRPSHSSLSLGDNGDIVQFKLGVVSLPKFSPAKRRSQSIIRTMIAGKMIALTYD